MedBlast(0.8) Results
| Hit | Evalue | SeqType | References |
| Z48613 | 0.0 | N | |
| M25779 | 0.0 | N | |
| AF004911 | 0.0 | N | |
| NP_013726 | 0.0 | P | |
| P20048 | 0.0 | P | |
| JQ0124 | 0.0 | P | |
| AAA35033 | 0.0 | P | |
| CAA88530 | 0.0 | P | |
| NP_587983 | 2e-29 | P | |
| T41511 | 2e-29 | P | |
| CAB40014 | 2e-29 | P | |
| NP_055723 | 3e-29 | P | |
| Q9UPQ8 | 3e-29 | P | |
| BAA83046 | 3e-29 | P | |
| AAH35556 | 3e-29 | P | |
| XP_231121 | 3e-29 | P | |
| XP_130156 | 3e-29 | P | |
| AAH26973 | 3e-29 | P | |
| NP_190090 | 3e-21 | P |
References Summary:
| Hit | Evalue | SeqType | References |
| Z48613 | 0.0 | N |
|
| M25779 | 0.0 | N |
|
| AF004911 | 0.0 | N | |
| NP_013726 | 0.0 | P |
|
| P20048 | 0.0 | P | |
| JQ0124 | 0.0 | P | |
| AAA35033 | 0.0 | P |
|
| CAA88530 | 0.0 | P |
|
| NP_587983 | 2e-29 | P | |
| T41511 | 2e-29 | P | |
| CAB40014 | 2e-29 | P | |
| NP_055723 | 3e-29 | P |
|
| Q9UPQ8 | 3e-29 | P | |
| BAA83046 | 3e-29 | P |
|
| AAH35556 | 3e-29 | P | |
| XP_231121 | 3e-29 | P |
|
| XP_130156 | 3e-29 | P |
|
| AAH26973 | 3e-29 | P | |
| NP_190090 | 3e-21 | P |
|
References Summary:
BLASTN 2.2.5 [Nov-16-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1048225009-05661-14868 Query= (1560 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS, or phase 0, 1 or 2 HTGS sequences) 1,706,607 sequences; 7,920,131,457 total letters Score E Sequences producing significant alignments: (bits) Value gi|728645|emb|Z48613.1|SC8270 S.cerevisiae chromosome XIII cosmi... 3045 0.0 gi|172567|gb|M25779.1|YSCSEC59A S.cerevisiae SEC59 gene, complet... 3045 0.0 gi|2580604|gb|AF004911.1|AF004911 Saccharomyces cerevisiae trans... 2781 0.0 gi|22655826|gb|AC099689.4| Homo sapiens chromosome 18, clone RP1... 50 0.010 gi|24418173|gb|AC126121.2| Homo sapiens chromosome 3 clone RP11-... 44 0.64 gi|21240566|gb|AC018361.15| Homo sapiens 3 BAC RP11-41O13 (Roswe... 44 0.64 gi|2688571|gb|AE001166.1| Borrelia burgdorferi B31 (section 52 o... 42 2.5 gi|5701579|gb|U80440.2| Caenorhabditis elegans cosmid T21E12, co... 42 2.5 gi|2384920|gb|AF022983.1| Caenorhabditis elegans cosmid R13D11, ... 42 2.5 gi|23354976|gb|AC133680.2| Homo sapiens 3 BAC RP11-102C20 (Roswe... 42 2.5 gi|3165399|gb|AC003684.1| Homo sapiens X BAC GS1-519E5 (Genome S... 42 2.5 gi|21260589|gb|AY099355.1| Schistosoma japonicum MF-19 protein m... 42 2.5 gi|13435186|gb|AC078958.30| Homo sapiens X BAC RP11-609C15 (Rosw... 42 2.5 gi|18308293|gb|AC105900.2| Homo sapiens chromosome 3 clone RP11-... 42 2.5 gi|15668129|gb|AC019186.9| Homo sapiens BAC clone RP11-301K6 fro... 42 2.5 gi|27803214|emb|AL929349.8| Zebrafish DNA sequence from clone CH... 42 2.5 gi|11094889|gb|AC084439.1|AC084439 Caenorhabditis briggsae cosmi... 42 2.5 gi|28570004|dbj|AP005816.2| Oryza sativa (japonica cultivar-grou... 42 2.5 gi|18642374|emb|AL590676.11| Human DNA sequence from clone RP11-... 42 2.5 gi|23586318|dbj|AK114688.1| Ciona intestinalis cDNA, clone:cieg0... 42 2.5 gi|20804507|dbj|AP003197.4| Oryza sativa (japonica cultivar-grou... 42 2.5 gi|495016|gb|L33260.1|CELDYNEINH Caenorhabditis elegans dynein h... 42 2.5 gi|18857805|emb|AL365203.19| Human DNA sequence from clone RP11-... 42 2.5 ALIGNMENTS >gi|728645|emb|Z48613.1|SC8270 S.cerevisiae chromosome XIII cosmid 8270 Length = 32481 Score = 3045 bits (1536), Expect = 0.0 Identities = 1552/1560 (99%) Strand = Plus / Minus Query: 1 atggtcgctataatacctcatgcttcctttaccacaattaaactaacccagaaaactgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31451 atggtcgctataatacctcatgcttcctttaccacaattaaactaacccagaaaactgag 31392 Query: 61 ggaagccaaatgccaactgaggagatctgcaaaatcaatatgaggactcgtaaatttgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31391 ggaagccaaatgccaactgaggagatctgcaaaatcaatatgaggactcgtaaatttgat 31332 Query: 121 gtgggcgggaattctcgagattttgagtgcttttattcgaattttgttcaaactgttata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31331 gtgggcgggaattctcgagattttgagtgcttttattcgaattttgttcaaactgttata 31272 Query: 181 ttgttgggcacnnnnnnnnactgtgttgaaaggcttcagccgtggtccattgttaccgct 240 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 31271 ttgttgggcacttttttttactgtgttgaaaggcttcagccgtggtccattgttaccgct 31212 Query: 241 gatatatcttataaacaaatctttgtaaatgtctttgtggtgtgtttgataatggttggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31211 gatatatcttataaacaaatctttgtaaatgtctttgtggtgtgtttgataatggttggt 31152 Query: 301 ctgatattcacaaaatattggcaacatggttacaaaagcctacccaagttcgataccatt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31151 ctgatattcacaaaatattggcaacatggttacaaaagcctacccaagttcgataccatt 31092 Query: 361 tacagtttatatttaccgtttatggtttcgttgttgttcgatacatcatctacggtgata 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31091 tacagtttatatttaccgtttatggtttcgttgttgttcgatacatcatctacggtgata 31032 Query: 421 aatactattttgatcctttcggtattaaattcatatagatggcgaactcagttggtagtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31031 aatactattttgatcctttcggtattaaattcatatagatggcgaactcagttggtagtg 30972 Query: 481 atcattttacagctctgcctcatattttttaattttgaggctggtgacaggttaaagaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30971 atcattttacagctctgcctcatattttttaattttgaggctggtgacaggttaaagaat 30912 Query: 541 attattagcatagtaataaattctttactgtcgttaattttgaagtatattgggcaattg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30911 attattagcatagtaataaattctttactgtcgttaattttgaagtatattgggcaattg 30852 Query: 601 aaaagtttagataatatcgactctaatctttttagtatcctattaaccaatattctgtac 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30851 aaaagtttagataatatcgactctaatctttttagtatcctattaaccaatattctgtac 30792 Query: 661 gtttcagaggctggcacagtacattttagaattttgaagggcattatccttgctctcaca 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30791 gtttcagaggctggcacagtacattttagaattttgaagggcattatccttgctctcaca 30732 Query: 721 acaataatttcaattaactatgtgctcaaaaaggtaatgcactttaaaccgtttatgctg 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30731 acaataatttcaattaactatgtgctcaaaaaggtaatgcactttaaaccgtttatgctg 30672 Query: 781 tcaatatcctttgccatcgggcttccactttttgccaataccttcattcatttagaagac 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30671 tcaatatcctttgccatcgggcttccactttttgccaataccttcattcatttagaagac 30612 Query: 841 ggtgaaaatccgctactttggctggtaaaatatatcttagagtctactattcgtcaaaag 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30611 ggtgaaaatccgctactttggctggtaaaatatatcttagagtctactattcgtcaaaag 30552 Query: 901 attttgtttgcttggtcttcaattcttatactgtccataccaagtatattgatcgagaag 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30551 attttgtttgcttggtcttcaattcttatactgtccataccaagtatattgatcgagaag 30492 Query: 961 gacagtctatcgttgaacacctcccgaaaattgtggcatttcatcattttcttactcata 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30491 gacagtctatcgttgaacacctcccgaaaattgtggcatttcatcattttcttactcata 30432 Query: 1021 ataccgtcattccaaatggattcaaactttgtgaaaattgcattgtccggaacaatacca 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30431 ataccgtcattccaaatggattcaaactttgtgaaaattgcattgtccggaacaatacca 30372 Query: 1081 gtcttcttatcaattgagtacataagatttcaaaacctaccgccgttaggatctgctatt 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30371 gtcttcttatcaattgagtacataagatttcaaaacctaccgccgttaggatctgctatt 30312 Query: 1141 gaattacaactaagaaggtttgctgatgatagggaccacagcgggccattgatcatatca 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30311 gaattacaactaagaaggtttgctgatgatagggaccacagcgggccattgatcatatca 30252 Query: 1201 tacctttatttactcttcggaatatcaacacctttattaatgaataactctccaatgggt 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30251 tacctttatttactcttcggaatatcaacacctttattaatgaataactctccaatgggt 30192 Query: 1261 ctaataggattgggaattggtgattccttagcatctattattggtaaaaggtatggccgc 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30191 ctaataggattgggaattggtgattccttagcatctattattggtaaaaggtatggccgc 30132 Query: 1321 attcgttggaaaggtacacaaaaaactttagagggaactcttgcgtttatagtaacgagt 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30131 attcgttggaaaggtacacaaaaaactttagagggaactcttgcgtttatagtaacgagt 30072 Query: 1381 tttatcgtttgtttggtattgttacgttttgataaagctgcaatttttaaccacctaact 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30071 tttatcgtttgtttggtattgttacgttttgataaagctgcaatttttaaccacctaact 30012 Query: 1441 actttacaattgcttaccctttgtacactgagtggagtgctagaaggtaatagtgtgctt 1500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30011 actttacaattgcttaccctttgtacactgagtggagtgctagaaggtaatagtgtgctt 29952 Query: 1501 aatgacaatattttgatacctgcatttatgatgatttgtgaaaaattaattactctttga 1560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29951 aatgacaatattttgatacctgcatttatgatgatttgtgaaaaattaattactctttga 29892 >gi|172567|gb|M25779.1|YSCSEC59A S.cerevisiae SEC59 gene, complete cds Length = 2197 Score = 3045 bits (1536), Expect = 0.0 Identities = 1552/1560 (99%) Strand = Plus / Plus Query: 1 atggtcgctataatacctcatgcttcctttaccacaattaaactaacccagaaaactgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 atggtcgctataatacctcatgcttcctttaccacaattaaactaacccagaaaactgag 303 Query: 61 ggaagccaaatgccaactgaggagatctgcaaaatcaatatgaggactcgtaaatttgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 ggaagccaaatgccaactgaggagatctgcaaaatcaatatgaggactcgtaaatttgat 363 Query: 121 gtgggcgggaattctcgagattttgagtgcttttattcgaattttgttcaaactgttata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 gtgggcgggaattctcgagattttgagtgcttttattcgaattttgttcaaactgttata 423 Query: 181 ttgttgggcacnnnnnnnnactgtgttgaaaggcttcagccgtggtccattgttaccgct 240 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 ttgttgggcacttttttttactgtgttgaaaggcttcagccgtggtccattgttaccgct 483 Query: 241 gatatatcttataaacaaatctttgtaaatgtctttgtggtgtgtttgataatggttggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 gatatatcttataaacaaatctttgtaaatgtctttgtggtgtgtttgataatggttggt 543 Query: 301 ctgatattcacaaaatattggcaacatggttacaaaagcctacccaagttcgataccatt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 ctgatattcacaaaatattggcaacatggttacaaaagcctacccaagttcgataccatt 603 Query: 361 tacagtttatatttaccgtttatggtttcgttgttgttcgatacatcatctacggtgata 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 604 tacagtttatatttaccgtttatggtttcgttgttgttcgatacatcatctacggtgata 663 Query: 421 aatactattttgatcctttcggtattaaattcatatagatggcgaactcagttggtagtg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 664 aatactattttgatcctttcggtattaaattcatatagatggcgaactcagttggtagtg 723 Query: 481 atcattttacagctctgcctcatattttttaattttgaggctggtgacaggttaaagaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 atcattttacagctctgcctcatattttttaattttgaggctggtgacaggttaaagaat 783 Query: 541 attattagcatagtaataaattctttactgtcgttaattttgaagtatattgggcaattg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 attattagcatagtaataaattctttactgtcgttaattttgaagtatattgggcaattg 843 Query: 601 aaaagtttagataatatcgactctaatctttttagtatcctattaaccaatattctgtac 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 aaaagtttagataatatcgactctaatctttttagtatcctattaaccaatattctgtac 903 Query: 661 gtttcagaggctggcacagtacattttagaattttgaagggcattatccttgctctcaca 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 904 gtttcagaggctggcacagtacattttagaattttgaagggcattatccttgctctcaca 963 Query: 721 acaataatttcaattaactatgtgctcaaaaaggtaatgcactttaaaccgtttatgctg 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 964 acaataatttcaattaactatgtgctcaaaaaggtaatgcactttaaaccgtttatgctg 1023 Query: 781 tcaatatcctttgccatcgggcttccactttttgccaataccttcattcatttagaagac 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1024 tcaatatcctttgccatcgggcttccactttttgccaataccttcattcatttagaagac 1083 Query: 841 ggtgaaaatccgctactttggctggtaaaatatatcttagagtctactattcgtcaaaag 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1084 ggtgaaaatccgctactttggctggtaaaatatatcttagagtctactattcgtcaaaag 1143 Query: 901 attttgtttgcttggtcttcaattcttatactgtccataccaagtatattgatcgagaag 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1144 attttgtttgcttggtcttcaattcttatactgtccataccaagtatattgatcgagaag 1203 Query: 961 gacagtctatcgttgaacacctcccgaaaattgtggcatttcatcattttcttactcata 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1204 gacagtctatcgttgaacacctcccgaaaattgtggcatttcatcattttcttactcata 1263 Query: 1021 ataccgtcattccaaatggattcaaactttgtgaaaattgcattgtccggaacaatacca 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1264 ataccgtcattccaaatggattcaaactttgtgaaaattgcattgtccggaacaatacca 1323 Query: 1081 gtcttcttatcaattgagtacataagatttcaaaacctaccgccgttaggatctgctatt 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1324 gtcttcttatcaattgagtacataagatttcaaaacctaccgccgttaggatctgctatt 1383 Query: 1141 gaattacaactaagaaggtttgctgatgatagggaccacagcgggccattgatcatatca 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1384 gaattacaactaagaaggtttgctgatgatagggaccacagcgggccattgatcatatca 1443 Query: 1201 tacctttatttactcttcggaatatcaacacctttattaatgaataactctccaatgggt 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1444 tacctttatttactcttcggaatatcaacacctttattaatgaataactctccaatgggt 1503 Query: 1261 ctaataggattgggaattggtgattccttagcatctattattggtaaaaggtatggccgc 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1504 ctaataggattgggaattggtgattccttagcatctattattggtaaaaggtatggccgc 1563 Query: 1321 attcgttggaaaggtacacaaaaaactttagagggaactcttgcgtttatagtaacgagt 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1564 attcgttggaaaggtacacaaaaaactttagagggaactcttgcgtttatagtaacgagt 1623 Query: 1381 tttatcgtttgtttggtattgttacgttttgataaagctgcaatttttaaccacctaact 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1624 tttatcgtttgtttggtattgttacgttttgataaagctgcaatttttaaccacctaact 1683 Query: 1441 actttacaattgcttaccctttgtacactgagtggagtgctagaaggtaatagtgtgctt 1500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1684 actttacaattgcttaccctttgtacactgagtggagtgctagaaggtaatagtgtgctt 1743 Query: 1501 aatgacaatattttgatacctgcatttatgatgatttgtgaaaaattaattactctttga 1560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1744 aatgacaatattttgatacctgcatttatgatgatttgtgaaaaattaattactctttga 1803 >gi|2580604|gb|AF004911.1|AF004911 Saccharomyces cerevisiae translation initiation factor eIF3, p135 subunit (TIF31) gene, complete cds Length = 7224 Score = 2781 bits (1403), Expect = 0.0 Identities = 1419/1427 (99%) Strand = Plus / Minus Query: 134 ctcgagattttgagtgcttttattcgaattttgttcaaactgttatattgttgggcacnn 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7224 ctcgagattttgagtgcttttattcgaattttgttcaaactgttatattgttgggcactt 7165 Query: 194 nnnnnnactgtgttgaaaggcttcagccgtggtccattgttaccgctgatatatcttata 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7164 ttttttactgtgttgaaaggcttcagccgtggtccattgttaccgctgatatatcttata 7105 Query: 254 aacaaatctttgtaaatgtctttgtggtgtgtttgataatggttggtctgatattcacaa 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7104 aacaaatctttgtaaatgtctttgtggtgtgtttgataatggttggtctgatattcacaa 7045 Query: 314 aatattggcaacatggttacaaaagcctacccaagttcgataccatttacagtttatatt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7044 aatattggcaacatggttacaaaagcctacccaagttcgataccatttacagtttatatt 6985 Query: 374 taccgtttatggtttcgttgttgttcgatacatcatctacggtgataaatactattttga 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6984 taccgtttatggtttcgttgttgttcgatacatcatctacggtgataaatactattttga 6925 Query: 434 tcctttcggtattaaattcatatagatggcgaactcagttggtagtgatcattttacagc 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6924 tcctttcggtattaaattcatatagatggcgaactcagttggtagtgatcattttacagc 6865 Query: 494 tctgcctcatattttttaattttgaggctggtgacaggttaaagaatattattagcatag 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6864 tctgcctcatattttttaattttgaggctggtgacaggttaaagaatattattagcatag 6805 Query: 554 taataaattctttactgtcgttaattttgaagtatattgggcaattgaaaagtttagata 613 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6804 taataaattctttactgtcgttaattttgaagtatattgggcaattgaaaagtttagata 6745 Query: 614 atatcgactctaatctttttagtatcctattaaccaatattctgtacgtttcagaggctg 673 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6744 atatcgactctaatctttttagtatcctattaaccaatattctgtacgtttcagaggctg 6685 Query: 674 gcacagtacattttagaattttgaagggcattatccttgctctcacaacaataatttcaa 733 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6684 gcacagtacattttagaattttgaagggcattatccttgctctcacaacaataatttcaa 6625 Query: 734 ttaactatgtgctcaaaaaggtaatgcactttaaaccgtttatgctgtcaatatcctttg 793 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6624 ttaactatgtgctcaaaaaggtaatgcactttaaaccgtttatgctgtcaatatcctttg 6565 Query: 794 ccatcgggcttccactttttgccaataccttcattcatttagaagacggtgaaaatccgc 853 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6564 ccatcgggcttccactttttgccaataccttcattcatttagaagacggtgaaaatccgc 6505 Query: 854 tactttggctggtaaaatatatcttagagtctactattcgtcaaaagattttgtttgctt 913 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6504 tactttggctggtaaaatatatcttagagtctactattcgtcaaaagattttgtttgctt 6445 Query: 914 ggtcttcaattcttatactgtccataccaagtatattgatcgagaaggacagtctatcgt 973 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6444 ggtcttcaattcttatactgtccataccaagtatattgatcgagaaggacagtctatcgt 6385 Query: 974 tgaacacctcccgaaaattgtggcatttcatcattttcttactcataataccgtcattcc 1033 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6384 tgaacacctcccgaaaattgtggcatttcatcattttcttactcataataccgtcattcc 6325 Query: 1034 aaatggattcaaactttgtgaaaattgcattgtccggaacaataccagtcttcttatcaa 1093 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6324 aaatggattcaaactttgtgaaaattgcattgtccggaacaataccagtcttcttatcaa 6265 Query: 1094 ttgagtacataagatttcaaaacctaccgccgttaggatctgctattgaattacaactaa 1153 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6264 ttgagtacataagatttcaaaacctaccgccgttaggatctgctattgaattacaactaa 6205 Query: 1154 gaaggtttgctgatgatagggaccacagcgggccattgatcatatcatacctttatttac 1213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6204 gaaggtttgctgatgatagggaccacagcgggccattgatcatatcatacctttatttac 6145 Query: 1214 tcttcggaatatcaacacctttattaatgaataactctccaatgggtctaataggattgg 1273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6144 tcttcggaatatcaacacctttattaatgaataactctccaatgggtctaataggattgg 6085 Query: 1274 gaattggtgattccttagcatctattattggtaaaaggtatggccgcattcgttggaaag 1333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6084 gaattggtgattccttagcatctattattggtaaaaggtatggccgcattcgttggaaag 6025 Query: 1334 gtacacaaaaaactttagagggaactcttgcgtttatagtaacgagttttatcgtttgtt 1393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6024 gtacacaaaaaactttagagggaactcttgcgtttatagtaacgagttttatcgtttgtt 5965 Query: 1394 tggtattgttacgttttgataaagctgcaatttttaaccacctaactactttacaattgc 1453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5964 tggtattgttacgttttgataaagctgcaatttttaaccacctaactactttacaattgc 5905 Query: 1454 ttaccctttgtacactgagtggagtgctagaaggtaatagtgtgcttaatgacaatattt 1513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5904 ttaccctttgtacactgagtggagtgctagaaggtaatagtgtgcttaatgacaatattt 5845 Query: 1514 tgatacctgcatttatgatgatttgtgaaaaattaattactctttga 1560 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5844 tgatacctgcatttatgatgatttgtgaaaaattaattactctttga 5798 >gi|22655826|gb|AC099689.4| Homo sapiens chromosome 18, clone RP11-849I19, complete sequence Length = 201519 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 987 aaaattgtggcatttcatcattttcttac 1015 |||||||| |||||||||||||||||||| Sbjct: 125649 aaaattgttgcatttcatcattttcttac 125621 >gi|24418173|gb|AC126121.2| Homo sapiens chromosome 3 clone RP11-719N22, complete sequence Length = 215273 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Minus Query: 357 catttacagtttatatttaccgttta 382 |||||||||||||||||||| ||||| Sbjct: 161022 catttacagtttatatttacagttta 160997 >gi|21240566|gb|AC018361.15| Homo sapiens 3 BAC RP11-41O13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146511 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Plus Query: 353 ataccatttacagtttatattt 374 |||||||||||||||||||||| Sbjct: 43607 ataccatttacagtttatattt 43628 >gi|2688571|gb|AE001166.1| Borrelia burgdorferi B31 (section 52 of 70) of the complete genome Length = 13990 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1539 tgaaaaattaattactctttg 1559 ||||||||||||||||||||| Sbjct: 11037 tgaaaaattaattactctttg 11017 >gi|5701579|gb|U80440.2| Caenorhabditis elegans cosmid T21E12, complete sequence Length = 36120 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 attttgagtgcttttattcga 160 ||||||||||||||||||||| Sbjct: 22573 attttgagtgcttttattcga 22593 >gi|2384920|gb|AF022983.1| Caenorhabditis elegans cosmid R13D11, complete sequence Length = 39711 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 561 ttctttactgtcgttaatttt 581 ||||||||||||||||||||| Sbjct: 28751 ttctttactgtcgttaatttt 28771 >gi|23354976|gb|AC133680.2| Homo sapiens 3 BAC RP11-102C20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 130370 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1099 tacataagatttcaaaaccta 1119 ||||||||||||||||||||| Sbjct: 103121 tacataagatttcaaaaccta 103141 >gi|3165399|gb|AC003684.1| Homo sapiens X BAC GS1-519E5 (Genome Systems Human BAC library) complete sequence Length = 210954 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 aaactgagggaagccaaatgc 73 ||||||||||||||||||||| Sbjct: 177229 aaactgagggaagccaaatgc 177249 >gi|21260589|gb|AY099355.1| Schistosoma japonicum MF-19 protein mRNA, complete cds Length = 461 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 718 acaacaataatttcaattaac 738 ||||||||||||||||||||| Sbjct: 301 acaacaataatttcaattaac 281 >gi|13435186|gb|AC078958.30| Homo sapiens X BAC RP11-609C15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187547 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1046 actttgtgaaaattgcattgt 1066 ||||||||||||||||||||| Sbjct: 117932 actttgtgaaaattgcattgt 117952 >gi|18308293|gb|AC105900.2| Homo sapiens chromosome 3 clone RP11-30P17, complete sequence Length = 148377 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1099 tacataagatttcaaaaccta 1119 ||||||||||||||||||||| Sbjct: 125675 tacataagatttcaaaaccta 125655 >gi|15668129|gb|AC019186.9| Homo sapiens BAC clone RP11-301K6 from 2, complete sequence Length = 167101 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1095 tgagtacataagatttcaaaa 1115 ||||||||||||||||||||| Sbjct: 123110 tgagtacataagatttcaaaa 123130 >gi|27803214|emb|AL929349.8| Zebrafish DNA sequence from clone CH211-207D24 in linkage group 20, complete sequence Length = 82317 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 292 atggttggtctgatattcacaaaat 316 |||||||||||||| |||||||||| Sbjct: 35008 atggttggtctgattttcacaaaat 35032 >gi|11094889|gb|AC084439.1|AC084439 Caenorhabditis briggsae cosmid CB005A09, complete sequence Length = 82884 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 732 aattaactatgtgctcaaaaa 752 ||||||||||||||||||||| Sbjct: 75791 aattaactatgtgctcaaaaa 75771 >gi|28570004|dbj|AP005816.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1168A08, complete sequence Length = 91200 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 718 acaacaataatttcaattaac 738 ||||||||||||||||||||| Sbjct: 8042 acaacaataatttcaattaac 8062 >gi|18642374|emb|AL590676.11| Human DNA sequence from clone RP11-291J9 on chromosome 9, complete sequence Length = 149114 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1006 attttcttactcataataccgtcat 1030 ||||||||| ||||||||||||||| Sbjct: 42598 attttcttaatcataataccgtcat 42622 >gi|23586318|dbj|AK114688.1| Ciona intestinalis cDNA, clone:cieg011e21, full insert sequence Length = 1378 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 gaattttgttcaaactgttatattg 183 |||||||||||||||||| |||||| Sbjct: 1129 gaattttgttcaaactgtgatattg 1153 >gi|20804507|dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1015E06 Length = 164583 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1048 tttgtgaaaattgcattgtcc 1068 ||||||||||||||||||||| Sbjct: 37668 tttgtgaaaattgcattgtcc 37648 >gi|495016|gb|L33260.1|CELDYNEINH Caenorhabditis elegans dynein heavy chain gene exons 1-15, complete cds Length = 35103 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 attttgagtgcttttattcga 160 ||||||||||||||||||||| Sbjct: 26625 attttgagtgcttttattcga 26645 >gi|18857805|emb|AL365203.19| Human DNA sequence from clone RP11-479G22 on chromosome 10, complete sequence Length = 197973 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1005 cattttcttactcataatacc 1025 ||||||||||||||||||||| Sbjct: 123246 cattttcttactcataatacc 123226 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS, or phase 0, 1 or 2 HTGS sequences) Posted date: Mar 19, 2003 10:12 PM Number of letters in database: -669,803,131 Number of sequences in database: 1,706,607 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,068,674 Number of Sequences: 1706607 Number of extensions: 8068674 Number of successful extensions: 45855 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 45813 Number of HSP's gapped (non-prelim): 42 length of query: 1560 length of database: 7,920,131,457 effective HSP length: 22 effective length of query: 1538 effective length of database: 7,882,586,103 effective search space: 12123417426414 effective search space used: 12123417426414 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)
BLASTX 2.2.5 [Nov-16-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1048225019-05709-8449 Query= (1560 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,375,764 sequences; 441,946,756 total letters Score E Sequences producing significant alignments: (bits) Value gi|6323655|ref|NP_013726.1| catalyzes the CTP-mediated phosphory... 902 0.0 gi|19075483|ref|NP_587983.1| putative dolichol kinase [Schizosac... 132 2e-29 gi|7662482|ref|NP_055723.1| KIAA1094 protein [Homo sapiens] >gi|... 131 3e-29 gi|27706618|ref|XP_231121.1| similar to Hypothetical protein KIA... 131 3e-29 gi|20823764|ref|XP_130156.1| similar to Hypothetical protein KIA... 131 3e-29 gi|22331608|ref|NP_190090.2| putative protein; protein id: At3g4... 105 3e-21 gi|18389248|gb|AAL67067.1| unknown protein [Arabidopsis thaliana] 102 2e-20 gi|16944701|emb|CAC28826.2| conserved hypothetical protein [Neur... 97 5e-19 gi|28922656|gb|EAA31881.1| hypothetical protein ( (AL513466) con... 97 5e-19 gi|24654201|ref|NP_611139.1| CG8311-PA [Drosophila melanogaster]... 94 6e-18 gi|11357412|pir||T48980 hypothetical protein F14D17.110 - Arabid... 91 4e-17 gi|21295576|gb|EAA07721.1| agCP1878 [Anopheles gambiae str. PEST] 73 1e-11 gi|23613456|ref|NP_703300.1| hypothetical integral membrane prot... 56 2e-06 gi|15606682|ref|NP_214062.1| putative protein [Aquifex aeolicus]... 56 2e-06 gi|21912578|emb|CAD21544.1| putative dolichol kinase [Taenia sol... 50 8e-05 gi|16332229|ref|NP_442957.1| unknown protein [Synechocystis sp. ... 48 4e-04 gi|28850457|gb|AAO53220.1| similar to Oryza sativa (japonica cul... 47 8e-04 gi|17229102|ref|NP_485650.1| hypothetical protein [Nostoc sp. PC... 45 0.002 gi|14521419|ref|NP_126895.1| hypothetical protein [Pyrococcus ab... 45 0.004 gi|14590788|ref|NP_142858.1| hypothetical protein [Pyrococcus ho... 44 0.005 gi|23022090|ref|ZP_00061721.1| hypothetical protein [Clostridium... 44 0.007 gi|19074144|ref|NP_584750.1| similarity with dolichol kinase SC5... 44 0.007 gi|23128088|gb|ZP_00109944.1| hypothetical protein [Nostoc punct... 43 0.016 gi|24214587|ref|NP_712068.1| conserved hypothetical protein [Lep... 42 0.035 gi|21674801|ref|NP_662866.1| conserved hypothetical protein [Chl... 41 0.046 gi|20090858|ref|NP_616933.1| integral membrane protein [Methanos... 41 0.060 gi|21226333|ref|NP_632255.1| hypothetical protein [Methanosarcin... 40 0.078 gi|11498907|ref|NP_070138.1| conserved hypothetical protein [Arc... 39 0.17 gi|15669324|ref|NP_248129.1| conserved hypothetical protein [Met... 39 0.30 gi|15679110|ref|NP_276227.1| conserved protein [Methanothermobac... 39 0.30 gi|18977532|ref|NP_578889.1| hypothetical protein [Pyrococcus fu... 38 0.39 gi|21674531|ref|NP_662596.1| membrane protein [Chlorobium tepidu... 38 0.39 gi|22299582|ref|NP_682829.1| ORF_ID:tll2039~hypothetical protein... 38 0.39 gi|23039986|gb|ZP_00071525.1| hypothetical protein [Trichodesmiu... 37 0.66 gi|22971499|gb|ZP_00018451.1| hypothetical protein [Chloroflexus... 37 0.86 gi|27467427|ref|NP_764064.1| di-tripepride ABC transporter [Stap... 37 1.1 gi|15679372|ref|NP_276489.1| conserved protein [Methanothermobac... 37 1.1 gi|16660391|gb|AAL27558.1|AF425229_3 vanillate transporter VanK ... 36 1.9 gi|24379986|ref|NP_721941.1| putative MDR permease; possible tra... 36 1.9 gi|26006809|sp|Q9ER47|KCH7_MOUSE Potassium voltage-gated channel... 35 2.5 gi|18777774|ref|NP_571987.1| potassium channel erg3 [Rattus norv... 35 2.5 gi|23597578|ref|XP_130310.2| potassium channel protein erg3 [Mus... 35 2.5 gi|26329609|dbj|BAC28543.1| unnamed protein product [Mus musculus] 35 2.5 gi|23134842|ref|ZP_00116616.1| hypothetical protein [Synechococc... 35 3.3 gi|23129304|gb|ZP_00111136.1| hypothetical protein [Nostoc punct... 35 3.3 gi|11362587|pir||T45229 probable F420H2-dehydrogenase [imported]... 35 4.3 gi|26990446|ref|NP_745871.1| major facilitator family transporte... 35 4.3 gi|23491329|gb|EAA22892.1| hypothetical protein [Plasmodium yoel... 34 7.3 gi|22405501|gb|ZP_00000381.1| hypothetical protein [Ferroplasma ... 34 7.3 gi|26006811|sp|Q9NS40|KCH7_HUMAN Potassium voltage-gated channel... 34 7.3 gi|27886653|ref|NP_150375.2| potassium voltage-gated channel, su... 34 7.3 ALIGNMENTS >gi|6323655|ref|NP_013726.1| catalyzes the CTP-mediated phosphorylation of dolichol, the terminal step in dolichyl monophosphate (Dol-P) biosynthesis. required for viability, normal rates of lipid intermediate synthesis, protein N-glycosylation.; Sec59p [Saccharomyces cerevisiae] gi|134286|sp|P20048|SC59_YEAST Dolichol kinase gi|83526|pir||JQ0124 membrane protein SEC59 - yeast (Saccharomyces cerevisiae) gi|172568|gb|AAA35033.1| SEC59 gi|728662|emb|CAA88530.1| Sec59p [Saccharomyces cerevisiae] Length = 519 Score = 902 bits (2330), Expect = 0.0 Identities = 464/519 (89%), Positives = 464/519 (89%) Frame = +1 Query: 1 MVAIIPHASFTTIKLTQKTEGSQMPTEEICKINMRTRKFDVGGNSRDFECFYSNFVQTVI 180 MVAIIPHASFTTIKLTQKTEGSQMPTEEICKINMRTRKFDVGGNSRDFECFYSNFVQTVI Sbjct: 1 MVAIIPHASFTTIKLTQKTEGSQMPTEEICKINMRTRKFDVGGNSRDFECFYSNFVQTVI 60 Query: 181 LLGTFFYCVERLQPWSIVTADISYKQIFVNVFVVCLIMVGLIFTKYWQHGYKSLPKFDTI 360 LLGTFFYCVERLQPWSIVTADISYKQIFVNVFVVCLIMVGLIFTKYWQHGYKSLPKFDTI Sbjct: 61 LLGTFFYCVERLQPWSIVTADISYKQIFVNVFVVCLIMVGLIFTKYWQHGYKSLPKFDTI 120 Query: 361 YSLYLPFMVSLLFDTSSTVINTILILSVLNSYRWRTXXXXXXXXXXXXFFNFEAGDRXXX 540 YSLYLPFMVSLLFDTSSTVINTILILSVLNSYRWRT FFNFEAGDR Sbjct: 121 YSLYLPFMVSLLFDTSSTVINTILILSVLNSYRWRTQLVVIILQLCLIFFNFEAGDRLKN 180 Query: 541 XXXXXXXXXXXXXXXYIGQLKSLDNIDSNLFSILLTNILYVSEAGTVHFRILKGIILALT 720 YIGQLKSLDNIDSNLFSILLTNILYVSEAGTVHFRILKGIILALT Sbjct: 181 IISIVINSLLSLILKYIGQLKSLDNIDSNLFSILLTNILYVSEAGTVHFRILKGIILALT 240 Query: 721 TIISINYVLKKVMHFKPFMLSISFAIGLPLFANTFIHLEDGENPLLWLVKYILESTIRQK 900 TIISINYVLKKVMHFKPFMLSISFAIGLPLFANTFIHLEDGENPLLWLVKYILESTIRQK Sbjct: 241 TIISINYVLKKVMHFKPFMLSISFAIGLPLFANTFIHLEDGENPLLWLVKYILESTIRQK 300 Query: 901 ILFAWXXXXXXXXXXXXXEKDSLSLNTSRKLWHFIIFLLIIPSFQMDSNFVKIALSGTIP 1080 ILFAW EKDSLSLNTSRKLWHFIIFLLIIPSFQMDSNFVKIALSGTIP Sbjct: 301 ILFAWSSILILSIPSILIEKDSLSLNTSRKLWHFIIFLLIIPSFQMDSNFVKIALSGTIP 360 Query: 1081 VFLSIEYIRFQNLPPLGSAIELQLRRFADDRDHSGPLIISYLYLLFGISTPLLMNNSPMG 1260 VFLSIEYIRFQNLPPLGSAIELQLRRFADDRDHSGPLIISYLYLLFGISTPLLMNNSPMG Sbjct: 361 VFLSIEYIRFQNLPPLGSAIELQLRRFADDRDHSGPLIISYLYLLFGISTPLLMNNSPMG 420 Query: 1261 LIGLGIGDSLASIIGKRYGRIRWKGTQKTLEGTLAFIVTSFIVCLVLLRFDKAAIFNHXX 1440 LIGLGIGDSLASIIGKRYGRIRWKGTQKTLEGTLAFIVTSFIVCLVLLRFDKAAIFNH Sbjct: 421 LIGLGIGDSLASIIGKRYGRIRWKGTQKTLEGTLAFIVTSFIVCLVLLRFDKAAIFNHLT 480 Query: 1441 XXXXXXXXXXSGVLEGNSVLNDNILIPAFMMICEKLITL 1557 SGVLEGNSVLNDNILIPAFMMICEKLITL Sbjct: 481 TLQLLTLCTLSGVLEGNSVLNDNILIPAFMMICEKLITL 519 >gi|19075483|ref|NP_587983.1| putative dolichol kinase [Schizosaccharomyces pombe] gi|7492550|pir||T41511 probable dolichol kinase - fission yeast (Schizosaccharomyces pombe) gi|4539603|emb|CAB40014.1| putative dolichol kinase [Schizosaccharomyces pombe] Length = 465 Score = 132 bits (332), Expect = 2e-29 Identities = 92/314 (29%), Positives = 155/314 (49%), Gaps = 32/314 (10%) Frame = +1 Query: 691 ILKGIIL-ALTTIISINYVLKKV---MH----FKPFMLSISFAIGLPLFANTFIHLEDGE 846 +L G++L +L T+I +N + K+ +H F ++ A+ + L + +++ + G+ Sbjct: 149 VLSGVLLISLPTLILLNLCILKLAAKLHLSALFTTCLIYFFSALLVFLVSRSWVAGQLGQ 208 Query: 847 NPLLWLVKYILE---STIRQKILFAWXXXXXXXXXXXXXEK-----------DSLSLNTS 984 P +WL I S R KI+ W + LN Sbjct: 209 APEVWLFNQIFSHRNSLTRIKIIIWWIICLGCFIFILLRSNRNNPLGKYFTTEDEVLNFR 268 Query: 985 RKLWHFIIFLLIIPSFQMDSNFVKIALSGTIPVFLSIEYIRFQNLPPLGSAIELQLRRFA 1164 RK +H ++ L +P +D +F+ ++ SG + +FL +E IR L P G I L + Sbjct: 269 RKTYHALVVFLFLPVCCLDPHFLHLSFSGVLFIFLFVEGIRILRLKPFGKMIHEFLWEYT 328 Query: 1165 DDRDHSGPLIISYLYLLFGISTPLLMNNS----------PMGLIGLGIGDSLASIIGKRY 1314 D+RDH GPLIIS++YLL G + P+ ++N+ +G++ LG GDS+ASIIGKR+ Sbjct: 329 DNRDHKGPLIISHIYLLIGCAIPIWLSNALKGPVASVELLVGVLCLGCGDSMASIIGKRF 388 Query: 1315 GRIRWKGTQKTLEGTLAFIVTSFIVCLVLLRFDKAAIFNHXXXXXXXXXXXXSGVLEGNS 1494 G+ R T K++EG AF ++ F+V + F + + +LEG S Sbjct: 389 GKHRISKTNKSIEGVFAFSISVFLVLHLTQAFH---VCPSVTFWKTLFMSLCTAILEGVS 445 Query: 1495 VLNDNILIPAFMMI 1536 NDN+++P +M + Sbjct: 446 TENDNLILPMYMWV 459 >gi|7662482|ref|NP_055723.1| KIAA1094 protein [Homo sapiens] gi|20140913|sp|Q9UPQ8|YA94_HUMAN Hypothetical protein KIAA1094 gi|5689525|dbj|BAA83046.1| KIAA1094 protein [Homo sapiens] gi|23272297|gb|AAH35556.1| KIAA1094 protein [Homo sapiens] Length = 538 Score = 131 bits (330), Expect = 3e-29 Identities = 85/307 (27%), Positives = 141/307 (45%), Gaps = 25/307 (8%) Frame = +1 Query: 691 ILKGIILALTTIISINYVLKKVMHFKPFMLSISFAIGLPLFANTFIHLEDGENPLLWLVK 870 +L GI + + + + F +S + LP ++H NPLLWL++ Sbjct: 235 VLMGIFFSTLFVFMDSGTWASSIFFHLMTCVLSLGVVLP-----WLHRLIRRNPLLWLLQ 289 Query: 871 YILESTIRQKILFAWXXXXXXXXXXXXXEKDSLSLNTS---------RKLWHFIIFLLII 1023 ++ ++ R +L W + S + S RK +H I+ I Sbjct: 290 FLFQTDTRIYLLAYWSLLATLACLVVLYQNAKRSSSESKKHQAPTIARKYFHLIVVATYI 349 Query: 1024 PSFQMDSNFVKIALSGTIPVFLSIEYIRFQNLPPLGSAIELQLRRFADDRDHSGPLIISY 1203 P D + +A + + VF+ +EY+R+ + PLG + L F D+RD SGPLI+++ Sbjct: 350 PGIIFDRPLLYVAATVCLAVFIFLEYVRYFRIKPLGHTLRSFLSLFLDERD-SGPLILTH 408 Query: 1204 LYLLFGISTPLLMNNSPM----------------GLIGLGIGDSLASIIGKRYGRIRWKG 1335 +YLL G+S P+ + P G++ +G+GD++ASI G G IRW G Sbjct: 409 IYLLLGMSLPIWLIPRPCTQKGSLGGARALVPYAGVLAVGVGDTVASIFGSTMGEIRWPG 468 Query: 1336 TQKTLEGTLAFIVTSFIVCLVLLRFDKAAIFNHXXXXXXXXXXXXSGVLEGNSVLNDNIL 1515 T+KT EGT+ I I ++L FD N+ S +LE + DN+L Sbjct: 469 TKKTFEGTMTSIFAQIISVALILIFDSGVDLNYSYAWILGSISTVS-LLEAYTTQIDNLL 527 Query: 1516 IPAFMMI 1536 +P +++I Sbjct: 528 LPLYLLI 534 >gi|27706618|ref|XP_231121.1| similar to Hypothetical protein KIAA1094 [Rattus norvegicus] Length = 536 Score = 131 bits (329), Expect = 3e-29 Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 25/263 (9%) Frame = +1 Query: 823 FIHLEDGENPLLWLVKYILESTIRQKILFAWXXXXXXXXXXXXXEKDSLSLNTS------ 984 ++H NPLLWL++++ + R +L W + S + S Sbjct: 272 WLHWLIRRNPLLWLLQFLFYTETRIYLLAYWSLLATMACLVVLYQNAKRSSSESKKHKAP 331 Query: 985 ---RKLWHFIIFLLIIPSFQMDSNFVKIALSGTIPVFLSIEYIRFQNLPPLGSAIELQLR 1155 RK +HFI+ IP D + +A + + VF+ +EY+R+ + PLG + L Sbjct: 332 TITRKYFHFIVVATYIPGIIFDRPLLYVAATVCLAVFIFLEYVRYFRIKPLGHTLRSLLS 391 Query: 1156 RFADDRDHSGPLIISYLYLLFGISTPLLMNNSPM----------------GLIGLGIGDS 1287 F D+RD SGPLI++++YLL G+S P+ + P G++ +G+GD+ Sbjct: 392 LFLDERD-SGPLILTHIYLLLGMSLPIWLIPRPCAQKGSLGGARALVPYAGVLAVGVGDT 450 Query: 1288 LASIIGKRYGRIRWKGTQKTLEGTLAFIVTSFIVCLVLLRFDKAAIFNHXXXXXXXXXXX 1467 +ASI G G IRW GT+KT EGT+ I I ++L FD N+ Sbjct: 451 VASIFGSTMGEIRWPGTKKTFEGTMTSIFAQIISVALILIFDSGVDLNYSYAWILGSIST 510 Query: 1468 XSGVLEGNSVLNDNILIPAFMMI 1536 S +LE + DN+L+P +++I Sbjct: 511 VS-LLEAYTTQIDNLLLPLYLLI 532 >gi|20823764|ref|XP_130156.1| similar to Hypothetical protein KIAA1094 [Mus musculus] gi|20072513|gb|AAH26973.1| Similar to KIAA1094 protein [Mus musculus] Length = 534 Score = 131 bits (329), Expect = 3e-29 Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 25/263 (9%) Frame = +1 Query: 823 FIHLEDGENPLLWLVKYILESTIRQKILFAWXXXXXXXXXXXXXEKDSLSLNTS------ 984 ++H NPLLWL++++ + R +L W + S + S Sbjct: 270 WLHWLIRRNPLLWLLQFLFYTETRIYLLAYWSLLASVACLVVLYQNAKRSSSESKKHRAP 329 Query: 985 ---RKLWHFIIFLLIIPSFQMDSNFVKIALSGTIPVFLSIEYIRFQNLPPLGSAIELQLR 1155 RK +HFI+ IP D + +A + + VF+ +EY+R+ + PLG + L Sbjct: 330 TITRKYFHFIVVATYIPGIIFDRPLLYVAATVCLAVFIFLEYVRYFRIKPLGHTLRSLLS 389 Query: 1156 RFADDRDHSGPLIISYLYLLFGISTPLLMNNSPM----------------GLIGLGIGDS 1287 F D+RD SGPLI++++YLL G+S P+ + P G++ +G+GD+ Sbjct: 390 LFLDERD-SGPLILTHIYLLLGMSLPIWLIPRPCTQKDSLEGARALVPYAGVLAVGVGDT 448 Query: 1288 LASIIGKRYGRIRWKGTQKTLEGTLAFIVTSFIVCLVLLRFDKAAIFNHXXXXXXXXXXX 1467 +ASI G G IRW GT+KT EGT+ I I ++L FD N+ Sbjct: 449 VASIFGSTMGEIRWPGTKKTFEGTMTSIFAQIISVALILIFDSGVDLNYSYAWILGSIST 508 Query: 1468 XSGVLEGNSVLNDNILIPAFMMI 1536 S +LE + DN+L+P +++I Sbjct: 509 VS-LLEAYTTQIDNLLLPLYLLI 530 >gi|22331608|ref|NP_190090.2| putative protein; protein id: At3g45040.1, supported by cDNA: gi_18389247 [Arabidopsis thaliana] Length = 569 Score = 105 bits (261), Expect = 3e-21 Identities = 74/273 (27%), Positives = 131/273 (47%), Gaps = 17/273 (6%) Frame = +1 Query: 772 FMLSISF--AIGLPLFANTFIHLEDGENPLLWLVKYILESTIRQ-KILFAWXXXXXXXXX 942 F +S+ F + +P + F+H + ++P LW++ ++ +++ + W Sbjct: 299 FFVSLLFFMVVAVPSWMQ-FVH-DFNQHPFLWVLTFVFSEPLKRLSLCIYWILLIVVSVS 356 Query: 943 XXXXEKDSLSLNTS--RKLWHFIIFLLIIPSFQMDSNFVKIALSGTIPVFLSIEYIRFQN 1116 S + RK +H + L+ +P+ + F+ +A + VF+++E IR Sbjct: 357 RFYNISRSSKVERILLRKYYHLMAVLMFLPALVLQPKFLDLAFGAALAVFVALEIIRIWR 416 Query: 1117 LPPLGSAIELQLRRFADDRDHSGPLIISYLYLLFGISTPLLMNN-------SPM-GLIGL 1272 + PLG + + F D RD S LI+S+ LL G + P+ M++ SP G++ L Sbjct: 417 IQPLGEPLHQFMNAFTDHRD-SEHLIVSHFSLLLGCALPIWMSSGFNDRALSPFAGILSL 475 Query: 1273 GIGDSLASIIGKRYGRIRWKGT-QKTLEGTLAFIVTSFIVCLVLLR-FDKAAIFNHXXXX 1446 GIGD++AS++G +YG +RW T +KT+EGT A I + VC VL+ Sbjct: 476 GIGDTMASMVGHKYGVLRWSKTGKKTVEGTAAGITSMMAVCFVLVPILASMGYILSQGWW 535 Query: 1447 XXXXXXXXSGVLEGNSVLNDNILIPA--FMMIC 1539 +G+LE + DN IP + ++C Sbjct: 536 SLLVAVTATGMLEAYTAQLDNAFIPLVFYSLLC 568 >gi|18389248|gb|AAL67067.1| unknown protein [Arabidopsis thaliana] Length = 569 Score = 102 bits (253), Expect = 2e-20 Identities = 73/273 (26%), Positives = 130/273 (47%), Gaps = 17/273 (6%) Frame = +1 Query: 772 FMLSISF--AIGLPLFANTFIHLEDGENPLLWLVKYILESTIRQ-KILFAWXXXXXXXXX 942 F +S+ F + +P + F+H + ++P LW++ ++ +++ + W Sbjct: 299 FFVSLLFFMVVAVPSWMQ-FVH-DFNQHPFLWVLTFVFSEPLKRLSLCIYWILLIVVSVS 356 Query: 943 XXXXEKDSLSLNTS--RKLWHFIIFLLIIPSFQMDSNFVKIALSGTIPVFLSIEYIRFQN 1116 S + RK +H + L+ +P+ + F+ +A + VF+++E IR Sbjct: 357 RFYNISRSSKVERILLRKYYHLMAVLMFLPALVLQPKFLDLAFGAALAVFVALEVIRIWR 416 Query: 1117 LPPLGSAIELQLRRFADDRDHSGPLIISYLYLLFGISTPLLMNN-------SPM-GLIGL 1272 + LG + + F D RD S LI+S+ LL G + P+ M++ SP G++ L Sbjct: 417 IQTLGEPLHQFMNAFTDHRD-SEHLIVSHFSLLLGCALPIWMSSGFNDRALSPFAGILSL 475 Query: 1273 GIGDSLASIIGKRYGRIRWKGT-QKTLEGTLAFIVTSFIVCLVLLR-FDKAAIFNHXXXX 1446 GIGD++AS++G +YG +RW T +KT+EGT A I + VC VL+ Sbjct: 476 GIGDTMASMVGHKYGVLRWSKTGKKTVEGTAAGITSMMAVCFVLVPILASMGYILSQGWW 535 Query: 1447 XXXXXXXXSGVLEGNSVLNDNILIPA--FMMIC 1539 +G+LE + DN IP + ++C Sbjct: 536 SLLVAVTATGMLEAYTAQLDNAFIPLVFYSLLC 568 >gi|16944701|emb|CAC28826.2| conserved hypothetical protein [Neurospora crassa] Length = 1091 Score = 97.4 bits (241), Expect = 5e-19 Identities = 49/161 (30%), Positives = 93/161 (57%), Gaps = 23/161 (14%) Frame = +1 Query: 973 LNTSRKLWHFIIFLLIIPSFQMDSNFVKIALSGTIPVFLSIEYIRFQNLPPLGSAIELQL 1152 ++T RK++HF++ + +P+ +D ++ +ALS + +FL ++ +R LPPL + I L Sbjct: 853 VDTRRKVFHFMMVAMFLPTIFIDPTYIALALSIVLAIFLLVDLLRASQLPPLSTPIAQFL 912 Query: 1153 RRFADDRDHSGPLIISYLYLLFGISTPLLMNNSPM----------------------GLI 1266 + D RD GP++IS+++LL G + PL ++ + + G++ Sbjct: 913 TPYVDGRDLRGPVVISHIFLLIGCAIPLWLSLAALPRIGEGPLAGWEVPLRDISMVAGVV 972 Query: 1267 GLGIGDSLASIIGKRYGRIRWK-GTQKTLEGTLAFIVTSFI 1386 +G+GD+ AS+IG+R+G +W G K++EG++AF F+ Sbjct: 973 CVGLGDAAASLIGRRWGHRKWLWGGGKSIEGSIAFATAVFV 1013 >gi|28922656|gb|EAA31881.1| hypothetical protein ( (AL513466) conserved hypothetical protein [Neurospora crassa] ) Length = 1080 Score = 97.4 bits (241), Expect = 5e-19 Identities = 49/161 (30%), Positives = 93/161 (57%), Gaps = 23/161 (14%) Frame = +1 Query: 973 LNTSRKLWHFIIFLLIIPSFQMDSNFVKIALSGTIPVFLSIEYIRFQNLPPLGSAIELQL 1152 ++T RK++HF++ + +P+ +D ++ +ALS + +FL ++ +R LPPL + I L Sbjct: 823 VDTRRKVFHFMMVAMFLPTIFIDPTYIALALSIVLAIFLLVDLLRASQLPPLSTPIAQFL 882 Query: 1153 RRFADDRDHSGPLIISYLYLLFGISTPLLMNNSPM----------------------GLI 1266 + D RD GP++IS+++LL G + PL ++ + + G++ Sbjct: 883 TPYVDGRDLRGPVVISHIFLLIGCAIPLWLSLAALPRIGEGPLAGWEVPLRDISMVAGVV 942 Query: 1267 GLGIGDSLASIIGKRYGRIRWK-GTQKTLEGTLAFIVTSFI 1386 +G+GD+ AS+IG+R+G +W G K++EG++AF F+ Sbjct: 943 CVGLGDAAASLIGRRWGHRKWLWGGGKSIEGSIAFATAVFV 983 >gi|24654201|ref|NP_611139.1| CG8311-PA [Drosophila melanogaster] gi|7302906|gb|AAF57978.1| CG8311-PA [Drosophila melanogaster] Length = 503 Score = 94.0 bits (232), Expect = 6e-18 Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 12/236 (5%) Frame = +1 Query: 850 PLLWLVKYILESTIRQKILFAWXXXXXXXXXXXXXE-KDSLSLNTS-RKLWHFIIFLLII 1023 PLL LV+++L R IL + + S NT RK++H +I ++ I Sbjct: 260 PLLALVQFLLRDQERLAILVFYMLLVVLTCLTVAWQIGSSAKANTRVRKIFHLLIVMVYI 319 Query: 1024 PSFQMDSNFVKIALSGTIPVFLSIEYIRFQNLPPLGSAIELQLRRFADDRDHSGPLIISY 1203 P + + +A + F+ +E +R +PP + + F D++D +G L ++ Sbjct: 320 PGLIFECALLYLATGVALAAFVVLELLRLLKIPPFADRLAVAFSTFKDEKD-AGELALTP 378 Query: 1204 LYLLFGISTPLLMNNSPM----------GLIGLGIGDSLASIIGKRYGRIRWKGTQKTLE 1353 LL G S P+ M P G++ +G+GD+ AS++G + GR +W + ++LE Sbjct: 379 FCLLIGCSMPIWMTPCPCSGDNTLALLSGILAVGVGDTAASVVGSKLGRNKWGRSSRSLE 438 Query: 1354 GTLAFIVTSFIVCLVLLRFDKAAIFNHXXXXXXXXXXXXSGVLEGNSVLNDNILIP 1521 GT+AF+V S ++ + LL + S ++E + DN+++P Sbjct: 439 GTIAFVV-SILMAVWLLEISGLVAMSQAKWFATIFAALNSALVEAFTDQVDNLVLP 493 >gi|11357412|pir||T48980 hypothetical protein F14D17.110 - Arabidopsis thaliana gi|7671405|emb|CAB89319.1| putative protein [Arabidopsis thaliana] Length = 598 Score = 91.3 bits (225), Expect = 4e-17 Identities = 75/302 (24%), Positives = 132/302 (43%), Gaps = 46/302 (15%) Frame = +1 Query: 772 FMLSISF--AIGLPLFANTFIHLEDGENPLLWLVKYILESTIRQ-KILFAWXXXXXXXXX 942 F +S+ F + +P + F+H + ++P LW++ ++ +++ + W Sbjct: 299 FFVSLLFFMVVAVPSWMQ-FVH-DFNQHPFLWVLTFVFSEPLKRLSLCIYWILLIVVSVS 356 Query: 943 XXXXEKDSLSLNTS--RKLWHFIIFLLIIPSFQMDSNFVKIALSGTIPVFLSIEYIRFQN 1116 S + RK +H + L+ +P+ + F+ +A + VF+++E IR + Sbjct: 357 RFYNISRSSKVERILLRKYYHLMAVLMFLPALVLQPKFLDLAFGAALAVFVALEIIRVSS 416 Query: 1117 L-----------------------------PPLGSAIELQLRRFADDRDHSGPLIISYLY 1209 L PLG + + F D RD S LI+S+ Sbjct: 417 LLLKEISFYFSLLSMGLMQDTHCENQIWRIQPLGEPLHQFMNAFTDHRD-SEHLIVSHFS 475 Query: 1210 LLFGISTPLLMNN-------SPM-GLIGLGIGDSLASIIGKRYGRIRWKGT-QKTLEGTL 1362 LL G + P+ M++ SP G++ LGIGD++AS++G +YG +RW T +KT+EGT Sbjct: 476 LLLGCALPIWMSSGFNDRALSPFAGILSLGIGDTMASMVGHKYGVLRWSKTGKKTVEGTA 535 Query: 1363 AFIVTSFIVCLVLLR-FDKAAIFNHXXXXXXXXXXXXSGVLEGNSVLNDNILIPA--FMM 1533 A I + VC VL+ +G+LE + DN IP + + Sbjct: 536 AGITSMMAVCFVLVPILASMGYILSQGWWSLLVAVTATGMLEAYTAQLDNAFIPLVFYSL 595 Query: 1534 IC 1539 +C Sbjct: 596 LC 597 >gi|21295576|gb|EAA07721.1| agCP1878 [Anopheles gambiae str. PEST] Length = 472 Score = 72.8 bits (177), Expect = 1e-11 Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 16/147 (10%) Frame = +1 Query: 982 SRKLWHFIIFLLIIPSFQMDSNFVKIALSGTIPVFLSIEYIRFQNLPPLGSAIELQLRRF 1161 +RK++H +I L+ P + +A + V + +E R L P+ S + ++ F Sbjct: 268 TRKVFHLLIVLVYGPGLWYQCRLLYLASGLMLAVLIVLEMARLIQLAPVASVLNTAVQLF 327 Query: 1162 ADDRDHSGPLIISYLYLLFGISTPLLMNNSPM---------------GLIGLGIGDSLAS 1296 D++D +G + ++ +YLL G S PL ++ +P G++ +GIGD+ AS Sbjct: 328 IDEKD-AGAIALTPIYLLVGCSLPLWLHPAPCDLTNSGGLQMLTLSAGVLSIGIGDTAAS 386 Query: 1297 IIGKRYGRIRWKG-TQKTLEGTLAFIV 1374 + G +GR +W T K++EGT+A ++ Sbjct: 387 VAGYHFGRHKWHDRTNKSVEGTVASVL 413 >gi|23613456|ref|NP_703300.1| hypothetical integral membrane protein, DUF56 family [Plasmodium falciparum 3D7] gi|23510672|emb|CAD49057.1| hypothetical integral membrane protein, DUF56 family [Plasmodium falciparum 3D7] Length = 783 Score = 55.8 bits (133), Expect = 2e-06 Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 30/218 (13%) Frame = +1 Query: 835 EDGENPLLWLVKYILESTIRQKILFAWXXXXXXXXXXXXXE-KDSLSLNTSRKLWHFIIF 1011 +D N L L+ IL S ++FAW K L RK +HF++F Sbjct: 334 KDAINTLYVLIN-ILISKKNYLLIFAWIIITISYLIYINSLIKKKKKLPYVRKHYHFLLF 392 Query: 1012 LLIIPSFQMDS-NFVKIALSGTIPVFLSIEYIR--FQNLPPLGSAIELQLRRFADDRDHS 1182 + +F + + + I LS +F+ +E IR ++ P I+ + RF D+RD+ Sbjct: 393 TNVYLAFITNKVDVLIIFLSFCFFLFIFVELIRKICEHFLPSCKVIKRFISRFIDERDNK 452 Query: 1183 GPLIISYLYLLFGISTPLLM----NNS---------------------PMGLIGLGIGDS 1287 G L+++++YLL G+ P+L+ N S L + IGDS Sbjct: 453 G-LVVTHIYLLTGVYIPILIDIIFNKSNYINRKNQSIYNFSKANFTLYTSALNTICIGDS 511 Query: 1288 LASIIGKRYGRIRWKGT-QKTLEGTLAFIVTSFIVCLV 1398 +A+I G Y + K T K+ G+L F +++FI LV Sbjct: 512 MAAIGGMLYPWPKIKNTNNKSCAGSLFFFISTFISLLV 549 >gi|15606682|ref|NP_214062.1| putative protein [Aquifex aeolicus] gi|7517450|pir||G70433 hypothetical protein aq_1542 - Aquifex aeolicus gi|2983919|gb|AAC07469.1| putative protein [Aquifex aeolicus VF5] Length = 190 Score = 55.8 bits (133), Expect = 2e-06 Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 6/159 (3%) Frame = +1 Query: 973 LNTSRKLWHFIIFLLIIPSFQMDSNFVKIALSGTIPVFLS---IEYIRFQNLPPLGSAIE 1143 L RKL+HF+ LL+I + ++ + L FLS + + + P + E Sbjct: 9 LELRRKLFHFLSILLLIIPVKFFPFWLNVFL------FLSAILLNLLIIFRVSPFYNIFE 62 Query: 1144 LQLRRFADDRDHSGPLIISYLYLLFGISTPLLM--NNSPMGLIGLGIGDSLASIIGKRYG 1317 + ++ F +++ P I S L+ + G+ L+ N+ +G++ L +GD + ++G +G Sbjct: 63 VFIKLFEREKNLETPGIQS-LWAILGVFISYLLFGENAVVGIVVLALGDGFSGLVGYYFG 121 Query: 1318 RIR-WKGTQKTLEGTLAFIVTSFIVCLVLLRFDKAAIFN 1431 R + + +K+LEGTLAF SF+ L+ F +A + + Sbjct: 122 RRKLFYNPKKSLEGTLAFFTASFLGLLLFTDFCEAFVIS 160 >gi|21912578|emb|CAD21544.1| putative dolichol kinase [Taenia solium] Length = 171 Score = 50.4 bits (119), Expect = 8e-05 Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 14/123 (11%) Frame = +1 Query: 1084 FLSIEYIRFQNLPPLGSAIELQLRRFADDRDHSGPLIISYLYLLFGISTPL--------- 1236 F IE+ R P + L F D RD SG LI + + LL G+S P+ Sbjct: 9 FFLIEWTRRSGPPATSKFLNDVLGPFRDARD-SGELIFTPIALLLGLSLPVWNFCYSWSQ 67 Query: 1237 ---LMNNSPMGLIGLGIGDSLASIIGKRYGRI--RWKGTQKTLEGTLAFIVTSFIVCLVL 1401 + + G+I + +GDS+A+++ +R+G + W GT +TL G+ A ++ ++ + L Sbjct: 68 DGTVPPQAWSGVITIALGDSVAALVVRRWGHLWFHWPGTHRTLIGSGASFISQILLWIGL 127 Query: 1402 LRF 1410 F Sbjct: 128 AAF 130 >gi|16332229|ref|NP_442957.1| unknown protein [Synechocystis sp. PCC 6803] gi|7469774|pir||S76857 hypothetical protein - Synechocystis sp. (strain PCC 6803) gi|1653859|dbj|BAA18769.1| ORF_ID:slr1652~unknown protein [Synechocystis sp. PCC 6803] Length = 233 Score = 48.1 bits (113), Expect = 4e-04 Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 11/82 (13%) Frame = +1 Query: 1198 SYLYLLFGISTPLLMNN---------SPMGLIGLGIGDSLASIIGKRYGRIRWK--GTQK 1344 SY L + +S LL+ + +G++ + GD LA+++G+R+GR R++ G +K Sbjct: 100 SYGTLFYALSIGLLVGGFFSLGLPIFAAIGILVMAWGDGLAALVGQRWGRHRYQVFGFRK 159 Query: 1345 TLEGTLAFIVTSFIVCLVLLRF 1410 + EGTL ++ SF+V +V L + Sbjct: 160 SWEGTLTMVLASFLVTVVFLSY 181 >gi|28850457|gb|AAO53220.1| similar to Oryza sativa (japonica cultivar-group). P0446G04.23 protein [Dictyostelium discoideum] Length = 1144 Score = 47.0 bits (110), Expect = 8e-04 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 19/153 (12%) Frame = +1 Query: 1003 IIFLLIIPSFQMDSNFVKIALSGTIPVFLSIEYIRF-----------QNLPPLGSAIELQ 1149 II++L+ F + + KI + G +P+ +S +Y +++ GS EL Sbjct: 957 IIYVLVWRIFPQFNWYSKIVV-GLVPLIISFQYALIGLGIINDQKTVESMSRSGSPRELL 1015 Query: 1150 LRRFADDRDHSGPL----IISYLYLLFGISTPLLMNNSPMGLIGLGI---GDSLASIIGK 1308 L GPL IIS L ++F S P+ +I +G+ GD A+I G Sbjct: 1016 L----------GPLSYGIIISLLTMIFWFS--------PISIITIGVLCLGDGFAAIFGL 1057 Query: 1309 RYGRIRWK-GTQKTLEGTLAFIVTSFIVCLVLL 1404 +YG R +KTL G+LAF + SFI +LL Sbjct: 1058 KYGTKRIPYNREKTLIGSLAFFICSFIGTFILL 1090 >gi|17229102|ref|NP_485650.1| hypothetical protein [Nostoc sp. PCC 7120] gi|25531393|pir||AD2007 hypothetical protein all1610 [imported] - Nostoc sp. (strain PCC 7120) gi|17135430|dbj|BAB77976.1| ORF_ID:all1610~hypothetical protein [Nostoc sp. PCC 7120] Length = 179 Score = 45.4 bits (106), Expect = 0.002 Identities = 19/52 (36%), Positives = 38/52 (73%), Gaps = 2/52 (3%) Frame = +1 Query: 1255 MGLIGLGIGDSLASIIGKRYGRIRWK--GTQKTLEGTLAFIVTSFIVCLVLL 1404 +G++ + GD LA+++G+R+G+ ++K G QK+ EG+L + S++VC ++L Sbjct: 73 IGMMVMAWGDGLAALVGQRFGKHKYKLLGAQKSWEGSLTMALASYLVCSLIL 124 >gi|14521419|ref|NP_126895.1| hypothetical protein [Pyrococcus abyssi] gi|7518165|pir||H75102 hypothetical protein PAB1577 - Pyrococcus abyssi (strain Orsay) gi|5458637|emb|CAB50125.1| Integral membrane protein, putative [Pyrococcus abyssi] Length = 203 Score = 44.7 bits (104), Expect = 0.004 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 15/169 (8%) Frame = +1 Query: 964 SLSLNTSRKLWHF------IIFLLI--IPSFQMDSNFVKIALSGTIPVFLSIEYIRFQNL 1119 SL L RK H II+LL + S F+ I L+ + F +E +R + Sbjct: 2 SLKLELKRKALHMTGLSVPIIYLLFGREATLIFVSTFLVIFLA--LEPFRLVEELRDKVK 59 Query: 1120 PPLG------SAIELQLRRFADDRDHSGPLIISYLYLLFGISTPLLMNNSPMGLIGLG-I 1278 LG + IE ++ A + + G Y L I +G I L I Sbjct: 60 RKLGIPDGVMAKIEREIDGIAREHEKRGLGAHIYFTLAALIIVYFFPKEVTIGSISLATI 119 Query: 1279 GDSLASIIGKRYGRIRWKGTQKTLEGTLAFIVTSFIVCLVLLRFDKAAI 1425 GD++A+I+GK YGR R++ K++EG+LA+++T ++ L+ A I Sbjct: 120 GDAMAAIVGKTYGRHRFE-NGKSVEGSLAYLITGLLILTPLVGLKMAFI 167 >gi|14590788|ref|NP_142858.1| hypothetical protein [Pyrococcus horikoshii] gi|7518902|pir||C71084 hypothetical protein PH0936 - Pyrococcus horikoshii gi|3257350|dbj|BAA30033.1| 202aa long hypothetical protein [Pyrococcus horikoshii] Length = 202 Score = 44.3 bits (103), Expect = 0.005 Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 17/171 (9%) Frame = +1 Query: 964 SLSLNTSRKLWHF------IIFLLIIPSFQMDSNFVKIALSGTIPVFLSIEYIRFQNLPP 1125 SL L RK H +I+L + S + + + + + F E +R + Sbjct: 2 SLKLELKRKALHMTGLSVPLIYLALGKSAAITFVLIFLIIFLALEPFRLGEGLRIKVKEK 61 Query: 1126 LG------SAIELQLRRFADDRDHSGPLIISYLYLLFGISTPLLMNNSP----MGLIGLG 1275 LG IE ++ A +R+ G I +++Y F I+ L++ P +G I + Sbjct: 62 LGIPEEVTEKIEREIDGIAREREKRG--IGAHIY--FTIAALLVIYLFPREVAIGSISVA 117 Query: 1276 -IGDSLASIIGKRYGRIRWKGTQKTLEGTLAFIVTSFIVCLVLLRFDKAAI 1425 +GD++A+IIGK YGR R+K K++EG+LA+ +T ++ L+ A + Sbjct: 118 TLGDAMAAIIGKSYGRHRFK-NGKSVEGSLAYFITGLLILTPLVGLKMALL 167 >gi|23022090|ref|ZP_00061721.1| hypothetical protein [Clostridium thermocellum ATCC 27405] Length = 255 Score = 43.9 bits (102), Expect = 0.007 Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 5/57 (8%) Frame = +1 Query: 1261 LIGLGIGDSLASIIGKRYGRIRWKGTQ----KTLEGTLAFIVTSFI-VCLVLLRFDK 1416 ++ G+GD+ A+++GKR+GR +G K+LEGT A V SFI V +VL+ DK Sbjct: 149 VLAWGLGDAAAALVGKRFGRHFVRGRLVEGCKSLEGTFAMFVVSFISVMIVLIAHDK 205 >gi|19074144|ref|NP_584750.1| similarity with dolichol kinase SC59_yeast [Encephalitozoon cuniculi] gi|19068786|emb|CAD25254.1| similarity with dolichol kinase SC59_yeast [Encephalitozoon cuniculi] Length = 317 Score = 43.9 bits (102), Expect = 0.007 Identities = 50/192 (26%), Positives = 79/192 (41%), Gaps = 5/192 (2%) Frame = +1 Query: 976 NTSRKLWHFIIFLLIIPSFQMDSNFVKIALSGTIPVFLSI-EYIRFQNLPPLGSAIELQL 1152 N RK +H FL+ + V L+ + +F+S+ R+ N L Sbjct: 143 NLKRKTFHLFAFLVFYKEHR-----VSFLLAEGLLLFMSLLSSCRYTN----------SL 187 Query: 1153 RRFADDRDHSGPLIISYLYLLFGISTPLLMNNSP---MGLIGLGIGDSLASIIGKRYGRI 1323 R R+ G ++S +YLL P L LI + DS ASI GK +G Sbjct: 188 LRPFFSRNDKGRTLLSPIYLLSACMYPRLFIEDVEYVSALISICFQDSAASIAGKWFGV- 246 Query: 1324 RWKGTQKTLEGTLAFIVTSFIVCLVLL-RFDKAAIFNHXXXXXXXXXXXXSGVLEGNSVL 1500 T+K+++G +A +++ +V L R D F +G +E + Sbjct: 247 ----TEKSIQGAIAGVISGTVVYFALYGRIDMLPFF------------IFAGSVEYLVPI 290 Query: 1501 NDNILIPAFMMI 1536 NDNI IP F ++ Sbjct: 291 NDNITIPLFAVL 302 >gi|23128088|gb|ZP_00109944.1| hypothetical protein [Nostoc punctiforme] Length = 209 Score = 42.7 bits (99), Expect = 0.016 Identities = 19/52 (36%), Positives = 37/52 (71%), Gaps = 2/52 (3%) Frame = +1 Query: 1255 MGLIGLGIGDSLASIIGKRYGRIRWK--GTQKTLEGTLAFIVTSFIVCLVLL 1404 +G++ + GD LA++IG+R+G ++K GTQK+ EG+L + S+ + +++L Sbjct: 104 LGILIMTWGDGLAALIGQRFGTHKYKVFGTQKSWEGSLTMMFVSYFISILIL 155 >gi|24214587|ref|NP_712068.1| conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] gi|24195556|gb|AAN49086.1|AE011362_9 conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] Length = 252 Score = 41.6 bits (96), Expect = 0.035 Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 18/167 (10%) Frame = +1 Query: 958 KDSLSLNTSRKLWHFI-----------IFLLIIPSFQMDSNFVKIALSGTIPVFLSIEYI 1104 K+S+ N +RKLWH + +F V +AL + V EY+ Sbjct: 2 KNSIRFNYARKLWHLLGLIFPICYYLDVFQGAFGLLNATRVLVTVALVFCLGVVSLFEYL 61 Query: 1105 RFQ-------NLPPLGSAIELQLRRFADDRDHSGPLIISYLYLLFGISTPLLMNNSPMGL 1263 RF+ L LG ++ + + + + + P S +++F + S + + Sbjct: 62 RFRFSGFQKFFLSTLGILMKEEEK---NRLNGTLPYFFSCAFVVFLFPPEI----SILSM 114 Query: 1264 IGLGIGDSLASIIGKRYGRIRWKGTQKTLEGTLAFIVTSFIVCLVLL 1404 + L IGD A+ +G YG+ R+ K++EG +AFIV IV V L Sbjct: 115 LFLVIGDPTAAWVGTFYGKRRF-SNGKSVEGIIAFIVVCTIVGFVFL 160 >gi|21674801|ref|NP_662866.1| conserved hypothetical protein [Chlorobium tepidum TLS] gi|21648018|gb|AAM73208.1| conserved hypothetical protein [Chlorobium tepidum TLS] Length = 237 Score = 41.2 bits (95), Expect = 0.046 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 1/86 (1%) Frame = +1 Query: 1270 LGIGDSLASIIGKRYGRIRWK-GTQKTLEGTLAFIVTSFIVCLVLLRFDKAAIFNHXXXX 1446 LG GD LA I+G R G++++K ++++EG++AF+ S L + FN Sbjct: 145 LGWGDGLAPIVGTRMGKMKYKVFCERSVEGSIAFLAGSLAAGLFFVWLIVPQAFNPAKIA 204 Query: 1447 XXXXXXXXSGVLEGNSVLNDNILIPA 1524 L V DNILIPA Sbjct: 205 MIAVAATVIEALSPKEV--DNILIPA 228 >gi|20090858|ref|NP_616933.1| integral membrane protein [Methanosarcina acetivorans str. C2A] gi|19915930|gb|AAM05413.1| integral membrane protein [Methanosarcina acetivorans str. C2A] Length = 225 Score = 40.8 bits (94), Expect = 0.060 Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 13/204 (6%) Frame = +1 Query: 955 EKDSLSLNTSRKLWHF---IIFLLIIPSFQMDSNFVKIALSGTIPVFLSIEYIRFQNLPP 1125 E SL R+L H I F+L+I + ++ + L + +L+ ++ +N+ P Sbjct: 16 ENSSLKGEVERQLIHLLTGIFFILLIYVAGERALWILLLL---LAFYLATSFVISKNILP 72 Query: 1126 LGSAIELQLRRFADDRDHSGPLIISYLYLLFGISTPLLMNNSPM---GLIGLGIGDSLAS 1296 ++ L R+ + PL + L LL GI L++ + + +G GDS+++ Sbjct: 73 --PSLSPFLCRWGRPEKQNIPLKGNIL-LLCGIILSLVLFPEEIVYASIAIVGFGDSVST 129 Query: 1297 IIGKRYGRIRWK-GTQKTLEGTLAFIVTSFIVCLVLLRFDKAAIFNHXXXXXXXXXXXXS 1473 + G GR + +KT+EGTLA I+ +F+ L + +A + Sbjct: 130 VTGVTIGRHKLPYSEEKTVEGTLAGILVAFLASLFFVTSAQAFV-GSIGGMLLESVVDLQ 188 Query: 1474 GVLEGNS------VLNDNILIPAF 1527 V E NS LNDN LIP F Sbjct: 189 TVKELNSRAAFRFFLNDNFLIPIF 212 >gi|21226333|ref|NP_632255.1| hypothetical protein [Methanosarcina mazei Goe1] gi|20904582|gb|AAM29927.1| hypothetical protein [Methanosarcina mazei Goe1] Length = 223 Score = 40.4 bits (93), Expect = 0.078 Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 10/201 (4%) Frame = +1 Query: 955 EKDSLSLNTSRKLWHFIIFLLIIPSFQMDSNFVKIALSGTIPVFLSIEYIRFQNLPPLGS 1134 EK SL R+L H + I + + L + +L++ Y+ + P S Sbjct: 16 EKASLKGELERQLIHLFTGIFFIIFVYLTGDHALTLLLLLLVFYLAVIYVILNEMLP--S 73 Query: 1135 AIELQLRRFADDRDHSGPLIISYLYLLFGISTPLLMNNSPM---GLIGLGIGDSLASIIG 1305 + L R+ + PL + L L+ GI L++ + + +G GDS+A+I G Sbjct: 74 PLYAFLCRWGRPGKQNIPLKGTIL-LVCGIVVSLILFPEEIVYASIAVVGFGDSVATIAG 132 Query: 1306 KRYGRIRWKGTQ-KTLEGTLAFIVTSFIVCLVLLRFDKAAIFNHXXXXXXXXXXXXSGVL 1482 GR + ++ K++EGTLA I+ +F + + +A + + Sbjct: 133 VTLGRHKLPYSENKSIEGTLAGILAAFFTSMFFVTPVQAFV-GSAGGMLLESVVDLQTIK 191 Query: 1483 EGNS------VLNDNILIPAF 1527 E NS LNDN LIP F Sbjct: 192 ELNSQAAYKFFLNDNFLIPVF 212 >gi|11498907|ref|NP_070138.1| conserved hypothetical protein [Archaeoglobus fulgidus] gi|7483114|pir||D69413 conserved hypothetical protein AF1309 - Archaeoglobus fulgidus gi|2649270|gb|AAB89938.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 211 Score = 39.3 bits (90), Expect = 0.17 Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 5/50 (10%) Frame = +1 Query: 1255 MGLIGLGIGDSLASIIGKRYGRIRWK--GTQKTLEGTLAFI---VTSFIV 1389 +G++ + GD LAS+IG RYG+ +++ G +K+LEG++A V SF V Sbjct: 114 VGIMAMSYGDGLASLIGGRYGKRKFRILGDEKSLEGSVAMFLGCVASFSV 163 >gi|15669324|ref|NP_248129.1| conserved hypothetical protein [Methanococcus jannaschii] gi|2128687|pir||H64441 hypothetical protein MJ1137 - Methanococcus jannaschii gi|1591771|gb|AAB99139.1| conserved hypothetical protein [Methanococcus jannaschii] Length = 191 Score = 38.5 bits (88), Expect = 0.30 Identities = 19/44 (43%), Positives = 32/44 (72%) Frame = +1 Query: 1258 GLIGLGIGDSLASIIGKRYGRIRWKGTQKTLEGTLAFIVTSFIV 1389 G++ +GDSLA+IIG R G+++ K KT+EG LAF +++ ++ Sbjct: 94 GILVFAVGDSLATIIGIR-GKLKIKYFGKTVEGFLAFFISASLI 136 >gi|15679110|ref|NP_276227.1| conserved protein [Methanothermobacter thermautotrophicus] gi|7482080|pir||A69013 conserved hypothetical protein MTH1099 - Methanobacterium thermoautotrophicum (strain Delta H) gi|2622200|gb|AAB85588.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 246 Score = 38.5 bits (88), Expect = 0.30 Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 11/154 (7%) Frame = +1 Query: 976 NTSRKLWHFII--FLLIIPSFQMDSNFVKIALSGTIPVFLSIEYIRFQNLPPLGSAIELQ 1149 N SRK H ++ L I+P F+ + + I P F+ I ++ P L+ Sbjct: 59 NLSRKFVHIMVGNILFILPLFE---SRLVITFLAAAP-FILITFLLSPYSP-------LR 107 Query: 1150 LRRFADDRDHSGPLI---ISYLYLLFGISTPLLMNNSP----MGLIGLGIGDSLASIIGK 1308 ++ A H L+ IS+ L + L +P +G+ + GD AS+ G+ Sbjct: 108 VKHRASSYGHGLGLVYYSISWTILAY------LFFEAPWITGIGIAAMSYGDGFASLTGE 161 Query: 1309 RYGRIRWK--GTQKTLEGTLAFIVTSFIVCLVLL 1404 R+GR + G +K+LEG+L FI+ LV+L Sbjct: 162 RFGRTTFSVLGDKKSLEGSLGM----FIILLVML 191 >gi|18977532|ref|NP_578889.1| hypothetical protein [Pyrococcus furiosus DSM 3638] gi|18893241|gb|AAL81284.1| hypothetical protein [Pyrococcus furiosus DSM 3638] Length = 202 Score = 38.1 bits (87), Expect = 0.39 Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 9/135 (6%) Frame = +1 Query: 1048 FVKIALSGTIPV--FLSIEYIRFQNLPPLG------SAIELQLRRFADDRDHSGPLIISY 1203 FV +AL+ + + F ++E +R + LG + IE ++ A + + G Y Sbjct: 34 FVSLALTVFLILEPFRTVEELRERIKKKLGIPEEIANKIEKEIESIAREHEKRGIGAHIY 93 Query: 1204 LYLLFGISTPLLMNNSPMGLIGLG-IGDSLASIIGKRYGRIRWKGTQKTLEGTLAFIVTS 1380 I L +G I + +GD++A+I+GK +G R+K K++EG+L+ + Sbjct: 94 FAAASLIIVLLFPREVAIGSIAVATLGDAVAAIVGKSFGNHRFK-NGKSIEGSLSHFIVG 152 Query: 1381 FIVCLVLLRFDKAAI 1425 ++ L+ F A I Sbjct: 153 LLILFPLVGFKIAII 167 >gi|21674531|ref|NP_662596.1| membrane protein [Chlorobium tepidum TLS] gi|21647725|gb|AAM72938.1| membrane protein [Chlorobium tepidum TLS] Length = 226 Score = 38.1 bits (87), Expect = 0.39 Identities = 18/42 (42%), Positives = 31/42 (73%) Frame = +1 Query: 1270 LGIGDSLASIIGKRYGRIRWKGTQKTLEGTLAFIVTSFIVCL 1395 + + D++A+++GKR+GR R+ QK+ EG+LAF V++ V L Sbjct: 124 VSVSDTVAALVGKRFGRHRF--GQKSFEGSLAFFVSALPVVL 163 >gi|22299582|ref|NP_682829.1| ORF_ID:tll2039~hypothetical protein [Thermosynechococcus elongatus BP-1] gi|22295766|dbj|BAC09591.1| ORF_ID:tll2039~hypothetical protein [Thermosynechococcus elongatus BP-1] Length = 214 Score = 38.1 bits (87), Expect = 0.39 Identities = 24/70 (34%), Positives = 37/70 (52%) Frame = +1 Query: 1195 ISYLYLLFGISTPLLMNNSPMGLIGLGIGDSLASIIGKRYGRIRWKGTQKTLEGTLAFIV 1374 I L LF + P L + +G++ + GD LA+++G +GR GT K+ EGTL Sbjct: 98 IGILMALFWKTLPEL---AVLGILVMAWGDGLAALVGIHWGRHPLPGTSKSWEGTLTMFW 154 Query: 1375 TSFIVCLVLL 1404 S +V + L Sbjct: 155 VSTLVAALSL 164 >gi|23039986|gb|ZP_00071525.1| hypothetical protein [Trichodesmium erythraeum IMS101] Length = 244 Score = 37.4 bits (85), Expect = 0.66 Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 2/52 (3%) Frame = +1 Query: 1255 MGLIGLGIGDSLASIIGKRYGRIRWK--GTQKTLEGTLAFIVTSFIVCLVLL 1404 +G++ + GD A+IIG+ +G+ ++ G K+ EG+L + S+ VC ++L Sbjct: 141 IGILTMAWGDGFAAIIGQNFGKHPYQVWGMNKSWEGSLGMCLVSYTVCSLIL 192 >gi|22971499|gb|ZP_00018451.1| hypothetical protein [Chloroflexus aurantiacus] Length = 236 Score = 37.0 bits (84), Expect = 0.86 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 10/84 (11%) Frame = +1 Query: 1189 LIISYLYLLFGISTPLLMNNSP--------MGLIGLGIGDSLASIIGKRYGRIRWKGTQ- 1341 L I+ L+L+F NSP G + + GD+LA+I+GKR+GR ++ Q Sbjct: 99 LSITILFLIFW------RTNSPDDRGYIAAAGTMAMTWGDALAAIVGKRWGRHYYQIGQG 152 Query: 1342 -KTLEGTLAFIVTSFIVCLVLLRF 1410 ++ EG+ A + S + L+ L F Sbjct: 153 RRSFEGSAAMFIASTVAILLTLLF 176 >gi|27467427|ref|NP_764064.1| di-tripepride ABC transporter [Staphylococcus epidermidis ATCC 12228] gi|27314970|gb|AAO04106.1|AE016745_205 di-tripepride ABC transporter [Staphylococcus epidermidis ATCC 12228] Length = 501 Score = 36.6 bits (83), Expect = 1.1 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 3/145 (2%) Frame = +1 Query: 1006 IFLLIIPSFQMDSNFVKIA--LSGTIPVFLSIEYIRFQNLPPLGSAIE-LQLRRFADDRD 1176 +F +I+ S M N I L V + ++ F +G+ + + L+ + D R+ Sbjct: 126 MFFIIVGSGLMKPNISNIVGRLYPENDVRMDAGFVIFYMSVNMGALVSPIILQHYIDIRN 185 Query: 1177 HSGPLIISYLYLLFGISTPLLMNNSPMGLIGLGIGDSLASIIGKRYGRIRWKGTQKTLEG 1356 G +I+ + + G+ LL N +G IG+ + L+S K+YG I Sbjct: 186 FHGGFLIAAIGMALGLVWYLLFNRKTLGSIGMKPTNPLSSSEKKKYGTI----------- 234 Query: 1357 TLAFIVTSFIVCLVLLRFDKAAIFN 1431 + +V + ++ L++ F FN Sbjct: 235 -IGIVVIAIVLILMIAYFTHTLSFN 258 >gi|15679372|ref|NP_276489.1| conserved protein [Methanothermobacter thermautotrophicus] gi|7482123|pir||F69049 conserved hypothetical protein MTH1373 - Methanobacterium thermoautotrophicum (strain Delta H) gi|2622482|gb|AAB85850.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 183 Score = 36.6 bits (83), Expect = 1.1 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 2/107 (1%) Frame = +1 Query: 1207 YLLFGISTPLLMNNSPMGLIGLGIGDSLASIIGKRYGR--IRWKGTQKTLEGTLAFIVTS 1380 Y LFG + M + +I L +GDSL++IIG+R+G+ I K K++EG+ AF+ Sbjct: 84 YSLFGFN----MAVANAAIIILTLGDSLSTIIGRRFGKHPIPLK-HDKSIEGSAAFLAAG 138 Query: 1381 FIVCLVLLRFDKAAIFNHXXXXXXXXXXXXSGVLEGNSVLNDNILIP 1521 F+ L + ++E + + DNI+IP Sbjct: 139 FLGSLFFVE-----------PIHALTGAITGMLVEAYTPVEDNIVIP 174 >gi|16660391|gb|AAL27558.1|AF425229_3 vanillate transporter VanK [Pseudomonas putida] Length = 443 Score = 35.8 bits (81), Expect = 1.9 Identities = 30/73 (41%), Positives = 37/73 (50%), Gaps = 9/73 (12%) Frame = +1 Query: 1168 DRDHSGPLIISYLYLLFGISTPL-LMNNSPM------GLIGLGIGDSLAS--IIGKRYGR 1320 DR PLI+ L L GI L M+ SP+ GL GLGIG LAS +I Y Sbjct: 80 DRFGRRPLILLCL-ALSGIGMLLSAMSQSPLQLALLRGLTGLGIGGILASSNVIASEYAS 138 Query: 1321 IRWKGTQKTLEGT 1359 RW+G +L+ T Sbjct: 139 KRWRGLAVSLQST 151 >gi|24379986|ref|NP_721941.1| putative MDR permease; possible transmembrane efflux protein [Streptococcus mutans UA159] gi|24377973|gb|AAN59247.1|AE014992_2 putative MDR permease; possible transmembrane efflux protein [Streptococcus mutans UA159] Length = 561 Score = 35.8 bits (81), Expect = 1.9 Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 12/168 (7%) Frame = +1 Query: 958 KDSLSLNTSRKLWHFIIFLLIIPSFQMDSNFVKIALSGTIPVFLSIEYIRFQNLPPLGSA 1137 +DSL +N + W ++ +I S + I LS F ++ L +G + Sbjct: 32 QDSLKVNLNDLQWSLNVYTIIFAS-------LTIPLSKLAEKFGKHKFYLLGLLTFMGGS 84 Query: 1138 I------ELQLRRFADDRDHSGPLIISYLYLLFGISTPLLMNNSPMGLIGLGIGDSLASI 1299 + +L F G I+ L + GI+T + +N + LG+ LA+ Sbjct: 85 LISALSSDLNFLIFGRGIQSIGAAIVFPLSMTIGINT-VSLNTRKSVIAALGVTQGLAAA 143 Query: 1300 IGKRYGRI--RWKGTQKTLEGTLAFIVTSFIVCLVLL----RFDKAAI 1425 +G G + ++ G + L +V SFI+CLV L R +KA I Sbjct: 144 LGPTIGGVLTQFLGWRWIFLINLPLMVISFIICLVCLDLQERKEKAKI 191 >gi|26006809|sp|Q9ER47|KCH7_MOUSE Potassium voltage-gated channel subfamily H member 7 (Ether-a-go-go related gene potassium channel 3) (Ether-a-go-go related protein 3) (Eag-related protein 3) gi|11121258|emb|CAC14797.1| erg3 protein [Mus musculus] Length = 1195 Score = 35.4 bits (80), Expect = 2.5 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 10/73 (13%) Frame = -1 Query: 291 YQTHHKDIYKDLFIRYISGNNGPRLK-PFNTVKKSA---------QQYNSLNKIRIKALK 142 + H K+I++D R+ S +NG +K PFN +K S +Y+++NKI L Sbjct: 282 FSVHPKNIFRD---RHASEDNGRNVKGPFNHIKSSLLGSTSDSNLNKYSTINKIPQLTLN 338 Query: 141 ISRIPAHIKFTSP 103 S + K TSP Sbjct: 339 FSDVKTEKKNTSP 351 >gi|18777774|ref|NP_571987.1| potassium channel erg3 [Rattus norvegicus] gi|26006788|sp|O54852|KCH7_RAT Potassium voltage-gated channel subfamily H member 7 (Ether-a-go-go related gene potassium channel 3) (Ether-a-go-go related protein 3) (Eag related protein 3) gi|2745727|gb|AAB94741.1| potassium channel [Rattus norvegicus] Length = 1195 Score = 35.4 bits (80), Expect = 2.5 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 10/73 (13%) Frame = -1 Query: 291 YQTHHKDIYKDLFIRYISGNNGPRLK-PFNTVKKSA---------QQYNSLNKIRIKALK 142 + H K+I++D R+ S +NG +K PFN +K S +Y+++NKI L Sbjct: 282 FNVHPKNIFRD---RHASEDNGRNVKGPFNHIKSSLLGSTSDSNLNKYSTINKIPQLTLN 338 Query: 141 ISRIPAHIKFTSP 103 S + K TSP Sbjct: 339 FSDVKTEKKNTSP 351 >gi|23597578|ref|XP_130310.2| potassium channel protein erg3 [Mus musculus] Length = 1195 Score = 35.4 bits (80), Expect = 2.5 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 10/73 (13%) Frame = -1 Query: 291 YQTHHKDIYKDLFIRYISGNNGPRLK-PFNTVKKSA---------QQYNSLNKIRIKALK 142 + H K+I++D R+ S +NG +K PFN +K S +Y+++NKI L Sbjct: 282 FSVHPKNIFRD---RHASEDNGRNVKGPFNHIKSSLLGSTSDSNLNKYSTINKIPQLTLN 338 Query: 141 ISRIPAHIKFTSP 103 S + K TSP Sbjct: 339 FSDVKTEKKNTSP 351 >gi|26329609|dbj|BAC28543.1| unnamed protein product [Mus musculus] Length = 522 Score = 35.4 bits (80), Expect = 2.5 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 10/73 (13%) Frame = -1 Query: 291 YQTHHKDIYKDLFIRYISGNNGPRLK-PFNTVKKSA---------QQYNSLNKIRIKALK 142 + H K+I++D R+ S +NG +K PFN +K S +Y+++NKI L Sbjct: 282 FSVHPKNIFRD---RHASEDNGRNVKGPFNHIKSSLLGSTSDSNLNKYSTINKIPQLTLN 338 Query: 141 ISRIPAHIKFTSP 103 S + K TSP Sbjct: 339 FSDVKTEKKNTSP 351 >gi|23134842|ref|ZP_00116616.1| hypothetical protein [Synechococcus sp. WH 8102] Length = 216 Score = 35.0 bits (79), Expect = 3.3 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Frame = +1 Query: 1258 GLIGLGIGDSLASIIGKRYGRIRWK--GTQKTLEGTLAFIVTSFIVCLVLLRFDKAAI 1425 G++ + +GD LA +IG+ RW G K++ GTL + S +V + L+ AI Sbjct: 118 GVLVMALGDGLAGLIGRSVNSARWTVLGQTKSVAGTLTMALVSTLVLVGLMLVSGNAI 175 >gi|23129304|gb|ZP_00111136.1| hypothetical protein [Nostoc punctiforme] Length = 239 Score = 35.0 bits (79), Expect = 3.3 Identities = 16/51 (31%), Positives = 35/51 (68%), Gaps = 2/51 (3%) Frame = +1 Query: 1258 GLIGLGIGDSLASIIGKRYGRIRWK--GTQKTLEGTLAFIVTSFIVCLVLL 1404 G++ + GD+LA++IG+R+G+ +++ + ++ EG+ A V S +V ++L Sbjct: 123 GIMAMTWGDALAALIGRRFGQHKYQVGNSVRSWEGSAAMFVASTVVIFLVL 173 >gi|11362587|pir||T45229 probable F420H2-dehydrogenase [imported] - Methanolobus tindarius gi|5931751|emb|CAB56642.1| F420H2-dehydrogenase subunit, putative [Methanolobus tindarius] Length = 215 Score = 34.7 bits (78), Expect = 4.3 Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 12/155 (7%) Frame = +1 Query: 976 NTSRKLWHFIIFLLIIPS---FQMDSNFVKIALSGTIPV-FLSIEYIRFQNLPPLGSAIE 1143 ++ RKL H I L IP F S +V L + +S+ ++R P+ I Sbjct: 14 DSERKLVHVISGLAYIPLVYFFTEISLYVLFLLEFVFFITVVSLAFLRKAKYQPVCDMI- 72 Query: 1144 LQLRRFADDRDHSGPLIISYLYLLFGISTPLLMNNS--PMGLIGLGI-----GDSLASII 1302 RR+ +++ PL + L I+T +L++ P+ ++ I GD +A++ Sbjct: 73 ---RRWGRKKENYLPLKATLL-----INTGILISYFLFPVNIVCAAIAITALGDGIATVA 124 Query: 1303 GKRYGRIRWK-GTQKTLEGTLAFIVTSFIVCLVLL 1404 G+R+G+ +KT EGT+A I+ +F ++ + Sbjct: 125 GERFGKHNLPYSERKTYEGTMAGIIAAFASTVIFV 159 >gi|26990446|ref|NP_745871.1| major facilitator family transporter [Pseudomonas putida KT2440] gi|24985417|gb|AAN69335.1|AE016571_1 major facilitator family transporter [Pseudomonas putida KT2440] Length = 446 Score = 34.7 bits (78), Expect = 4.3 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 9/73 (12%) Frame = +1 Query: 1168 DRDHSGPLIISYLYLLFGISTPL-LMNNSPM------GLIGLGIGDSLAS--IIGKRYGR 1320 DR PLI+ L L GI L ++ SP+ GL GLGIG LAS +I Y Sbjct: 80 DRFGRRPLILLCL-ALSGIGMLLSALSQSPLQLALLRGLTGLGIGGILASSNVIASEYAS 138 Query: 1321 IRWKGTQKTLEGT 1359 RW+G +L+ T Sbjct: 139 ERWRGLAVSLQST 151 >gi|23491329|gb|EAA22892.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 740 Score = 33.9 bits (76), Expect = 7.3 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Frame = +3 Query: 885 YYSSKDFVCL----VFNSYTVHTKYIDREGQSIVEHLPKIVAFHHFLTHNTVIPNGFKLC 1052 Y +SK+ + + V+N + H KYI + + KI HF HN C Sbjct: 93 YINSKNIILIIDIYVYNLF-FHFKYISKNINNYYLRFNKIAYPFHFSFHNN------NTC 145 Query: 1053 ENCIVRNNTSL-------LIN*VHKISK 1115 ENC ++ NT+ IN ++KI+K Sbjct: 146 ENCTLKGNTNYGCKQKISKINEINKINK 173 >gi|22405501|gb|ZP_00000381.1| hypothetical protein [Ferroplasma acidarmanus] Length = 314 Score = 33.9 bits (76), Expect = 7.3 Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Frame = +1 Query: 1276 IGDSLASIIG-KRYGRIRWKGTQKTLEGTLAFIVTSFIVCLVLLRFDKAAIFNHXXXXXX 1452 IGDSLA+IIG K R + +K++ G L ++ SF+ L + +A + Sbjct: 228 IGDSLATIIGMKIRSRKLFYNRRKSMAGFLGMLIPSFLFGLFFFVYFISAFYAIGGTFAE 287 Query: 1453 XXXXXXSGVLEGNSVLNDNILIPAFMMICEKLITL 1557 N + +DNI IP ++I +I++ Sbjct: 288 SI---------SNKIADDNITIPVSIVIIHFIISM 313 >gi|26006811|sp|Q9NS40|KCH7_HUMAN Potassium voltage-gated channel subfamily H member 7 (Ether-a-go-go related gene potassium channel 3) (HERG-3) (Ether-a-go-go related protein 3) (Eag related protein 3) gi|4104136|gb|AAD01946.1| potassium channel subunit [Homo sapiens] Length = 1196 Score = 33.9 bits (76), Expect = 7.3 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 10/73 (13%) Frame = -1 Query: 291 YQTHHKDIYKDLFIRYISGNNGPRLK-PFNTVKKSA---------QQYNSLNKIRIKALK 142 + H K+I++D R+ S +NG +K PFN +K S +Y+++NKI L Sbjct: 282 FGVHPKNIFRD---RHASEDNGRNVKGPFNHIKSSLLGSTSDSNLNKYSTINKIPQLTLN 338 Query: 141 ISRIPAHIKFTSP 103 S + K +SP Sbjct: 339 FSEVKTEKKNSSP 351 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 19, 2003 11:08 PM Number of letters in database: 441,946,756 Number of sequences in database: 1,375,764 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,208,780,849 Number of Sequences: 1375764 Number of extensions: 25907205 Number of successful extensions: 61917 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 58269 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 61857 length of database: 441,946,756 effective HSP length: 128 effective length of database: 265,848,964 effective search space used: 103946944924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)