MedBlast Result

MedBlast(0.8) Results
Direct References
Indirect References
Options
BLASTN
BLASTX
Direct References:
Hit	Evalue	SeqType	References
U19102	0.0	N	Gene 1996 Oct 10;175(1-2):233-40 Nature 1997 May 29;387(6632 Suppl):87-90
L37016	0.0	N	Mol Biol Cell 1997 Feb;8(2):367-85
X15953	3e-99	N	Eur J Biochem 1990 Mar 30;188(3):597-603
NP_013457	0.0	P
P41698	0.0	P
S51461	0.0	P
AAB67749	0.0	P
AAA64518	0.0	P
NP_011555	1e-34	P
P53226	1e-34	P
S64332	1e-34	P
CAA97039	1e-34	P
CAA97041	2e-32	P
AAG17454	4e-31	P
References Summary:
Nicolas RH, Goodwin GH
Molecular cloning of polybromo, a nuclear protein containing multiple domains including five bromodomains, a truncated HMG-box, and two repeats of a novel domain.
Gene 1996 Oct 10;175(1-2):233-40
PMID: 8917104
Johnston M, Hillier L, Riles L, Albermann K, Andre B, Ansorge W, Benes V, Bruckner M, Delius H, Dubois E, Dusterhoft A, Entian KD, Floeth M, Goffeau A, Hebling U, Heumann K, Heuss-Neitzel D, Hilbert H, Hilger F, Kleine K, Kotter P, Louis EJ, Messenguy F, Mewes HW, Hoheisel JD, et al
The nucleotide sequence of Saccharomyces cerevisiae chromosome XII.
Nature 1997 May 29;387(6632 Suppl):87-90
PMID: 9169871
Lila T, Drubin DG
Evidence for physical and functional interactions among two Saccharomyces cerevisiae SH3 domain proteins, an adenylyl cyclase-associated protein and the actin cytoskeleton.
Mol Biol Cell 1997 Feb;8(2):367-85
PMID: 9190214
Schaaff I, Hohmann S, Zimmermann FK
Molecular analysis of the structural gene for yeast transaldolase.
Eur J Biochem 1990 Mar 30;188(3):597-603
PMID: 2185015
Indirect References:
Hit	Evalue	SeqType	References
U19102	0.0	N	bud8p J Cell Biol 2002 Mar 4;156(5):829-41 Mol Biol Cell 2002 Sep;13(9):2990-3004 EMBO J 2000 Dec 15;19(24):6686-96 Mol Biol Cell 2001 Aug;12(8):2497-518 bud8 Mol Biol Cell 2002 Sep;13(9):2990-3004 Mol Biol Cell 2001 Jul;12(7):2147-70 Mol Biol Cell 2001 Aug;12(8):2497-518 J Cell Biol 2002 Mar 4;156(5):829-41 Genetics 1997 Mar;145(3):671-84 Mol Cell Biol 1996 Apr;16(4):1857-70 Mol Biol Cell 2000 Jan;11(1):183-99 Science 2001 May 18;292(5520):1376-8 Genetics 2001 Nov;159(3):919-28 EMBO J 2000 Dec 15;19(24):6686-96
L37016	0.0	N	bud8p (...) bud8 (...)
X15953	3e-99	N
NP_013457	0.0	P	bud8p (...) bud8 (...)
P41698	0.0	P
S51461	0.0	P
AAB67749	0.0	P	bud8p (...) bud8 (...)
AAA64518	0.0	P	bud8p (...) bud8 (...)
NP_011555	1e-34	P	bud9p J Cell Biol 2002 Mar 4;156(5):829-41 Mol Cell Biol 1996 Apr;16(4):1857-70 EMBO J 2000 Dec 15;19(24):6686-96 Mol Biol Cell 2001 Aug;12(8):2497-518 bud9 J Cell Biol 2002 Mar 4;156(5):829-41 Mol Cell Biol 1996 Apr;16(4):1857-70 Science 2001 May 18;292(5520):1376-8 Mol Biol Cell 2001 Jul;12(7):2147-70 EMBO J 2000 Dec 15;19(24):6686-96 Mol Biol Cell 2001 Aug;12(8):2497-518
P53226	1e-34	P
S64332	1e-34	P
CAA97039	1e-34	P	bud9p (...) bud9 (...)
CAA97041	2e-32	P	bud9p (...) bud9 (...)
AAG17454	4e-31	P	bud9p (...) bud9 (...)
References Summary:
Schenkman LR, Caruso C, Page N, Pringle JR
The role of cell cycle-regulated expression in the localization of spatial landmark proteins in yeast.
J Cell Biol 2002 Mar 4;156(5):829-41
PMID: 11877459
Cullen PJ, Sprague GF Jr
The roles of bud-site-selection proteins during haploid invasive growth in yeast.
Mol Biol Cell 2002 Sep;13(9):2990-3004
PMID: 12221111
Taheri N, Kohler T, Braus GH, Mosch HU
Asymmetrically localized Bud8p and Bud9p proteins control yeast cell polarity and development.
EMBO J 2000 Dec 15;19(24):6686-96
PMID: 11118203
Harkins HA, Page N, Schenkman LR, De Virgilio C, Shaw S, Bussey H, Pringle JR
Bud8p and Bud9p, proteins that may mark the sites for bipolar budding in yeast.
Mol Biol Cell 2001 Aug;12(8):2497-518
PMID: 11514631
Ni L, Snyder M
A genomic study of the bipolar bud site selection pattern in Saccharomyces cerevisiae.
Mol Biol Cell 2001 Jul;12(7):2147-70
PMID: 11452010
Mosch HU, Fink GR
Dissection of filamentous growth by transposon mutagenesis in Saccharomyces cerevisiae.
Genetics 1997 Mar;145(3):671-84
PMID: 9055077
Zahner JE, Harkins HA, Pringle JR
Genetic analysis of the bipolar pattern of bud site selection in the yeast Saccharomyces cerevisiae.
Mol Cell Biol 1996 Apr;16(4):1857-70
PMID: 8657162
Lorenz MC, Cutler NS, Heitman J
Characterization of alcohol-induced filamentous growth in Saccharomyces cerevisiae.
Mol Biol Cell 2000 Jan;11(1):183-99
PMID: 10637301
Kang PJ, Sanson A, Lee B, Park HO
A GDP/GTP exchange factor involved in linking a spatial landmark to cell polarity.
Science 2001 May 18;292(5520):1376-8
PMID: 11313501
Erdman S, Snyder M
A filamentous growth response mediated by the yeast mating pathway.
Genetics 2001 Nov;159(3):919-28
PMID: 11729141
Options:
Limit of E-value: 1e-20
Limit of Length: 100000
Limit of references returned each search: 40
Limit of retry times: 3
Direct references: Yes
Indirect references: Yes
Allow symbol with hyphen: Yes
Use stop word list: Yes
Thesaurus:
- Saccharomyces cerevisiae (Version: 20021123.0)



 
BLASTN 2.2.5 [Nov-16-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
RID: 1048224799-04260-20260
Query= 
         (1812 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences) 
           1,706,607 sequences; 7,920,131,457 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|609396|gb|U19102.1|YSCL9638 Saccharomyces cerevisiae chromoso...  3592   0.0  
gi|603471|gb|L37016.1|YSCBUD8A Saccharomyces cerevisiae BUD8 gen...  3477   0.0  
gi|4601|emb|X15953.1|SCTAL1 Saccharomyces cerevisiae TAL1 gene f...   371   3e-99
gi|14290358|gb|AC068642.25| Homo sapiens 12 BAC RP11-328J6 (Rosw...    42   2.9  
gi|22549852|gb|AC110592.5| Homo sapiens chromosome 15, clone CTD...    42   2.9  
gi|18497197|gb|AC092596.3| Homo sapiens BAC clone RP11-100J5 fro...    42   2.9  
gi|13443251|gb|AC012491.7| Homo sapiens BAC clone RP11-212J19 fr...    42   2.9  
gi|23504903|emb|AL929355.1|PFA929355 Plasmodium falciparum strai...    42   2.9  
gi|13810521|dbj|AP002515.3| Homo sapiens genomic DNA, chromosome...    42   2.9  
gi|14625383|dbj|AP001547.4| Homo sapiens genomic DNA, chromosome...    42   2.9  
gi|8705045|gb|AC018637.3|AC018637 Human Chromosome 7 clone RP11-...    42   2.9  
gi|14669248|emb|AL356277.18| Human DNA sequence from clone RP11-...    42   2.9  
gi|18476535|emb|AL160278.24| Human DNA sequence from clone RP11-...    42   2.9  
gi|12717990|emb|AL354668.13| Human DNA sequence from clone RP11-...    42   2.9  
gi|4150934|gb|AC005589.1|AC005589 Homo sapiens BAC clone RP11-16...    42   2.9  
gi|3419837|gb|AC005224.1|AC005224 Homo sapiens chromosome 17, cl...    42   2.9  
gi|8218277|emb|AL356834.1|NCB11B22 Neurospora crassa DNA linkage...    42   2.9  

ALIGNMENTS
>gi|609396|gb|U19102.1|YSCL9638 Saccharomyces cerevisiae chromosome XII cosmid 9638
          Length = 15175

 Score = 3592 bits (1812), Expect = 0.0
 Identities = 1812/1812 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgatacaatcagacgaagataatttggactcttctgaaacgacagcatcaacttcatat 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4894 atgatacaatcagacgaagataatttggactcttctgaaacgacagcatcaacttcatat 4953

                                                                        
Query: 61   agtggtacttcctctgtatcatccagactacaactaagaacatccttgttttttgaaaat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4954 agtggtacttcctctgtatcatccagactacaactaagaacatccttgttttttgaaaat 5013

                                                                        
Query: 121  cttaatggagcacatgggaaccccgatgcggagacagagatggctactgttgcctatgaa 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5014 cttaatggagcacatgggaaccccgatgcggagacagagatggctactgttgcctatgaa 5073

                                                                        
Query: 181  accacaagtagaggtcaaggatttgctgtatacatcaacaatgaaaggttttctcaaata 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5074 accacaagtagaggtcaaggatttgctgtatacatcaacaatgaaaggttttctcaaata 5133

                                                                        
Query: 241  atgggagcatccacaagctctagctctagtagcaactcgtcctctattacacaatttcac 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5134 atgggagcatccacaagctctagctctagtagcaactcgtcctctattacacaatttcac 5193

                                                                        
Query: 301  gatacccaagataataatataccaagcaacactactgtaaggccaacttcacttcgacga 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5194 gatacccaagataataatataccaagcaacactactgtaaggccaacttcacttcgacga 5253

                                                                        
Query: 361  gacaacgaggataccgtaccgttaaggaacgtaactccttcacaaaacgcggcggtacgg 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5254 gacaacgaggataccgtaccgttaaggaacgtaactccttcacaaaacgcggcggtacgg 5313

                                                                        
Query: 421  ccagaaagagcagtgaattcaccatcttcgcagagattaagttgcgcactgacaatatca 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5314 ccagaaagagcagtgaattcaccatcttcgcagagattaagttgcgcactgacaatatca 5373

                                                                        
Query: 481  acttcagttcttatgggagaagatgttgaaggaagccctatagagcaagagcatagtagg 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5374 acttcagttcttatgggagaagatgttgaaggaagccctatagagcaagagcatagtagg 5433

                                                                        
Query: 541  gtcgtatcttcattatactcatctttggcgaatcgcgggaacgacgagtcaaagaatgga 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5434 gtcgtatcttcattatactcatctttggcgaatcgcgggaacgacgagtcaaagaatgga 5493

                                                                        
Query: 601  acacctccacgtcctacctcaattgaacctaatgaaacaacggaacactcatttttctca 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5494 acacctccacgtcctacctcaattgaacctaatgaaacaacggaacactcatttttctca 5553

                                                                        
Query: 661  taccattacgatgacaccttagaaccagatgttgaagaggcagtgaggctaacgaagaat 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5554 taccattacgatgacaccttagaaccagatgttgaagaggcagtgaggctaacgaagaat 5613

                                                                        
Query: 721  aaaacttctaatgttaattttataagctcaactggcagtaaaggtgaaggcgagaccgag 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5614 aaaacttctaatgttaattttataagctcaactggcagtaaaggtgaaggcgagaccgag 5673

                                                                        
Query: 781  gatgaagtcatagatcaatacgaacctgtgaatgaatcaaaatttataccgcacaaacta 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5674 gatgaagtcatagatcaatacgaacctgtgaatgaatcaaaatttataccgcacaaacta 5733

                                                                        
Query: 841  aaaattccagagaaggctggatcaataaagtcgtcgacaagtgatgattcgcattcgcca 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5734 aaaattccagagaaggctggatcaataaagtcgtcgacaagtgatgattcgcattcgcca 5793

                                                                        
Query: 901  ggtgcgccaggtacgtcggcaaggaagattaaaattcctcagagtccatcgttaattggt 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5794 ggtgcgccaggtacgtcggcaaggaagattaaaattcctcagagtccatcgttaattggt 5853

                                                                        
Query: 961  aacatattgattccttcacacaatagtgacagtagtaacgaaagttctcctaaagaccat 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5854 aacatattgattccttcacacaatagtgacagtagtaacgaaagttctcctaaagaccat 5913

                                                                        
Query: 1021 atagggcataataatgaagaaaaattcagttcaaaatctacgcgcaagccctccacatcc 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5914 atagggcataataatgaagaaaaattcagttcaaaatctacgcgcaagccctccacatcc 5973

                                                                        
Query: 1081 ctagaagaagaaggtccaccaattggactaccttcaattcccgtattaagaagtgtgtcc 1140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5974 ctagaagaagaaggtccaccaattggactaccttcaattcccgtattaagaagtgtgtcc 6033

                                                                        
Query: 1141 ggaccaagcaaatggacgaagacacctttacgcttagaatctggaaattcaactaagtct 1200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6034 ggaccaagcaaatggacgaagacacctttacgcttagaatctggaaattcaactaagtct 6093

                                                                        
Query: 1201 gatccattttcacgctatgaaggacacaagacgccctctccattgaccaagatgaacaag 1260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6094 gatccattttcacgctatgaaggacacaagacgccctctccattgaccaagatgaacaag 6153

                                                                        
Query: 1261 aagaaaaataaaacgttgccagaacatggacaacccctcgtgctagctccaattaaatct 1320
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6154 aagaaaaataaaacgttgccagaacatggacaacccctcgtgctagctccaattaaatct 6213

                                                                        
Query: 1321 caaagctcggagtcagacacgggacagaactccattatagaaaagccagctcgaagcata 1380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6214 caaagctcggagtcagacacgggacagaactccattatagaaaagccagctcgaagcata 6273

                                                                        
Query: 1381 cgacgaaagcaacaagaaaaaactgataataggaaagaagacaggcacgatgctgaaaat 1440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6274 cgacgaaagcaacaagaaaaaactgataataggaaagaagacaggcacgatgctgaaaat 6333

                                                                        
Query: 1441 atagacctggaggcgagaatgccaattcaacatatcgataccgcttccattcattcgttt 1500
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6334 atagacctggaggcgagaatgccaattcaacatatcgataccgcttccattcattcgttt 6393

                                                                        
Query: 1501 gattcaggtcaaaatggattcagggacgtttacagcatcgaaaacatcattgtgatcctc 1560
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6394 gattcaggtcaaaatggattcagggacgtttacagcatcgaaaacatcattgtgatcctc 6453

                                                                        
Query: 1561 ctatgttgtagtatagtgccgccattattttttattattggctgcagctcaagaaggaaa 1620
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6454 ctatgttgtagtatagtgccgccattattttttattattggctgcagctcaagaaggaaa 6513

                                                                        
Query: 1621 ttagtttcagactatagattaatgaggttgcttatgaataaagaacaccgagcggctttg 1680
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6514 ttagtttcagactatagattaatgaggttgcttatgaataaagaacaccgagcggctttg 6573

                                                                        
Query: 1681 ctgcaaggattcatatgggacgttgatttaaggtggttccggatgttttgtctgatctta 1740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6574 ctgcaaggattcatatgggacgttgatttaaggtggttccggatgttttgtctgatctta 6633

                                                                        
Query: 1741 ggggctgccgaaacagtgattgtgatggccggtattgctattggatttggtgtgggtata 1800
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6634 ggggctgccgaaacagtgattgtgatggccggtattgctattggatttggtgtgggtata 6693

                        
Query: 1801 acacgtgaataa 1812
            ||||||||||||
Sbjct: 6694 acacgtgaataa 6705


>gi|603471|gb|L37016.1|YSCBUD8A Saccharomyces cerevisiae BUD8 gene, complete cds and transaldolase
            (TAL1) gene, partial cds
          Length = 2763

 Score = 3477 bits (1754), Expect = 0.0
 Identities = 1798/1812 (99%), Gaps = 3/1812 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgatacaatcagacgaagataatttggactcttctgaaacgacagcatcaacttcatat 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548  atgatacaatcagacgaagataatttggactcttctgaaacgacagcatcaacttcatat 607

                                                                        
Query: 61   agtggtacttcctctgtatcatccagactacaactaagaacatccttgttttttgaaaat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608  agtggtacttcctctgtatcatccagactacaactaagaacatccttgttttttgaaaat 667

                                                                        
Query: 121  cttaatggagcacatgggaaccccgatgcggagacagagatggctactgttgcctatgaa 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668  cttaatggagcacatgggaaccccgatgcggagacagagatggctactgttgcctatgaa 727

                                                                        
Query: 181  accacaagtagaggtcaaggatttgctgtatacatcaacaatgaaaggttttctcaaata 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728  accacaagtagaggtcaaggatttgctgtatacatcaacaatgaaaggttttctcaaata 787

                                                                        
Query: 241  atgggagcatccacaagctctagctctagtagcaactcgtcctctattacacaatttcac 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788  atgggagcatccacaagctctagctctagtagcaactcgtcctctattacacaatttcac 847

                                                                        
Query: 301  gatacccaagataataatataccaagcaacactactgtaaggccaacttcacttcgacga 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848  gatacccaagataataatataccaagcaacactactgtaaggccaacttcacttcgacga 907

                                                                        
Query: 361  gacaacgaggataccgtaccgttaaggaacgtaactccttcacaaaacgcggcggtacgg 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 908  gacaacgaggataccgtaccgttaaggaacgtaactccttcacaaaacgcggcggtatgg 967

                                                                        
Query: 421  ccagaaagagcagtgaattcaccatcttcgcagagattaagttgcgcactgacaatatca 480
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968  ccagaaagagcaatgaattcaccatcttcgcagagattaagttgcgcactgacaatatca 1027

                                                                        
Query: 481  acttcagttcttatgggagaagatgttgaaggaagccctatagagcaagagcatagtagg 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 acttcagttcttatgggagaagatgttgaaggaagccctatagagcaagagcatagtagg 1087

                                                                        
Query: 541  gtcgtatcttcattatactcatctttggcgaatcgcgggaacgacgagtcaaagaatgga 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 gtcgtatcttcattatactcatctttggcgaatcgcgggaacgacgagtcaaagaatgga 1147

                                                                        
Query: 601  acacctccacgtcctacctcaattgaacctaatgaaacaacggaacactcatttttctca 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1148 acacctccacgtcctacctcaattgaacctaatgaaacaacggaacactcatttttctca 1207

                                                                        
Query: 661  taccattacgatgacaccttagaaccagatgttgaagaggcagtgaggctaacgaagaat 720
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1208 tgccattacgatgacaccttagaaccagatgttgaagaggcagtgaggctaacgaagaat 1267

                                                                        
Query: 721  aaaacttctaatgttaattttataagctcaactggcagtaaaggtgaaggcgagaccgag 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1268 aaaacttctaatgttaattttataagctcaactggcagtaaaggtgaaggcgagaccgag 1327

                                                                        
Query: 781  gatgaagtcatagatcaatacgaacctgtgaatgaatcaaaatttataccgcacaaacta 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1328 gatgaagtcatagatcaatacgaacctgtgaatgaatcaaaatttataccgcacaaacta 1387

                                                                        
Query: 841  aaaattccagagaaggctggatcaataaagtcgtcgacaagtgatgattcgcattcgcca 900
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1388 aaaatcccagagaaggctggatcaataaagtcgtcgacaagtgatgattcgcattcgcca 1447

                                                                        
Query: 901  ggtgcgccaggtacgtcggcaaggaagattaaaattcctcagagtccatcgttaattggt 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1448 ggtgcgccaggtacgtcggcaaggaagattaaaattcctcagagtccatcgttaattggt 1507

                                                                        
Query: 961  aacatattgattccttcacacaatagtgacagtagtaacgaaagttctcctaaagaccat 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1508 aacatattgattccttcacacaatagtgacagtagtaacgaaagttctcctaaagaccat 1567

                                                                        
Query: 1021 atagggcataataatgaagaaaaattcagttcaaaatctacgcgcaagccctccacatcc 1080
            |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 1568 atagggcataataatgaagaaaaattcaattcaaaatctatgcgcaagccctccacatcc 1627

                                                                        
Query: 1081 ctagaagaagaaggtccaccaattggactaccttcaattcccgtattaagaagtgtgtcc 1140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1628 ctagaagaagaaggtccaccaattggactaccttcaattcccgtattaagaagtgtgtcc 1687

                                                                        
Query: 1141 ggaccaagcaaatggacgaagacacctttacgcttagaatctggaaattcaactaagtct 1200
            ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1688 ggacctagcaaatggacaaagacacctttacgcttagaatctggaaattcaactaagtct 1747

                                                                        
Query: 1201 gatccattttcacgctatgaaggacacaagacgccctctccattgaccaagatgaacaag 1260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 1748 gatccattttcacgctatgaaggacacaagacgccctctccattgaccaagatgaac--- 1804

                                                                        
Query: 1261 aagaaaaataaaacgttgccagaacatggacaacccctcgtgctagctccaattaaatct 1320
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1805 aagaaaaataaaacgttgccagaacatggacaacccctcgtgctagctccaattaaatct 1864

                                                                        
Query: 1321 caaagctcggagtcagacacgggacagaactccattatagaaaagccagctcgaagcata 1380
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1865 caaagctcggagtcagacacaggacagaactccattatagaaaagccagctcgaagcata 1924

                                                                        
Query: 1381 cgacgaaagcaacaagaaaaaactgataataggaaagaagacaggcacgatgctgaaaat 1440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1925 cgacgaaagcaacaagaaaaaactgataataggaaagaagacaggcacgatgctgaaaac 1984

                                                                        
Query: 1441 atagacctggaggcgagaatgccaattcaacatatcgataccgcttccattcattcgttt 1500
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1985 atagacctggaggcgagaatgccaattcaacatatcgataccgcttccattcattcgttt 2044

                                                                        
Query: 1501 gattcaggtcaaaatggattcagggacgtttacagcatcgaaaacatcattgtgatcctc 1560
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2045 gattcaggtcaaaatggattcagggacgtttacagcatcgaaaacatcattgtgatcctc 2104

                                                                        
Query: 1561 ctatgttgtagtatagtgccgccattattttttattattggctgcagctcaagaaggaaa 1620
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2105 ctatgttgtagtatagtgccgccattattttttattattggctgcagctcaagaaggaaa 2164

                                                                        
Query: 1621 ttagtttcagactatagattaatgaggttgcttatgaataaagaacaccgagcggctttg 1680
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2165 ttagtttcagactatagattaatgaggttgcttatgaataaagaacaccgagcggctttg 2224

                                                                        
Query: 1681 ctgcaaggattcatatgggacgttgatttaaggtggttccggatgttttgtctgatctta 1740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2225 ctgcaaggattcatatgggacgttgatttaaggtggttccggatgttttgtctgatctta 2284

                                                                        
Query: 1741 ggggctgccgaaacagtgattgtgatggccggtattgctattggatttggtgtgggtata 1800
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2285 ggggctgccgaaacagtgattgtgatggccggtattgctattggatttggtgtgggtata 2344

                        
Query: 1801 acacgtgaataa 1812
            |||| |||||||
Sbjct: 2345 acacttgaataa 2356


>gi|4601|emb|X15953.1|SCTAL1 Saccharomyces cerevisiae TAL1 gene for transaldolase (EC 2.2.1.2)
          Length = 2022

 Score =  371 bits (187), Expect = 3e-99
 Identities = 187/187 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1626 ttcagactatagattaatgaggttgcttatgaataaagaacaccgagcggctttgctgca 1685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2015 ttcagactatagattaatgaggttgcttatgaataaagaacaccgagcggctttgctgca 1956

                                                                        
Query: 1686 aggattcatatgggacgttgatttaaggtggttccggatgttttgtctgatcttaggggc 1745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1955 aggattcatatgggacgttgatttaaggtggttccggatgttttgtctgatcttaggggc 1896

                                                                        
Query: 1746 tgccgaaacagtgattgtgatggccggtattgctattggatttggtgtgggtataacacg 1805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1895 tgccgaaacagtgattgtgatggccggtattgctattggatttggtgtgggtataacacg 1836

                   
Query: 1806 tgaataa 1812
            |||||||
Sbjct: 1835 tgaataa 1829


>gi|14290358|gb|AC068642.25| Homo sapiens 12 BAC RP11-328J6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 59907

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1541  aaaacatcattgtgatcctcc 1561
             |||||||||||||||||||||
Sbjct: 50258 aaaacatcattgtgatcctcc 50238


>gi|22549852|gb|AC110592.5| Homo sapiens chromosome 15, clone CTD-2643L5, complete sequence
          Length = 146687

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 1387  aagcaacaagaaaaaactgataataggaa 1415
             |||||||||||||||| ||||||| ||||
Sbjct: 80794 aagcaacaagaaaaaaatgataatgggaa 80766


>gi|18497197|gb|AC092596.3| Homo sapiens BAC clone RP11-100J5 from 4, complete sequence
          Length = 175644

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1541   aaaacatcattgtgatcctcc 1561
              |||||||||||||||||||||
Sbjct: 102984 aaaacatcattgtgatcctcc 103004


>gi|13443251|gb|AC012491.7| Homo sapiens BAC clone RP11-212J19 from 2, complete sequence
          Length = 206504

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1541  aaaacatcattgtgatcctcc 1561
             |||||||||||||||||||||
Sbjct: 74143 aaaacatcattgtgatcctcc 74163


>gi|23504903|emb|AL929355.1|PFA929355 Plasmodium falciparum strain 3D7, chromosome 9; segment 1/5
          Length = 330050

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 726    ttctaatgttaattttataag 746
              |||||||||||||||||||||
Sbjct: 203744 ttctaatgttaattttataag 203764


>gi|13810521|dbj|AP002515.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-3159I7, complete
             sequences
          Length = 166063

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 849   agagaaggctggatcaataaa 869
             |||||||||||||||||||||
Sbjct: 47161 agagaaggctggatcaataaa 47141


>gi|14625383|dbj|AP001547.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-802F5, complete
             sequence
          Length = 144493

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1541  aaaacatcattgtgatcctcc 1561
             |||||||||||||||||||||
Sbjct: 15443 aaaacatcattgtgatcctcc 15463


>gi|8705045|gb|AC018637.3|AC018637 Human Chromosome 7 clone RP11-175P8, complete sequence
          Length = 184571

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 642  ggaacactcatttttctcata 662
            |||||||||||||||||||||
Sbjct: 9514 ggaacactcatttttctcata 9494


>gi|14669248|emb|AL356277.18| Human DNA sequence from clone RP11-554D15 on chromosome 6, complete
            sequence
          Length = 181891

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1541 aaaacatcattgtgatcctcc 1561
            |||||||||||||||||||||
Sbjct: 3520 aaaacatcattgtgatcctcc 3540


>gi|18476535|emb|AL160278.24| Human DNA sequence from clone RP11-574G7 on chromosome 9, complete
              sequence
          Length = 215399

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1248   caagatgaacaagaagaaaaa 1268
              |||||||||||||||||||||
Sbjct: 146728 caagatgaacaagaagaaaaa 146748


>gi|12717990|emb|AL354668.13| Human DNA sequence from clone RP11-506P24 on chromosome 13, complete
             sequence
          Length = 191652

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1776  tgctattggatttggtgtggg 1796
             |||||||||||||||||||||
Sbjct: 59717 tgctattggatttggtgtggg 59737


>gi|4150934|gb|AC005589.1|AC005589 Homo sapiens BAC clone RP11-161H12 from 7p14-p15, complete sequence
          Length = 132077

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 642    ggaacactcatttttctcata 662
              |||||||||||||||||||||
Sbjct: 126236 ggaacactcatttttctcata 126216


>gi|3419837|gb|AC005224.1|AC005224 Homo sapiens chromosome 17, clone hRPK.214_O_1, complete sequence
          Length = 166687

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 636   aacaacggaacactcatttttctca 660
             |||||| ||||||||||||||||||
Sbjct: 74034 aacaacagaacactcatttttctca 74058


>gi|8218277|emb|AL356834.1|NCB11B22 Neurospora crassa DNA linkage group II BAC clone B11B22
          Length = 73803

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 895   tcgccaggtgcgccaggtacg 915
             |||||||||||||||||||||
Sbjct: 32635 tcgccaggtgcgccaggtacg 32655


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
  or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 19, 2003 10:12 PM
  Number of letters in database: -669,803,131
  Number of sequences in database:  1,706,607
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,852,609
Number of Sequences: 1706607
Number of extensions: 8852609
Number of successful extensions: 48265
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48226
Number of HSP's gapped (non-prelim): 38
length of query: 1812
length of database: 7,920,131,457
effective HSP length: 22
effective length of query: 1790
effective length of database: 7,882,586,103
effective search space: 14109829124370
effective search space used: 14109829124370
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)






 
BLASTX 2.2.5 [Nov-16-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
RID: 1048224807-04293-22503
Query= 
         (1812 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           1,375,764 sequences; 441,946,756 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6323385|ref|NP_013457.1| marks and directs bud emergence to t...  1046   0.0  
gi|603472|gb|AAA64518.1| Bud8p                                       1028   0.0  
gi|6321478|ref|NP_011555.1| among a group of genes whose product...   149   1e-34
gi|1945317|emb|CAA97041.1| ORF YGR041w [Saccharomyces cerevisiae]     142   2e-32
gi|10442731|gb|AAG17454.1|AF302239_1 Bud9 [Saccharomyces cerevis...   137   4e-31
gi|19114669|ref|NP_593757.1| hypothetical protein [Schizosacchar...    42   0.025
gi|790604|gb|AAA85853.1| UNC-44                                        39   0.36 
gi|17542700|ref|NP_500898.1| UNCoordinated locomotion UNC-44, Un...    39   0.36 
gi|1814196|gb|AAB41827.1| AO13 ankyrin [Caenorhabditis elegans]        39   0.36 
gi|23820861|gb|AAA93447.2| Uncoordinated protein 44, isoform f [...    39   0.36 
gi|9971154|dbj|BAB12429.1| mkpA [Dictyostelium discoideum]             37   1.0  
gi|11358102|pir||T48477 hypothetical protein T1E3.170 - Arabidop...    35   3.0  
gi|790602|gb|AAA85852.1| UNC-44                                        35   3.0  
gi|17542696|ref|NP_500900.1| UNCoordinated locomotion UNC-44, An...    35   3.0  
gi|17542694|ref|NP_500901.1| UNCoordinated locomotion UNC-44, Un...    35   3.0  
gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible pr...    35   3.0  
gi|14715476|dbj|BAB62042.1| Endo-beta-N-acetylglucosaminidase D ...    35   3.9  
gi|23027628|ref|ZP_00066066.1| hypothetical protein [Microbulbif...    35   3.9  
gi|172526|gb|AAA35015.1| S1 protein                                    35   3.9  
gi|6322209|ref|NP_012284.1| Required for invasion and pseudohyph...    35   3.9  
gi|21902026|dbj|BAC05576.1| B1097D05.27 [Oryza sativa (japonica ...    35   3.9  
gi|23490214|gb|EAA22044.1| ERYTHROCYTE MEMBRANE PROTEIN PFEMP3 [...    35   5.2  
gi|25395700|pir||H88444 protein C26E6.12 [imported] - Caenorhabd...    35   5.2  
gi|27676018|ref|XP_222568.1| similar to KIAA0622 protein - human...    35   5.2  
gi|23612359|ref|NP_703939.1| P. falciparum PK4 protein kinase [P...    35   5.2  
gi|17552318|ref|NP_498040.1| SET (trithorax/polycomb) domain con...    35   5.2  
gi|17552316|ref|NP_498041.1| SET (trithorax/polycomb) domain con...    35   5.2  
gi|17552320|ref|NP_498039.1| SET (trithorax/polycomb) domain con...    35   5.2  
gi|17509105|ref|NP_492699.1| Protein kinase with conserved C ter...    34   6.7  
gi|17221118|gb|AAK61486.1| glycoprotein gp2 [Equine herpesvirus 4]     34   6.7  
gi|23040234|gb|ZP_00071755.1| hypothetical protein [Trichodesmiu...    34   6.7  
gi|17221120|gb|AAK61487.1| glycoprotein gp2 [Equine herpesvirus 4]     34   6.7  
gi|17221122|gb|AAK61488.1| glycoprotein gp2 [Equine herpesvirus 4]     34   6.7  
gi|9629801|ref|NP_045288.1| 71 [Equine herpesvirus 4] >gi|112782...    34   6.7  
gi|17221126|gb|AAK61490.1| glycoprotein gp2 [Equine herpesvirus 4]     34   6.7  
gi|17221124|gb|AAK61489.1| glycoprotein gp2 [Equine herpesvirus 4]     34   6.7  
gi|23488355|gb|EAA21287.1| Regulator of chromosome condensation,...    34   8.8  
gi|15900412|ref|NP_345016.1| endo-beta-N-acetylglucosaminidase, ...    34   8.8  

ALIGNMENTS
>gi|6323385|ref|NP_013457.1| marks and directs bud emergence to the distal pole of diploid cells;
            Bud8p [Saccharomyces cerevisiae]
 gi|3123185|sp|P41698|BUD8_YEAST BUD SITE SELECTION PROTEIN BUD8
 gi|1077039|pir||S51461 BUD8 protein - yeast (Saccharomyces cerevisiae)
 gi|609399|gb|AAB67749.1| Bud8p [Saccharomyces cerevisiae]
          Length = 603

 Score = 1046 bits (2704), Expect = 0.0
 Identities = 531/603 (88%), Positives = 531/603 (88%)
 Frame = +1

Query: 1    MIQSDEDNLDXXXXXXXXXXXXXXXXXXRLQLRTSLFFENLNGAHGNPDAETEMATVAYE 180
            MIQSDEDNLD                  RLQLRTSLFFENLNGAHGNPDAETEMATVAYE
Sbjct: 1    MIQSDEDNLDSSETTASTSYSGTSSVSSRLQLRTSLFFENLNGAHGNPDAETEMATVAYE 60

Query: 181  TTSRGQGFAVYINNERFSQIMGAXXXXXXXXXXXXITQFHDTQDNNIPSNTTVRPTSLRR 360
            TTSRGQGFAVYINNERFSQIMGA            ITQFHDTQDNNIPSNTTVRPTSLRR
Sbjct: 61   TTSRGQGFAVYINNERFSQIMGASTSSSSSSNSSSITQFHDTQDNNIPSNTTVRPTSLRR 120

Query: 361  DNEDTVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTISTSVLMGEDVEGSPIEQEHSR 540
            DNEDTVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTISTSVLMGEDVEGSPIEQEHSR
Sbjct: 121  DNEDTVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTISTSVLMGEDVEGSPIEQEHSR 180

Query: 541  VVSSLYSSLANRGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVEEAVRLTKN 720
            VVSSLYSSLANRGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVEEAVRLTKN
Sbjct: 181  VVSSLYSSLANRGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVEEAVRLTKN 240

Query: 721  KTSNVNFISSTGSKGEGETEDEVIDQYEPVNESKFIPHKLKIPEKAGXXXXXXXXXXXXP 900
            KTSNVNFISSTGSKGEGETEDEVIDQYEPVNESKFIPHKLKIPEKAG            P
Sbjct: 241  KTSNVNFISSTGSKGEGETEDEVIDQYEPVNESKFIPHKLKIPEKAGSIKSSTSDDSHSP 300

Query: 901  GAPGTSARKIKIPQSPSLIGNILIXXXXXXXXXXXXXXXXIGHNNEEKFSSKSTRKPSTS 1080
            GAPGTSARKIKIPQSPSLIGNILI                IGHNNEEKFSSKSTRKPSTS
Sbjct: 301  GAPGTSARKIKIPQSPSLIGNILIPSHNSDSSNESSPKDHIGHNNEEKFSSKSTRKPSTS 360

Query: 1081 LEEEGPPIGLPSIPVLRSVSGPSKWTKTPLRLESGNSTKSDPFSRYEGHKTPSXXXXXXX 1260
            LEEEGPPIGLPSIPVLRSVSGPSKWTKTPLRLESGNSTKSDPFSRYEGHKTPS       
Sbjct: 361  LEEEGPPIGLPSIPVLRSVSGPSKWTKTPLRLESGNSTKSDPFSRYEGHKTPSPLTKMNK 420

Query: 1261 XXXXXXXEHGQPLVLAPIKSQSSESDTGQNSIIEKPARSIRRKQQEKTDNRKEDRHDAEN 1440
                   EHGQPLVLAPIKSQSSESDTGQNSIIEKPARSIRRKQQEKTDNRKEDRHDAEN
Sbjct: 421  KKNKTLPEHGQPLVLAPIKSQSSESDTGQNSIIEKPARSIRRKQQEKTDNRKEDRHDAEN 480

Query: 1441 IDLEARMPIQHIDTASIHSFDSGQNGFRDVYSIENIIVILLCCSIVPPLFFIIGCSSRRK 1620
            IDLEARMPIQHIDTASIHSFDSGQNGFRDVYSIENIIVILLCCSIVPPLFFIIGCSSRRK
Sbjct: 481  IDLEARMPIQHIDTASIHSFDSGQNGFRDVYSIENIIVILLCCSIVPPLFFIIGCSSRRK 540

Query: 1621 LVSDYRLMRLLMNKEHRAALLQGFIWDVDLRWFRMFCLILGAAETVIVMAGIAIGFGVGI 1800
            LVSDYRLMRLLMNKEHRAALLQGFIWDVDLRWFRMFCLILGAAETVIVMAGIAIGFGVGI
Sbjct: 541  LVSDYRLMRLLMNKEHRAALLQGFIWDVDLRWFRMFCLILGAAETVIVMAGIAIGFGVGI 600

Query: 1801 TRE 1809
            TRE
Sbjct: 601  TRE 603


>gi|603472|gb|AAA64518.1| Bud8p
          Length = 602

 Score = 1028 bits (2657), Expect = 0.0
 Identities = 525/603 (87%), Positives = 527/603 (87%)
 Frame = +1

Query: 1    MIQSDEDNLDXXXXXXXXXXXXXXXXXXRLQLRTSLFFENLNGAHGNPDAETEMATVAYE 180
            MIQSDEDNLD                  RLQLRTSLFFENLNGAHGNPDAETEMATVAYE
Sbjct: 1    MIQSDEDNLDSSETTASTSYSGTSSVSSRLQLRTSLFFENLNGAHGNPDAETEMATVAYE 60

Query: 181  TTSRGQGFAVYINNERFSQIMGAXXXXXXXXXXXXITQFHDTQDNNIPSNTTVRPTSLRR 360
            TTSRGQGFAVYINNERFSQIMGA            ITQFHDTQDNNIPSNTTVRPTSLRR
Sbjct: 61   TTSRGQGFAVYINNERFSQIMGASTSSSSSSNSSSITQFHDTQDNNIPSNTTVRPTSLRR 120

Query: 361  DNEDTVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTISTSVLMGEDVEGSPIEQEHSR 540
            DNEDTVPLRNVTPSQNAAV PERA+NSPSSQRLSCALTISTSVLMGEDVEGSPIEQEHSR
Sbjct: 121  DNEDTVPLRNVTPSQNAAVWPERAMNSPSSQRLSCALTISTSVLMGEDVEGSPIEQEHSR 180

Query: 541  VVSSLYSSLANRGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVEEAVRLTKN 720
            VVSSLYSSLANRGNDESKNGTPPRPTSIEPNETTEHSFFS HYDDTLEPDVEEAVRLTKN
Sbjct: 181  VVSSLYSSLANRGNDESKNGTPPRPTSIEPNETTEHSFFSCHYDDTLEPDVEEAVRLTKN 240

Query: 721  KTSNVNFISSTGSKGEGETEDEVIDQYEPVNESKFIPHKLKIPEKAGXXXXXXXXXXXXP 900
            KTSNVNFISSTGSKGEGETEDEVIDQYEPVNESKFIPHKLKIPEKAG            P
Sbjct: 241  KTSNVNFISSTGSKGEGETEDEVIDQYEPVNESKFIPHKLKIPEKAGSIKSSTSDDSHSP 300

Query: 901  GAPGTSARKIKIPQSPSLIGNILIXXXXXXXXXXXXXXXXIGHNNEEKFSSKSTRKPSTS 1080
            GAPGTSARKIKIPQSPSLIGNILI                IGHNNEEKF+SKS RKPSTS
Sbjct: 301  GAPGTSARKIKIPQSPSLIGNILIPSHNSDSSNESSPKDHIGHNNEEKFNSKSMRKPSTS 360

Query: 1081 LEEEGPPIGLPSIPVLRSVSGPSKWTKTPLRLESGNSTKSDPFSRYEGHKTPSXXXXXXX 1260
            LEEEGPPIGLPSIPVLRSVSGPSKWTKTPLRLESGNSTKSDPFSRYEGHKTPS       
Sbjct: 361  LEEEGPPIGLPSIPVLRSVSGPSKWTKTPLRLESGNSTKSDPFSRYEGHKTPS-PLTKMN 419

Query: 1261 XXXXXXXEHGQPLVLAPIKSQSSESDTGQNSIIEKPARSIRRKQQEKTDNRKEDRHDAEN 1440
                   EHGQPLVLAPIKSQSSESDTGQNSIIEKPARSIRRKQQEKTDNRKEDRHDAEN
Sbjct: 420  KKNKTLPEHGQPLVLAPIKSQSSESDTGQNSIIEKPARSIRRKQQEKTDNRKEDRHDAEN 479

Query: 1441 IDLEARMPIQHIDTASIHSFDSGQNGFRDVYSIENIIVILLCCSIVPPLFFIIGCSSRRK 1620
            IDLEARMPIQHIDTASIHSFDSGQNGFRDVYSIENIIVILLCCSIVPPLFFIIGCSSRRK
Sbjct: 480  IDLEARMPIQHIDTASIHSFDSGQNGFRDVYSIENIIVILLCCSIVPPLFFIIGCSSRRK 539

Query: 1621 LVSDYRLMRLLMNKEHRAALLQGFIWDVDLRWFRMFCLILGAAETVIVMAGIAIGFGVGI 1800
            LVSDYRLMRLLMNKEHRAALLQGFIWDVDLRWFRMFCLILGAAETVIVMAGIAIGFGVGI
Sbjct: 540  LVSDYRLMRLLMNKEHRAALLQGFIWDVDLRWFRMFCLILGAAETVIVMAGIAIGFGVGI 599

Query: 1801 TRE 1809
            T E
Sbjct: 600  TLE 602


>gi|6321478|ref|NP_011555.1| among a group of genes whose products are necessary for bud-site
            selection; likely involvement in positioning the proximal
            pole signal; Bud9p [Saccharomyces cerevisiae]
 gi|1705514|sp|P53226|BUD9_YEAST Bud site selection protein BUD9
 gi|2132592|pir||S64332 probable membrane protein YGR041w - yeast (Saccharomyces cerevisiae)
 gi|1323039|emb|CAA97039.1| ORF YGR041w [Saccharomyces cerevisiae]
          Length = 547

 Score =  149 bits (376), Expect = 1e-34
 Identities = 147/563 (26%), Positives = 225/563 (39%), Gaps = 21/563 (3%)
 Frame = +1

Query: 184  TSRGQGFAVYINNERFSQIMGAXXXXXXXXXXXXITQFHDTQDNNI--PSNTTVRPTSLR 357
            +S  + + VYI++ ++S+I+                 F D +D+N    S+  +  + L 
Sbjct: 59   SSEVKSYNVYIDDSKYSEILKGDTNSSSTDGKQV---FEDARDDNFHQESHRDLEDSILD 115

Query: 358  RDNEDTVPLRNVTPSQNAAVRPERAVNSPSSQRL----SCALTISTSVLMGE-DVEGSPI 522
                D        P  N+  R   + N  S++      S + TISTSVL+     E    
Sbjct: 116  LVRRDPEVAAFPLPPPNSNERNRNSSNGSSAETNLNGHSSSGTISTSVLLNMGSAEKHAG 175

Query: 523  EQEHSRVVSSLYSSLANRGNDESKNGTPPRP---------TSIEPNETTE-----HSFFS 660
                  + SS   S    G   S    PP            ++  N++T      +SF S
Sbjct: 176  TTRGDHMESSSMKSFEKLGTRPSSLFYPPPEGTAPYQGPRATVSGNKSTRQTQGTYSFPS 235

Query: 661  YHYDDTLEPDVEEAVRLTKNKTSNVNFISSTGSKGEGETEDEVIDQYEPVNESKFIPHKL 840
              Y   L   VE AV + K++  N     +   K                    FIPH+ 
Sbjct: 236  MRYGVDLVSPVEGAVDVAKSRVPNSTLNGTFPDKA-------------------FIPHEF 276

Query: 841  KIPEKAGXXXXXXXXXXXXPGAPGTSARKIKIPQSPSLIGNILIXXXXXXXXXXXXXXXX 1020
            +IP+KA                P   +  +K P++ SL+ +IL                 
Sbjct: 277  QIPKKAWNRI------------PANKSTSLKTPRNHSLLIDILKPFEAADLA-------- 316

Query: 1021 IGHNNEEKFSSKSTRKPSTSLEEEGPPIGLPSIPVLRSVSGPSKWTKTPLRLESGNSTKS 1200
                N+++ SS   +    S  +  P                ++ + T ++ +   +T  
Sbjct: 317  ----NDQRSSSAVLKNTVHSNGQYNPT---------------NETSGTRMQDQRQKNTNE 357

Query: 1201 DPFSRYEGHKTPSXXXXXXXXXXXXXXEHGQPLVLAPIKSQSSESDTGQNSIIEKPARSI 1380
                +    + P               E          K   S  + G  S + K   SI
Sbjct: 358  IDLEKIPNPQVPLGIAMDTMRSPNQLHE----------KEYESNIEAGLASGVGKGDNSI 407

Query: 1381 RRKQQEKTDNRKEDRHDAENIDLEARMPIQHIDTASIHSFDSGQNGFRDVYSIENIIVIL 1560
            ++ Q +K   ++ DR    +  +E  MPIQ ID++SI SFDS   GF ++YSI  +I  L
Sbjct: 408  KQHQYKKIP-QEIDRDQQLSFQMET-MPIQRIDSSSIRSFDSRIYGFSEIYSIPRVITTL 465

Query: 1561 LCCSIVPPLFFIIGCSSRRKLVSDYRLMRLLMNKEHRAALLQGFIWDVDLRWFRMFCLIL 1740
              C  VPPLFF    +     VS+YRLMR++MN EHR  LL+GF WD+D++WFR  C +L
Sbjct: 466  CICLFVPPLFFFFSINGNNG-VSNYRLMRMIMNYEHRIGLLKGFEWDIDVQWFRTLCFVL 524

Query: 1741 GAAETVIVMAGIAIGFGVGITRE 1809
            G  E + + A I IGFGVGI RE
Sbjct: 525  GCIEMLAIFASIGIGFGVGIIRE 547


>gi|1945317|emb|CAA97041.1| ORF YGR041w [Saccharomyces cerevisiae]
          Length = 428

 Score =  142 bits (357), Expect = 2e-32
 Identities = 134/490 (27%), Positives = 198/490 (40%), Gaps = 19/490 (3%)
 Frame = +1

Query: 397  PSQNAAVRPERAVNSPSSQRL----SCALTISTSVLMGE-DVEGSPIEQEHSRVVSSLYS 561
            P  N+  R   + N  S++      S + TISTSVL+     E          + SS   
Sbjct: 10   PPPNSNERNRNSSNGSSAETNLNGHSSSGTISTSVLLNMGSAEKHAGTTRGDHMESSSMK 69

Query: 562  SLANRGNDESKNGTPPRP---------TSIEPNETTE-----HSFFSYHYDDTLEPDVEE 699
            S    G   S    PP            ++  N++T      +SF S  Y   L   VE 
Sbjct: 70   SFEKLGTRPSSLFYPPPEGTAPYQGPRATVSGNKSTRQTQGTYSFPSMRYGVDLVSPVEG 129

Query: 700  AVRLTKNKTSNVNFISSTGSKGEGETEDEVIDQYEPVNESKFIPHKLKIPEKAGXXXXXX 879
            AV + K++  N     +   K                    FIPH+ +IP+KA       
Sbjct: 130  AVDVAKSRVPNSTLNGTFPDKA-------------------FIPHEFQIPKKAWNRI--- 167

Query: 880  XXXXXXPGAPGTSARKIKIPQSPSLIGNILIXXXXXXXXXXXXXXXXIGHNNEEKFSSKS 1059
                     P   +  +K P++ SL+ +IL                     N+++ SS  
Sbjct: 168  ---------PANKSTSLKTPRNHSLLIDILKPFEAADLA------------NDQRSSSAV 206

Query: 1060 TRKPSTSLEEEGPPIGLPSIPVLRSVSGPSKWTKTPLRLESGNSTKSDPFSRYEGHKTPS 1239
             +    S  +  P                ++ + T ++ +   +T      +    + P 
Sbjct: 207  LKNTVHSNGQYNPT---------------NETSGTRMQDQRQKNTNEIDLEKIPNPQVPL 251

Query: 1240 XXXXXXXXXXXXXXEHGQPLVLAPIKSQSSESDTGQNSIIEKPARSIRRKQQEKTDNRKE 1419
                          E          K   S  + G  S + K   SI++ Q +K   ++ 
Sbjct: 252  GIAMDTMRSPNQLHE----------KEYESNIEAGLASGVGKGDNSIKQHQYKKIP-QEI 300

Query: 1420 DRHDAENIDLEARMPIQHIDTASIHSFDSGQNGFRDVYSIENIIVILLCCSIVPPLFFII 1599
            DR    +  +E  MPIQ ID++SI SFDS   GF ++YSI  +I  L  C  VPPLFF  
Sbjct: 301  DRDQQLSFQMET-MPIQRIDSSSIRSFDSRIYGFSEIYSIPRVITTLCICLFVPPLFFFF 359

Query: 1600 GCSSRRKLVSDYRLMRLLMNKEHRAALLQGFIWDVDLRWFRMFCLILGAAETVIVMAGIA 1779
              +     VS+YRLMR++MN EHR  LL+GF WD+D++WFR  C +LG  E + + A I 
Sbjct: 360  SINGNNG-VSNYRLMRMIMNYEHRIGLLKGFEWDIDVQWFRTLCFVLGCIEMLAIFASIG 418

Query: 1780 IGFGVGITRE 1809
            IGFGVGI RE
Sbjct: 419  IGFGVGIIRE 428


>gi|10442731|gb|AAG17454.1|AF302239_1 Bud9 [Saccharomyces cerevisiae]
          Length = 547

 Score =  137 bits (346), Expect = 4e-31
 Identities = 74/165 (44%), Positives = 99/165 (60%)
 Frame = +1

Query: 1315 KSQSSESDTGQNSIIEKPARSIRRKQQEKTDNRKEDRHDAENIDLEARMPIQHIDTASIH 1494
            K   S  + G  S + K    I++ Q +K   ++ DR    +  +E  MPIQ ID++SI 
Sbjct: 386  KEYESNIEAGLASGVGKGDNGIKQHQYKKIP-QEIDRDQQLSFQMET-MPIQRIDSSSIR 443

Query: 1495 SFDSGQNGFRDVYSIENIIVILLCCSIVPPLFFIIGCSSRRKLVSDYRLMRLLMNKEHRA 1674
            SFDS    F ++YSI  +I  L  C  VPPLFF    +     VS+YRLMR++MN EHR 
Sbjct: 444  SFDSRIYDFSEIYSIPRVITTLCICLFVPPLFFFFSVNGNNG-VSNYRLMRMIMNYEHRI 502

Query: 1675 ALLQGFIWDVDLRWFRMFCLILGAAETVIVMAGIAIGFGVGITRE 1809
             LL+GF WD+D++WFR  C +LG  E + + A I IGFGVGITRE
Sbjct: 503  GLLKGFEWDIDVQWFRTLCFVLGCIEMLAIFASIGIGFGVGITRE 547



 Score = 36.6 bits (83), Expect = 1.4
 Identities = 67/291 (23%), Positives = 104/291 (35%), Gaps = 29/291 (9%)
 Frame = +1

Query: 184 TSRGQGFAVYINNERFSQIMGAXXXXXXXXXXXXITQFHDTQDNNIPSNTTVRPTSLRRD 363
           +S  + + VYI++ ++S+I+                 F D +D+N    +        RD
Sbjct: 59  SSEVKSYNVYIDDSKYSEILKGDTNSSSTDGKQV---FEDARDDNFHQES-------HRD 108

Query: 364 NEDTVPLRNVTPSQNAAVRP-------ERAVNSPSSQRLSCAL-------TISTSVLMGE 501
            ED++ L  V      A  P       ER  NS +       L       TISTSVL+  
Sbjct: 109 LEDSI-LDLVRRDPEVAAFPLPPPSSNERNRNSSNGSSAETNLNGHSSSGTISTSVLLNM 167

Query: 502 -DVEGSPIEQEHSRVVSSLYSSLANRGNDESKNGTPPRP---------TSIEPNETTE-- 645
              E          + SS   S    G   S    PP            ++  N++T   
Sbjct: 168 GSAEKHAGTTRGDHMESSSMKSFEKLGTRPSSLFYPPPEGTAPYQGPRATVSGNKSTRQT 227

Query: 646 ---HSFFSYHYDDTLEPDVEEAVRLTKNKTSNVNFISSTGSKGEGETEDEVIDQYEPVNE 816
              +SF S  Y   L   VE  V + K++  N N ++ T                    +
Sbjct: 228 QGTYSFPSMRYGVDLVSPVEGTVDVAKSRVPN-NTLNGT------------------FPD 268

Query: 817 SKFIPHKLKIPEKAGXXXXXXXXXXXXPGAPGTSARKIKIPQSPSLIGNIL 969
             FIPH+ +IP+KA                P   +  +K P++ SL+ +IL
Sbjct: 269 KAFIPHEFQIPKKAWNR------------IPANKSTSLKTPKNHSLLIDIL 307


>gi|19114669|ref|NP_593757.1| hypothetical protein [Schizosaccharomyces pombe]
 gi|3183327|sp|O14207|YDT2_SCHPO Hypothetical protein C6B12.02c in chromosome I
 gi|7491200|pir||T39009 hypothetical protein SPAC6B12.02c - fission yeast
           (Schizosaccharomyces pombe)
 gi|2330834|emb|CAB11064.1| hypothetical protein; similar to N. crassa B8B20.20
           [Schizosaccharomyces pombe]
          Length = 1888

 Score = 42.4 bits (98), Expect = 0.025
 Identities = 38/154 (24%), Positives = 69/154 (44%)
 Frame = +1

Query: 301 DTQDNNIPSNTTVRPTSLRRDNEDTVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTIS 480
           D    NI SN+TV   +L+   +    LR V P     ++ ++ + +   ++ +   ++ 
Sbjct: 249 DQSMTNISSNSTVSDLNLKTLKKR---LRGVLPPSFLTLQEKKKLENRGVKKKT---SLH 302

Query: 481 TSVLMGEDVEGSPIEQEHSRVVSSLYSSLANRGNDESKNGTPPRPTSIEPNETTEHSFFS 660
            SV+ GE ++G    + H R  + L S L N  +D   + + P PT     +T+E     
Sbjct: 303 KSVIEGEKIKGVARRKLHPRSTAKLSSELGNEISDSDNSISTPTPTDDSRFDTSEFLDSI 362

Query: 661 YHYDDTLEPDVEEAVRLTKNKTSNVNFISSTGSK 762
              +  L+ DV + + L K   S +   SS  S+
Sbjct: 363 SRDNGWLKEDVVDQLWLPKRSLSALKKSSSLTSE 396


>gi|790604|gb|AAA85853.1| UNC-44
          Length = 970

 Score = 38.5 bits (88), Expect = 0.36
 Identities = 37/161 (22%), Positives = 67/161 (41%), Gaps = 7/161 (4%)
 Frame = +1

Query: 298  HDTQDNNIPSNTTVRPT-----SLRRDNED-TVPLRNVTPSQNAAVRPERAVNSPSSQRL 459
            HD++D  +    T+  T     ++  +  D TVPL      +   +      +SPS  + 
Sbjct: 781  HDSEDGPVVEERTITTTYEDDVAVNENIVDRTVPLNEDEQQKWEELNRLADESSPSPAQR 840

Query: 460  SCALTISTSVLMGEDVEGSPIEQEHSRVVSSLYSSLANRGN-DESKNGTPPRPTSIEPNE 636
            S  +  STS  + EDVE S   + H     ++ ++     +  ES +G+P R  S+EP E
Sbjct: 841  STIVAESTSEQVPEDVEQSVESESHREDDGTIVTTTVTTSHISESPSGSPTR-RSVEPEE 899

Query: 637  TTEHSFFSYHYDDTLEPDVEEAVRLTKNKTSNVNFISSTGS 759
                    +      +   +++    K +T+   F +  GS
Sbjct: 900  HRHSQHEDHEASGAEQHSGQDSGTTQKKETAEEGFTNEDGS 940


>gi|17542700|ref|NP_500898.1| UNCoordinated locomotion UNC-44, Unc-44 protein family member (204.3
            kD) (unc-44) [Caenorhabditis elegans]
 gi|1208874|gb|AAA93444.1| Uncoordinated protein 44, isoform c [Caenorhabditis elegans]
 gi|1814197|gb|AAB41828.1| AO66 ankyrin [Caenorhabditis elegans]
          Length = 1867

 Score = 38.5 bits (88), Expect = 0.36
 Identities = 37/161 (22%), Positives = 67/161 (41%), Gaps = 7/161 (4%)
 Frame = +1

Query: 298  HDTQDNNIPSNTTVRPT-----SLRRDNED-TVPLRNVTPSQNAAVRPERAVNSPSSQRL 459
            HD++D  +    T+  T     ++  +  D TVPL      +   +      +SPS  + 
Sbjct: 1678 HDSEDGPVVEERTITTTYEDDVAVNENIVDRTVPLNEDEQQKWEELNRLADESSPSPAQR 1737

Query: 460  SCALTISTSVLMGEDVEGSPIEQEHSRVVSSLYSSLANRGN-DESKNGTPPRPTSIEPNE 636
            S  +  STS  + EDVE S   + H     ++ ++     +  ES +G+P R  S+EP E
Sbjct: 1738 STIVAESTSEQVPEDVEQSVESESHREDDGTIVTTTVTTSHISESPSGSPTR-RSVEPEE 1796

Query: 637  TTEHSFFSYHYDDTLEPDVEEAVRLTKNKTSNVNFISSTGS 759
                    +      +   +++    K +T+   F +  GS
Sbjct: 1797 HRHSQHEDHEASGAEQHSGQDSGTTQKKETAEEGFTNEDGS 1837


>gi|1814196|gb|AAB41827.1| AO13 ankyrin [Caenorhabditis elegans]
          Length = 6994

 Score = 38.5 bits (88), Expect = 0.36
 Identities = 37/161 (22%), Positives = 67/161 (41%), Gaps = 7/161 (4%)
 Frame = +1

Query: 298  HDTQDNNIPSNTTVRPT-----SLRRDNED-TVPLRNVTPSQNAAVRPERAVNSPSSQRL 459
            HD++D  +    T+  T     ++  +  D TVPL      +   +      +SPS  + 
Sbjct: 1684 HDSEDGPVVEERTITTTYEDDVAVNENIVDRTVPLNEDEQQKWEELNRLADESSPSPAQR 1743

Query: 460  SCALTISTSVLMGEDVEGSPIEQEHSRVVSSLYSSLANRGN-DESKNGTPPRPTSIEPNE 636
            S  +  STS  + EDVE S   + H     ++ ++     +  ES +G+P R  S+EP E
Sbjct: 1744 STIVAESTSEQVPEDVEQSVESESHREDDGTIVTTTVTTSHISESPSGSPTR-RSVEPEE 1802

Query: 637  TTEHSFFSYHYDDTLEPDVEEAVRLTKNKTSNVNFISSTGS 759
                    +      +   +++    K +T+   F +  GS
Sbjct: 1803 HRHSQHEDHEASGAEQHSGQDSGTTQKKETAEEGFTNEDGS 1843


>gi|23820861|gb|AAA93447.2| Uncoordinated protein 44, isoform f [Caenorhabditis elegans]
          Length = 6994

 Score = 38.5 bits (88), Expect = 0.36
 Identities = 37/161 (22%), Positives = 67/161 (41%), Gaps = 7/161 (4%)
 Frame = +1

Query: 298  HDTQDNNIPSNTTVRPT-----SLRRDNED-TVPLRNVTPSQNAAVRPERAVNSPSSQRL 459
            HD++D  +    T+  T     ++  +  D TVPL      +   +      +SPS  + 
Sbjct: 1684 HDSEDGPVVEERTITTTYEDDVAVNENIVDRTVPLNEDEQQKWEELNRLADESSPSPAQR 1743

Query: 460  SCALTISTSVLMGEDVEGSPIEQEHSRVVSSLYSSLANRGN-DESKNGTPPRPTSIEPNE 636
            S  +  STS  + EDVE S   + H     ++ ++     +  ES +G+P R  S+EP E
Sbjct: 1744 STIVAESTSEQVPEDVEQSVESESHREDDGTIVTTTVTTSHISESPSGSPTR-RSVEPEE 1802

Query: 637  TTEHSFFSYHYDDTLEPDVEEAVRLTKNKTSNVNFISSTGS 759
                    +      +   +++    K +T+   F +  GS
Sbjct: 1803 HRHSQHEDHEASGAEQHSGQDSGTTQKKETAEEGFTNEDGS 1843


>gi|9971154|dbj|BAB12429.1| mkpA [Dictyostelium discoideum]
          Length = 1543

 Score = 37.0 bits (84), Expect = 1.0
 Identities = 27/145 (18%), Positives = 59/145 (40%), Gaps = 3/145 (2%)
 Frame = +1

Query: 367 EDTVPLRNVTPSQNAAVRPE-RAVNSPSSQRLSCALTISTSVLMGEDVEGSPIEQEHSRV 543
           +D   + ++   QN+ + P     N+     ++   T +T+ +   +   S      +  
Sbjct: 15  DDLFKVHDLKSFQNSTITPNLNTTNTKLKNTITTTTTTTTTTINNCNNSNSSSSNSSNNS 74

Query: 544 VSSLYSSLANRGNDESKNGTPPRPTSIE-PNETTEHSFFSYH-YDDTLEPDVEEAVRLTK 717
           VSS  S+  N  N+ +KN     P  +  P     H+   +H +++    +    +    
Sbjct: 75  VSSSCSNNNNNNNNNNKNKCKNSPLVVSIPTTIINHNIHHHHLFNNINNNNNNNNINNNN 134

Query: 718 NKTSNVNFISSTGSKGEGETEDEVI 792
           N  SN++  S++ S G G +   ++
Sbjct: 135 NNNSNISSNSNSNSNGGGSSYSNLV 159


>gi|11358102|pir||T48477 hypothetical protein T1E3.170 - Arabidopsis thaliana  (fragment)
 gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
          Length = 880

 Score = 35.4 bits (80), Expect = 3.0
 Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 8/156 (5%)
 Frame = +1

Query: 418 RPERAVNSPSSQRLSCALTISTSVLMGEDVEG-------SPIEQ-EHSRVVSSLYSSLAN 573
           RPE+++ S SS      +    + L    ++G       SP+ Q E S  VSS  SSLA+
Sbjct: 54  RPEKSIGSSSSSSSPSPIPSPKTPLKINPLKGLTNRSSVSPLVQSEVSSKVSSFGSSLAS 113

Query: 574 RGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVEEAVRLTKNKTSNVNFISST 753
           +    SK   PP P    P E T   F      DT  P+ E      + +     F+ + 
Sbjct: 114 KLRLSSKLSPPPPPPPPPPVEETT-QFRDEFRSDTKPPEEETRNPQQEFRQEGKIFVGNL 172

Query: 754 GSKGEGETEDEVIDQYEPVNESKFIPHKLKIPEKAG 861
            +  +    +E   Q+ P+     I    ++ + AG
Sbjct: 173 PTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAG 208


>gi|790602|gb|AAA85852.1| UNC-44
          Length = 985

 Score = 35.4 bits (80), Expect = 3.0
 Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 7/134 (5%)
 Frame = +1

Query: 298  HDTQDNNIPSNTTVRPT-----SLRRDNED-TVPLRNVTPSQNAAVRPERAVNSPSSQRL 459
            HD++D  +    T+  T     ++  +  D TVPL      +   +      +SPS  + 
Sbjct: 854  HDSEDGPVVEERTITTTYEDDVAVNENIVDRTVPLNEDEQQKWEELNRLADESSPSPAQR 913

Query: 460  SCALTISTSVLMGEDVEGSPIEQEHSRVVSSLYSSLANRGN-DESKNGTPPRPTSIEPNE 636
            S  +  STS  + EDVE S   + H     ++ ++     +  ES +G+P R  S+EP E
Sbjct: 914  STIVAESTSEQVPEDVEQSVESESHREDDGTIVTTTVTTSHISESPSGSPTR-RSVEPEE 972

Query: 637  TTEHSFFSYHYDDT 678
               HS    H   T
Sbjct: 973  -HRHSQHEDHEGST 985


>gi|17542696|ref|NP_500900.1| UNCoordinated locomotion UNC-44, Ankyrin repeat and ZU5 domain and
            Death domain containing protein family member (199.0 kD)
            (unc-44) [Caenorhabditis elegans]
 gi|1208875|gb|AAA93445.1| Uncoordinated protein 44, isoform d [Caenorhabditis elegans]
 gi|1814195|gb|AAB41826.1| AO49 ankyrin [Caenorhabditis elegans]
          Length = 1815

 Score = 35.4 bits (80), Expect = 3.0
 Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 7/134 (5%)
 Frame = +1

Query: 298  HDTQDNNIPSNTTVRPT-----SLRRDNED-TVPLRNVTPSQNAAVRPERAVNSPSSQRL 459
            HD++D  +    T+  T     ++  +  D TVPL      +   +      +SPS  + 
Sbjct: 1684 HDSEDGPVVEERTITTTYEDDVAVNENIVDRTVPLNEDEQQKWEELNRLADESSPSPAQR 1743

Query: 460  SCALTISTSVLMGEDVEGSPIEQEHSRVVSSLYSSLANRGN-DESKNGTPPRPTSIEPNE 636
            S  +  STS  + EDVE S   + H     ++ ++     +  ES +G+P R  S+EP E
Sbjct: 1744 STIVAESTSEQVPEDVEQSVESESHREDDGTIVTTTVTTSHISESPSGSPTR-RSVEPEE 1802

Query: 637  TTEHSFFSYHYDDT 678
               HS    H   T
Sbjct: 1803 -HRHSQHEDHEGST 1815


>gi|17542694|ref|NP_500901.1| UNCoordinated locomotion UNC-44, Unc-44 protein family member (198.2
            kD) (unc-44) [Caenorhabditis elegans]
 gi|1208876|gb|AAA93446.1| Uncoordinated protein 44, isoform b [Caenorhabditis elegans]
          Length = 1809

 Score = 35.4 bits (80), Expect = 3.0
 Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 7/134 (5%)
 Frame = +1

Query: 298  HDTQDNNIPSNTTVRPT-----SLRRDNED-TVPLRNVTPSQNAAVRPERAVNSPSSQRL 459
            HD++D  +    T+  T     ++  +  D TVPL      +   +      +SPS  + 
Sbjct: 1678 HDSEDGPVVEERTITTTYEDDVAVNENIVDRTVPLNEDEQQKWEELNRLADESSPSPAQR 1737

Query: 460  SCALTISTSVLMGEDVEGSPIEQEHSRVVSSLYSSLANRGN-DESKNGTPPRPTSIEPNE 636
            S  +  STS  + EDVE S   + H     ++ ++     +  ES +G+P R  S+EP E
Sbjct: 1738 STIVAESTSEQVPEDVEQSVESESHREDDGTIVTTTVTTSHISESPSGSPTR-RSVEPEE 1796

Query: 637  TTEHSFFSYHYDDT 678
               HS    H   T
Sbjct: 1797 -HRHSQHEDHEGST 1809


>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
           thaliana]
          Length = 949

 Score = 35.4 bits (80), Expect = 3.0
 Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 8/156 (5%)
 Frame = +1

Query: 418 RPERAVNSPSSQRLSCALTISTSVLMGEDVEG-------SPIEQ-EHSRVVSSLYSSLAN 573
           RPE+++ S SS      +    + L    ++G       SP+ Q E S  VSS  SSLA+
Sbjct: 54  RPEKSIGSSSSSSSPSPIPSPKTPLKINPLKGLTNRSSVSPLVQSEVSSKVSSFGSSLAS 113

Query: 574 RGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVEEAVRLTKNKTSNVNFISST 753
           +    SK   PP P    P E T   F      DT  P+ E      + +     F+ + 
Sbjct: 114 KLRLSSKLSPPPPPPPPPPVEETT-QFRDEFRSDTKPPEEETRNPQQEFRQEGKIFVGNL 172

Query: 754 GSKGEGETEDEVIDQYEPVNESKFIPHKLKIPEKAG 861
            +  +    +E   Q+ P+     I    ++ + AG
Sbjct: 173 PTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAG 208


>gi|14715476|dbj|BAB62042.1| Endo-beta-N-acetylglucosaminidase D [Streptococcus pneumoniae]
          Length = 1646

 Score = 35.0 bits (79), Expect = 3.9
 Identities = 39/165 (23%), Positives = 62/165 (37%), Gaps = 9/165 (5%)
 Frame = +1

Query: 1081 LEEEGPPIGLPSIPVLRSVSGPSKWTKTPLRLESGNSTKSDPFSRYEGHKTPSXXXXXXX 1260
            L+E+G  + L    +++      K  K    L  G       F + + H   +       
Sbjct: 1415 LDEKGQDVDLSYASIVKIPIEKDKKVKKVFFLPEGKEAVELAFEQTDSHVIFTAPHFTHY 1474

Query: 1261 XXXXXXXEHGQPLVLAPIKSQSSESDTGQNSIIEKPA---RSIRRK------QQEKTDNR 1413
                   E  QP   AP           QN ++ KP     S ++K      Q+EK    
Sbjct: 1475 AFVYESAEKPQPAKPAP-----------QNKVLPKPTYQPASDQQKAPKLEVQEEKVAFH 1523

Query: 1414 KEDRHDAENIDLEARMPIQHIDTASIHSFDSGQNGFRDVYSIENI 1548
            +++  +AE +  E R+ IQ  D    H F+  +NG R + S E I
Sbjct: 1524 RQEHENAEMLVGEQRVIIQGRDGLLRHVFEVDENGQRRLRSTEVI 1568


>gi|23027628|ref|ZP_00066066.1| hypothetical protein [Microbulbifer degradans 2-40]
          Length = 187

 Score = 35.0 bits (79), Expect = 3.9
 Identities = 23/67 (34%), Positives = 36/67 (53%)
 Frame = +1

Query: 367 EDTVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTISTSVLMGEDVEGSPIEQEHSRVV 546
           +D  PLR  TP++N+A   ++A   PSSQ          + ++G+DV G  +   HS+ V
Sbjct: 65  QDIRPLRRKTPNKNSAFVIKKAYLQPSSQ---------VAAILGKDVIG--VNSLHSQAV 113

Query: 547 SSLYSSL 567
           + L S L
Sbjct: 114 NKLSSEL 120


>gi|172526|gb|AAA35015.1| S1 protein
          Length = 570

 Score = 35.0 bits (79), Expect = 3.9
 Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 3/161 (1%)
 Frame = +1

Query: 304 TQDNNIPSNTTVRPTSLRRDNEDTVPLRNVTPSQNAAV-RPERAVNSPSSQRLSCALTIS 480
           T+ +  P  T    +++      + P  + T S +  V  P  +    SS  +S + T S
Sbjct: 41  TESSVAPVPTPSSSSNITSSAPSSTPFSSSTESSSVPVPTPSSSTTESSSAPVSSSTTES 100

Query: 481 TSVLMGEDVEGSPIEQEHSRVVSSLYSSLANRGNDES-KNGTPPRPTSIE-PNETTEHSF 654
           +       V   P     S + SS  SS+      ES   GT   P+S + P   TE S 
Sbjct: 101 S-------VAPVPTPSSSSNITSSAPSSIPFSSTTESFSTGTTVTPSSSKYPGSQTETSV 153

Query: 655 FSYHYDDTLEPDVEEAVRLTKNKTSNVNFISSTGSKGEGET 777
            S   + T+ P        T + T+    + STG+   GET
Sbjct: 154 SSTT-ETTIVPTKTTTSVTTPSTTTITTTVCSTGTNSAGET 193


>gi|6322209|ref|NP_012284.1| Required for invasion and pseudohyphae formation in response to
            nitrogen starvation; Muc1p [Saccharomyces cerevisiae]
 gi|728850|sp|P08640|AMYH_YEAST Glucoamylase S1/S2 precursor (Glucan 1,4-alpha-glucosidase)
            (1,4-alpha-D-glucan glucohydrolase)
 gi|626156|pir||S48478 glucan 1,4-alpha-glucosidase (EC 3.2.1.3) - yeast  (Saccharomyces
            cerevisiae)
 gi|557822|emb|CAA86176.1| mal5, sta1, len: 1367, CAI: 0.3, AMYH_YEAST P08640 GLUCOAMYLASE S1
            (EC 3.2.1.3) [Saccharomyces cerevisiae]
 gi|1304387|gb|AAC49609.1| glucoamylase [Saccharomyces cerevisiae var. diastaticus]
          Length = 1367

 Score = 35.0 bits (79), Expect = 3.9
 Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 3/161 (1%)
 Frame = +1

Query: 304  TQDNNIPSNTTVRPTSLRRDNEDTVPLRNVTPSQNAAV-RPERAVNSPSSQRLSCALTIS 480
            T+ +  P  T    +++      + P  + T S +  V  P  +    SS  +S + T S
Sbjct: 802  TESSVAPVPTPSSSSNITSSAPSSTPFSSSTESSSVPVPTPSSSTTESSSAPVSSSTTES 861

Query: 481  TSVLMGEDVEGSPIEQEHSRVVSSLYSSLANRGNDES-KNGTPPRPTSIE-PNETTEHSF 654
            +       V   P     S + SS  SS+      ES   GT   P+S + P   TE S 
Sbjct: 862  S-------VAPVPTPSSSSNITSSAPSSIPFSSTTESFSTGTTVTPSSSKYPGSQTETSV 914

Query: 655  FSYHYDDTLEPDVEEAVRLTKNKTSNVNFISSTGSKGEGET 777
             S   + T+ P        T + T+    + STG+   GET
Sbjct: 915  SSTT-ETTIVPTKTTTSVTTPSTTTITTTVCSTGTNSAGET 954


>gi|21902026|dbj|BAC05576.1| B1097D05.27 [Oryza sativa (japonica cultivar-group)]
          Length = 309

 Score = 35.0 bits (79), Expect = 3.9
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
 Frame = +1

Query: 499 EDVEGSPIEQEHSRVVSSLYSSLANRG--NDESKNGTPPRPTSIEPNETTEHSFFSYHYD 672
           ++  G+P+ +  S  V++  S+   RG  ND +K       TS EP+ T   +  S +  
Sbjct: 165 KETVGAPVTE--SAQVNNERSTENERGVDNDAAKRKRANDTTSEEPDNTKRQNNLSVNSG 222

Query: 673 DTLEPDVEEAVRLTKNKTSNVNFISSTGSKGEG 771
           + ++   EEA    K+K +    +SS   KG G
Sbjct: 223 EVVQSSNEEAETKAKSKGTKDELVSSANLKGNG 255


>gi|23490214|gb|EAA22044.1| ERYTHROCYTE MEMBRANE PROTEIN PFEMP3 [Plasmodium yoelii yoelii]
          Length = 981

 Score = 34.7 bits (78), Expect = 5.2
 Identities = 37/158 (23%), Positives = 67/158 (42%)
 Frame = +1

Query: 364  NEDTVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTISTSVLMGEDVEGSPIEQEHSRV 543
            N++T    N     N+  +     N+PS  ++   L  + +    +++        ++  
Sbjct: 589  NKNTTNENNNVNQNNSITKNSSLFNNPSPLKIETYLVNNENKSAPKNISN----MHNNAP 644

Query: 544  VSSLYSSLANRGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVEEAVRLTKNK 723
            +SS   S+    ND   N  P +   I+ N +TE+ F +   +   EPD+ E      N+
Sbjct: 645  ISS--DSVKIHKNDSIFNQDPYQ---IKNNASTENQFKNLSVEK--EPDINE-----NNE 692

Query: 724  TSNVNFISSTGSKGEGETEDEVIDQYEPVNESKFIPHK 837
            TS+V      GS+ EGET++      + +    F P K
Sbjct: 693  TSSVTLNKEPGSELEGETKNVRKSFLKQIFSRSFSPFK 730


>gi|25395700|pir||H88444 protein C26E6.12 [imported] - Caenorhabditis elegans
          Length = 1802

 Score = 34.7 bits (78), Expect = 5.2
 Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 3/166 (1%)
 Frame = +1

Query: 373  TVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTISTSVLMGEDVEGSPIEQEHSRVVSS 552
            T  L N    + A+       +SP  QR      +S+S         S ++QE +    S
Sbjct: 1223 TSVLSNDKRRRRASFSSTSIQSSPERQR-----DVSSSSRTSSSSSTSSMKQEETADEKS 1277

Query: 553  LYSSLANRGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVEEAVRLTKNKTSN 732
                L    ++ S  G+    TS+  +  +           +LEP  E+       K S 
Sbjct: 1278 RKRKLIMSSDESSTTGSTA--TSVVSSRQS-----------SLEPQQEKTDGEPPKKKSQ 1324

Query: 733  VNFISSTGSKGEGETE--DEVIDQYEP-VNESKFIPHKLKIPEKAG 861
             +FIS   SK EGE     E ++   P + +S ++P+K+   EKAG
Sbjct: 1325 TDFISERVSKIEGEERPLPEPVETSGPIIGDSSYLPYKIVHWEKAG 1370


>gi|27676018|ref|XP_222568.1| similar to KIAA0622 protein - human (fragment) [Rattus norvegicus]
          Length = 1291

 Score = 34.7 bits (78), Expect = 5.2
 Identities = 44/189 (23%), Positives = 80/189 (42%), Gaps = 2/189 (1%)
 Frame = +1

Query: 385  RNVTPSQNAAVRPERAVNSPSSQRLSCALTISTSVLMGEDVEGSPIEQEHSRVVSSLYSS 564
            R+ + SQ +  RP  A  SP+    S   T+ST  +      GS +++  S +  +  +S
Sbjct: 589  RSSSSSQESLNRPLSAKRSPTGSTASRGSTVSTKSM---STTGS-LQRSRSDIDVNAAAS 644

Query: 565  LANRGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVEEA--VRLTKNKTSNVN 738
              ++ +  S +       ++ P      S  S H  + LE    +A  +R  +  + +  
Sbjct: 645  AKSKVSSSSGSTAFSSAAALPPGSYA--SLESRHMREDLEYVGLDAGRIRTRRQSSGSTT 702

Query: 739  FISSTGSKGEGETEDEVIDQYEPVNESKFIPHKLKIPEKAGXXXXXXXXXXXXPGAPGTS 918
             ++ST S   G +  +V+ Q +P + S   P KL     +G            P  P +S
Sbjct: 703  NVASTSSDSRGRSRAKVVSQSQPGSRSS-SPGKLL---GSGYGGLAGGSSRGPPVTP-SS 757

Query: 919  ARKIKIPQS 945
             ++ KIP+S
Sbjct: 758  EKRSKIPRS 766


>gi|23612359|ref|NP_703939.1| P. falciparum PK4 protein kinase [Plasmodium falciparum 3D7]
 gi|23498600|emb|CAD50552.1| P. falciparum PK4 protein kinase [Plasmodium falciparum 3D7]
          Length = 3072

 Score = 34.7 bits (78), Expect = 5.2
 Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
 Frame = +1

Query: 571  NRGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVEEAVRLTKNKTSNVNFISS 750
            N  ND +KN       +   N    +S++ Y+ +     D+   +  +KN+  N  +I+ 
Sbjct: 984  NNKNDNNKNDNNKNDNNNNNNNNNNNSYYYYNINGNASDDI---LVHSKNELLNNTYINK 1040

Query: 751  TGSKGEGETEDE-VIDQYEPVNESKFIPHK 837
            T  K E    +E  +++ + +N  K +P +
Sbjct: 1041 TNIKDENSNNNESFLNKIDGMNNFKLLPKR 1070


>gi|17552318|ref|NP_498040.1| SET (trithorax/polycomb) domain containing SET-2 (171.7 kD) (set-2)
            [Caenorhabditis elegans]
 gi|14550341|gb|AAK67214.1|U13875_13 Hypothetical protein C26E6.9a [Caenorhabditis elegans]
          Length = 1507

 Score = 34.7 bits (78), Expect = 5.2
 Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 3/166 (1%)
 Frame = +1

Query: 373  TVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTISTSVLMGEDVEGSPIEQEHSRVVSS 552
            T  L N    + A+       +SP  QR      +S+S         S ++QE +    S
Sbjct: 928  TSVLSNDKRRRRASFSSTSIQSSPERQR-----DVSSSSRTSSSSSTSSMKQEETADEKS 982

Query: 553  LYSSLANRGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVEEAVRLTKNKTSN 732
                L    ++ S  G+    TS+  +  +           +LEP  E+       K S 
Sbjct: 983  RKRKLIMSSDESSTTGSTA--TSVVSSRQS-----------SLEPQQEKTDGEPPKKKSQ 1029

Query: 733  VNFISSTGSKGEGETE--DEVIDQYEP-VNESKFIPHKLKIPEKAG 861
             +FIS   SK EGE     E ++   P + +S ++P+K+   EKAG
Sbjct: 1030 TDFISERVSKIEGEERPLPEPVETSGPIIGDSSYLPYKIVHWEKAG 1075


>gi|17552316|ref|NP_498041.1| SET (trithorax/polycomb) domain containing SET-2 (84.0 kD) (set-2)
           [Caenorhabditis elegans]
 gi|25395701|pir||A88445 protein C26E6.10 [imported] - Caenorhabditis elegans
 gi|532810|gb|AAA21163.1| Hypothetical protein C26E6.9b [Caenorhabditis elegans]
          Length = 739

 Score = 34.7 bits (78), Expect = 5.2
 Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 3/166 (1%)
 Frame = +1

Query: 373 TVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTISTSVLMGEDVEGSPIEQEHSRVVSS 552
           T  L N    + A+       +SP  QR      +S+S         S ++QE +    S
Sbjct: 160 TSVLSNDKRRRRASFSSTSIQSSPERQR-----DVSSSSRTSSSSSTSSMKQEETADEKS 214

Query: 553 LYSSLANRGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVEEAVRLTKNKTSN 732
               L    ++ S  G+    TS+  +  +           +LEP  E+       K S 
Sbjct: 215 RKRKLIMSSDESSTTGSTA--TSVVSSRQS-----------SLEPQQEKTDGEPPKKKSQ 261

Query: 733 VNFISSTGSKGEGETE--DEVIDQYEP-VNESKFIPHKLKIPEKAG 861
            +FIS   SK EGE     E ++   P + +S ++P+K+   EKAG
Sbjct: 262 TDFISERVSKIEGEERPLPEPVETSGPIIGDSSYLPYKIVHWEKAG 307


>gi|17552320|ref|NP_498039.1| SET (trithorax/polycomb) domain containing SET-2 (172.0 kD) (set-2)
            [Caenorhabditis elegans]
 gi|14550342|gb|AAK67215.1|U13875_14 Hypothetical protein C26E6.9c [Caenorhabditis elegans]
          Length = 1510

 Score = 34.7 bits (78), Expect = 5.2
 Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 3/166 (1%)
 Frame = +1

Query: 373  TVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTISTSVLMGEDVEGSPIEQEHSRVVSS 552
            T  L N    + A+       +SP  QR      +S+S         S ++QE +    S
Sbjct: 931  TSVLSNDKRRRRASFSSTSIQSSPERQR-----DVSSSSRTSSSSSTSSMKQEETADEKS 985

Query: 553  LYSSLANRGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVEEAVRLTKNKTSN 732
                L    ++ S  G+    TS+  +  +           +LEP  E+       K S 
Sbjct: 986  RKRKLIMSSDESSTTGSTA--TSVVSSRQS-----------SLEPQQEKTDGEPPKKKSQ 1032

Query: 733  VNFISSTGSKGEGETE--DEVIDQYEP-VNESKFIPHKLKIPEKAG 861
             +FIS   SK EGE     E ++   P + +S ++P+K+   EKAG
Sbjct: 1033 TDFISERVSKIEGEERPLPEPVETSGPIIGDSSYLPYKIVHWEKAG 1078


>gi|17509105|ref|NP_492699.1| Protein kinase with conserved C terminal domain [Caenorhabditis
           elegans]
 gi|7508065|pir||T25035 hypothetical protein T20F10.1 - Caenorhabditis elegans
 gi|3879993|emb|CAB04745.1| Hypothetical protein T20F10.1 [Caenorhabditis elegans]
          Length = 908

 Score = 34.3 bits (77), Expect = 6.7
 Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
 Frame = +1

Query: 322 PSNTTVRPTSLRRDNEDTVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTISTSVLMGE 501
           PS+++V  + +  DN + +   N + S + A      V+S +    +   T       G 
Sbjct: 81  PSSSSVSHSDITNDNAEVM---NFSSSSSNAAATTTTVSSAAVSNSNSFRTEGG----GH 133

Query: 502 DVEGSPIEQEHSRVVSSLYSSLANRGNDESKNGTPPRPTSIEPNETTEHSF----FSYHY 669
            +  +P+ Q H  + +    ++   G +  +NG P    S  P+ TTE S       Y Y
Sbjct: 134 KMRITPMPQRHLMMDTGANETVFRSGKEMIRNGNPSTTISSTPSTTTEESIRIHPAGYRY 193

Query: 670 D 672
           D
Sbjct: 194 D 194


>gi|17221118|gb|AAK61486.1| glycoprotein gp2 [Equine herpesvirus 4]
          Length = 726

 Score = 34.3 bits (77), Expect = 6.7
 Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
 Frame = +1

Query: 373 TVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTI---------STSVLMGEDVEGSPIE 525
           T P    TP+Q +    E +V +     ++   T          ST+V    D   +   
Sbjct: 354 TKPPTLFTPTQTSPTPSETSVGTREYLAITYGKTTYTTPTNALSSTNVWPARDNSSTQQT 413

Query: 526 QEHSRVVSS--LYSSL-ANRGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVE 696
            +H  +V++  L   L  ++G    KN       S+ P+  T H+ + Y+YDDT  P   
Sbjct: 414 TQHDYIVTTQKLTGHLHQHKGRANGKNVNNKSHPSVRPDRLTPHTDYHYYYDDTDYPQDG 473

Query: 697 EAVRLT 714
              R+T
Sbjct: 474 SFERVT 479


>gi|23040234|gb|ZP_00071755.1| hypothetical protein [Trichodesmium erythraeum IMS101]
          Length = 902

 Score = 34.3 bits (77), Expect = 6.7
 Identities = 35/166 (21%), Positives = 61/166 (36%), Gaps = 7/166 (4%)
 Frame = +1

Query: 310  DNNIPSNTTVRPTSLRRDNEDTVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTISTSV 489
            + NIP  T V  T+    +++    +N+  +Q         +NSP +Q  +   T +TS 
Sbjct: 607  EKNIPIVTDVTETTPDTKSQEESTSKNLENNQEVI-----PMNSPVTQSTNMTQTTTTST 661

Query: 490  LMGE-------DVEGSPIEQEHSRVVSSLYSSLANRGNDESKNGTPPRPTSIEPNETTEH 648
             + E           +P     +    S  S+L  +    +   TP      E   T E 
Sbjct: 662  TISEAQPLSTHQTPKTPTFSSDTNTTISTPSTLGKQEGQPTVETTPSTSVQQEDKLTVET 721

Query: 649  SFFSYHYDDTLEPDVEEAVRLTKNKTSNVNFISSTGSKGEGETEDE 786
            +        T+EP +       + +T+    I ST  + EG+   E
Sbjct: 722  TSGQQEGQTTVEPTIPSTSGQQEGQTTVEPTIPSTSGQQEGQPTGE 767


>gi|17221120|gb|AAK61487.1| glycoprotein gp2 [Equine herpesvirus 4]
          Length = 703

 Score = 34.3 bits (77), Expect = 6.7
 Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
 Frame = +1

Query: 373 TVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTI---------STSVLMGEDVEGSPIE 525
           T P    TP+Q +    E +V +     ++   T          ST+V    D   +   
Sbjct: 331 TKPPTLFTPTQTSPTPSETSVGTREYLAITYGKTTYTTPTNALSSTNVWPARDNSSTQQT 390

Query: 526 QEHSRVVSS--LYSSL-ANRGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVE 696
            +H  +V++  L   L  ++G    KN       S+ P+  T H+ + Y+YDDT  P   
Sbjct: 391 TQHDYIVTTQKLTGHLHQHKGRANGKNVNNKSHPSVRPDRLTPHTDYHYYYDDTDYPQDG 450

Query: 697 EAVRLT 714
              R+T
Sbjct: 451 SFERVT 456


>gi|17221122|gb|AAK61488.1| glycoprotein gp2 [Equine herpesvirus 4]
          Length = 779

 Score = 34.3 bits (77), Expect = 6.7
 Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
 Frame = +1

Query: 373 TVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTI---------STSVLMGEDVEGSPIE 525
           T P    TP+Q +    E +V +     ++   T          ST+V    D   +   
Sbjct: 331 TKPPTLFTPTQTSPTPSETSVGTREYLAITYGKTTYTTPTNALSSTNVWPARDNSSTQQT 390

Query: 526 QEHSRVVSS--LYSSL-ANRGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVE 696
            +H  +V++  L   L  ++G    KN       S+ P+  T H+ + Y+YDDT  P   
Sbjct: 391 TQHDYIVTTQKLTGHLHQHKGRANGKNVNNKSHPSVRPDRLTPHTDYHYYYDDTDYPQDG 450

Query: 697 EAVRLT 714
              R+T
Sbjct: 451 SFERVT 456


>gi|9629801|ref|NP_045288.1| 71 [Equine herpesvirus 4]
 gi|11278207|pir||T42614 probable envelope protein - equine herpesvirus 4 (strain NS80567)
 gi|2606019|gb|AAC59591.1| 71 [Equine herpesvirus 4]
          Length = 750

 Score = 34.3 bits (77), Expect = 6.7
 Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
 Frame = +1

Query: 373 TVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTI---------STSVLMGEDVEGSPIE 525
           T P    TP+Q +    E +V +     ++   T          ST+V    D   +   
Sbjct: 378 TKPPTLFTPTQTSPTPSETSVGTREYLAITYGKTTYTTPTNALSSTNVWPARDNSSTQQT 437

Query: 526 QEHSRVVSS--LYSSL-ANRGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVE 696
            +H  +V++  L   L  ++G    KN       S+ P+  T H+ + Y+YDDT  P   
Sbjct: 438 TQHDYIVTTQKLTGHLHQHKGRANGKNVNNKSHPSVRPDRLTPHTDYHYYYDDTDYPQDG 497

Query: 697 EAVRLT 714
              R+T
Sbjct: 498 SFERVT 503


>gi|17221126|gb|AAK61490.1| glycoprotein gp2 [Equine herpesvirus 4]
          Length = 825

 Score = 34.3 bits (77), Expect = 6.7
 Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
 Frame = +1

Query: 373 TVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTI---------STSVLMGEDVEGSPIE 525
           T P    TP+Q +    E +V +     ++   T          ST+V    D   +   
Sbjct: 377 TKPPTLFTPTQTSPTPSETSVGTREYLAITYGKTTYTTPTNALSSTNVWPARDNSSTQQT 436

Query: 526 QEHSRVVSS--LYSSL-ANRGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVE 696
            +H  +V++  L   L  ++G    KN       S+ P+  T H+ + Y+YDDT  P   
Sbjct: 437 TQHDYIVTTQKLTGHLHQHKGRANGKNVNNKSHPSVRPDRLTPHTDYHYYYDDTDYPQDG 496

Query: 697 EAVRLT 714
              R+T
Sbjct: 497 SFERVT 502


>gi|17221124|gb|AAK61489.1| glycoprotein gp2 [Equine herpesvirus 4]
          Length = 804

 Score = 34.3 bits (77), Expect = 6.7
 Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
 Frame = +1

Query: 373 TVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTI---------STSVLMGEDVEGSPIE 525
           T P    TP+Q +    E +V +     ++   T          ST+V    D   +   
Sbjct: 356 TKPPTLFTPTQTSPTPSETSVGTREYLAITYGKTTYTTPTNALSSTNVWPARDNSSTQQT 415

Query: 526 QEHSRVVSS--LYSSL-ANRGNDESKNGTPPRPTSIEPNETTEHSFFSYHYDDTLEPDVE 696
            +H  +V++  L   L  ++G    KN       S+ P+  T H+ + Y+YDDT  P   
Sbjct: 416 TQHDYIVTTQKLTGHLHQHKGRANGKNVNNKSHPSVRPDRLTPHTDYHYYYDDTDYPQDG 475

Query: 697 EAVRLT 714
              R+T
Sbjct: 476 SFERVT 481


>gi|23488355|gb|EAA21287.1| Regulator of chromosome condensation, putative [Plasmodium yoelii
           yoelii]
          Length = 665

 Score = 33.9 bits (76), Expect = 8.8
 Identities = 53/215 (24%), Positives = 78/215 (36%), Gaps = 6/215 (2%)
 Frame = +1

Query: 127 GAHGNPDAETEMATVAYETTSRGQGFAVYINNERFSQIMGAXXXXXXXXXXXXITQFHDT 306
           G  GN   E     V  +       F  Y N E F   M              IT F   
Sbjct: 400 GTGGNEFDENSSIGVIEQNKPSEINFIKYFNKEIFKNNMN---NSDLLINQIKITSFSGG 456

Query: 307 QDNN--IPSNTTVRPTSLRRDNEDTVPLRNVTPSQNAAVRPERAVNSPSSQRLSCALTIS 480
             +   I S+T     SL+R ++++         Q    + E+ +NS             
Sbjct: 457 SSHCALISSHTFSEKVSLKRGHDESYNEDIYMKKQ----KMEKIMNSSGKN--------- 503

Query: 481 TSVLMGEDVEGSPIEQ----EHSRVVSSLYSSLANRGNDESKNGTPPRPTSIEPNETTEH 648
             ++M ED     I+Q    +      S Y S     N +SK         I+ NET+++
Sbjct: 504 -DIIMNEDDNKINIDQTEDIKKKSFFGSFYFSSTKSNNKDSKLSKDE--FEIDKNETSQN 560

Query: 649 SFFSYHYDDTLEPDVEEAVRLTKNKTSNVNFISST 753
              +  YD TL+ DV +  + TKNK S VN  + T
Sbjct: 561 D--TNQYDTTLDEDVTKKRKSTKNK-SYVNIENPT 592


>gi|15900412|ref|NP_345016.1| endo-beta-N-acetylglucosaminidase, putative [Streptococcus pneumoniae
            TIGR4]
 gi|25379642|pir||G95057 endo-beta-N-acetylglucosaminidase, probable [imported] -
            Streptococcus pneumoniae (strain TIGR4)
 gi|14971970|gb|AAK74656.1| endo-beta-N-acetylglucosaminidase, putative [Streptococcus pneumoniae
            TIGR4]
          Length = 1659

 Score = 33.9 bits (76), Expect = 8.8
 Identities = 38/165 (23%), Positives = 62/165 (37%), Gaps = 9/165 (5%)
 Frame = +1

Query: 1081 LEEEGPPIGLPSIPVLRSVSGPSKWTKTPLRLESGNSTKSDPFSRYEGHKTPSXXXXXXX 1260
            L+E+G  + L    +++      K  K    L  G       F + + H   +       
Sbjct: 1428 LDEKGQDVDLSYASIVKIPIEKDKKVKKVFFLPEGKEAVELAFEQTDSHVIFTAPHFTHY 1487

Query: 1261 XXXXXXXEHGQPLVLAPIKSQSSESDTGQNSIIEKPA---RSIRRK------QQEKTDNR 1413
                   E  QP   AP           QN+++ KP     S ++K      Q+EK    
Sbjct: 1488 AFVYESAEKPQPAKPAP-----------QNTVLPKPTYQPTSDQQKAPKLEVQEEKVAFH 1536

Query: 1414 KEDRHDAENIDLEARMPIQHIDTASIHSFDSGQNGFRDVYSIENI 1548
            +++  + E +  E R+ IQ  D    H F+  +NG R + S E I
Sbjct: 1537 RQEHENTEMLVGEQRVIIQGRDGLLRHVFEVDENGQRRLRSTEVI 1581


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 19, 2003 11:08 PM
  Number of letters in database: 441,946,756
  Number of sequences in database:  1,375,764
  
Lambda     K      H
   0.314    0.132    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,347,647,119
Number of Sequences: 1375764
Number of extensions: 28104410
Number of successful extensions: 55193
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 51392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54876
length of database: 441,946,756
effective HSP length: 129
effective length of database: 264,473,200
effective search space used: 125360296800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)