MedBlast Result

MedBlast(0.8) Results
Direct References
Indirect References
Options
BLASTN
BLASTX
Direct References:
Hit	Evalue	SeqType	References
Z72770	0.0	N
X94357	0.0	N	Yeast 1996 Dec;12(15):1555-62
M17781	0.0	N	Yeast 1996 Dec;12(15):1555-62 Mol Cell Biol 1987 Oct;7(10):3629-36
NP_011266	0.0	P
P22434	0.0	P
ESBYPC	0.0	P
CAA64139	0.0	P
CAA96968	0.0	P
AAA34896	0.0	P
NP_588337	5e-25	P
P36599	5e-25	P
S22442	5e-25	P
AAB20315	5e-25	P
CAA20848	5e-25	P
1814444A	5e-25	P
References Summary:
Coissac E, Maillier E, Robineau S, Netter P
Sequence of a 39,411 bp DNA fragment covering the left end of chromosome VII of Saccharomyces cerevisiae.
Yeast 1996 Dec;12(15):1555-62
PMID: 8972578
Nikawa J, Sass P, Wigler M
Cloning and characterization of the low-affinity cyclic AMP phosphodiesterase gene of Saccharomyces cerevisiae.
Mol Cell Biol 1987 Oct;7(10):3629-36
PMID: 2824992
Indirect References:
Hit	Evalue	SeqType	References
Z72770	0.0	N	pde1 FEBS Lett 1997 Dec 29;420(2-3):147-50 Genetics 1993 Oct;135(2):321-6 Nucleic Acids Res 1994 Dec 11;22(24):5296-301 Mol Gen Genet 1995 Nov 27;249(3):257-64 J Biol Chem 1993 Jun 15;268(17):12925-32 Microbiology 1994 Jul;140 ( Pt 7):1533-42 Yeast 1996 Dec;12(15):1555-62 Gene 1993 Jul 15;129(1):147-52 Cell Signal 1997 Nov;9(7):519-29 Biochemistry 1997 May 20;36(20):6100-6 Mol Gen Genet 1992 May;233(1-2):17-24 Proc Natl Acad Sci U S A 1991 Apr 1;88(7):2913-7 Biochem Biophys Res Commun 1993 Jul 15;194(1):79-82 Mol Microbiol 1999 Sep;33(5):904-18 J Bacteriol 1993 Aug;175(15):4615-24 Mol Cell Biol 1987 Oct;7(10):3629-36 J Biol Chem 1983 Mar 25;258(6):3539-42 Mol Biol Cell 1999 Jan;10(1):91-104 Plant Cell 2001 Sep;13(9):1987-2004 pde1p (-)
X94357	0.0	N	pde1 (...) pde1p (-)
M17781	0.0	N
NP_011266	0.0	P	pde1 (...) pde1p (-)
P22434	0.0	P
ESBYPC	0.0	P
CAA64139	0.0	P	pde1 (...) pde1p (-)
CAA96968	0.0	P	pde1 (...) pde1p (-)
AAA34896	0.0	P
NP_588337	5e-25	P	cgs2 EMBO J 1991 Dec;10(12):3759-68 Biochem Biophys Res Commun 1993 Jul 15;194(1):79-82 Mol Cell Biol 2000 Nov;20(21):7955-70 Mol Cell Biol 1995 Mar;15(3):1479-88
P36599	5e-25	P
S22442	5e-25	P
AAB20315	5e-25	P
CAA20848	5e-25	P
1814444A	5e-25	P
References Summary:
Wera S, Ma P, Thevelein JM
Glucose exerts opposite effects on mRNA versus protein and activity levels of Pde1, the low-affinity cAMP phosphodiesterase from budding yeast, Saccharomyces cerevisiae.
FEBS Lett 1997 Dec 29;420(2-3):147-50
PMID: 9459299
Mitsuzawa H
Responsiveness to exogenous cAMP of a Saccharomyces cerevisiae strain conferred by naturally occurring alleles of PDE1 and PDE2.
Genetics 1993 Oct;135(2):321-6
PMID: 8243997
Kuromori T, Yamamoto M
Cloning of cDNAs from Arabidopsis thaliana that encode putative protein phosphatase 2C and a human Dr1-like protein by transformation of a fission yeast mutant.
Nucleic Acids Res 1994 Dec 11;22(24):5296-301
PMID: 7816619
Hirata D, Harada S, Namba H, Miyakawa T
Adaptation to high-salt stress in Saccharomyces cerevisiae is regulated by Ca2+/calmodulin-dependent phosphoprotein phosphatase (calcineurin) and cAMP-dependent protein kinase.
Mol Gen Genet 1995 Nov 27;249(3):257-64
PMID: 7500949
Michaeli T, Bloom TJ, Martins T, Loughney K, Ferguson K, Riggs M, Rodgers L, Beavo JA, Wigler M
Isolation and characterization of a previously undetected human cAMP phosphodiesterase by complementation of cAMP phosphodiesterase-deficient Saccharomyces cerevisiae.
J Biol Chem 1993 Jun 15;268(17):12925-32
PMID: 8389765
Hoyer LL, Cieslinski LB, McLaughlin MM, Torphy TJ, Shatzman AR, Livi GP
A Candida albicans cyclic nucleotide phosphodiesterase: cloning and expression in Saccharomyces cerevisiae and biochemical characterization of the recombinant enzyme.
Microbiology 1994 Jul;140 ( Pt 7):1533-42
PMID: 8075796
Matviw H, Yu G, Young D
Identification and genetic analysis of Schizosaccharomyces pombe cDNAs that suppress deletion of IRA1 in Saccharomyces cerevisiae.
Gene 1993 Jul 15;129(1):147-52
PMID: 8335253
Yu J, Wolda SL, Frazier AL, Florio VA, Martins TJ, Snyder PB, Harris EA, McCaw KN, Farrell CA, Steiner B, Bentley JK, Beavo JA, Ferguson K, Gelinas R
Identification and characterisation of a human calmodulin-stimulated phosphodiesterase PDE1B1.
Cell Signal 1997 Nov;9(7):519-29
PMID: 9419816
Sander M, Ramotar D
Partial purification of Pde1 from Saccharomyces cerevisiae: enzymatic redundancy for the repair of 3'-terminal DNA lesions and abasic sites in yeast.
Biochemistry 1997 May 20;36(20):6100-6
PMID: 9166780
Mochizuki N, Yamamoto M
Reduction in the intracellular cAMP level triggers initiation of sexual development in fission yeast.
Mol Gen Genet 1992 May;233(1-2):17-24
PMID: 1318497
Colicelli J, Nicolette C, Birchmeier C, Rodgers L, Riggs M, Wigler M
Expression of three mammalian cDNAs that interfere with RAS function in Saccharomyces cerevisiae.
Proc Natl Acad Sci U S A 1991 Apr 1;88(7):2913-7
PMID: 1849280
Matviw H, Li J, Young D
The Schizosaccharomyces pombe pde1/cgs2 gene encodes a cyclic AMP phosphodiesterase.
Biochem Biophys Res Commun 1993 Jul 15;194(1):79-82
PMID: 8392846
Thevelein JM, de Winde JH
Novel sensing mechanisms and targets for the cAMP-protein kinase A pathway in the yeast Saccharomyces cerevisiae.
Mol Microbiol 1999 Sep;33(5):904-18
PMID: 10476026
Dunlap PV, Callahan SM
Characterization of a periplasmic 3':5'-cyclic nucleotide phosphodiesterase gene, cpdP, from the marine symbiotic bacterium Vibrio fischeri.
J Bacteriol 1993 Aug;175(15):4615-24
PMID: 8393003
Uno I, Matsumoto K, Ishikawa T
Characterization of a cyclic nucleotide phosphodiesterase-deficient mutant in yeast.
J Biol Chem 1983 Mar 25;258(6):3539-42
PMID: 6300049
Ma P, Wera S, Van Dijck P, Thevelein JM
The PDE1-encoded low-affinity phosphodiesterase in the yeast Saccharomyces cerevisiae has a specific function in controlling agonist-induced cAMP signaling.
Mol Biol Cell 1999 Jan;10(1):91-104
PMID: 9880329
Balhadere PV, Talbot NJ
PDE1 encodes a P-type ATPase involved in appressorium-mediated plant infection by the rice blast fungus Magnaporthe grisea.
Plant Cell 2001 Sep;13(9):1987-2004
PMID: 11549759
DeVoti J, Seydoux G, Beach D, McLeod M
Interaction between ran1+ protein kinase and cAMP dependent protein kinase as negative regulators of fission yeast meiosis.
EMBO J 1991 Dec;10(12):3759-68
PMID: 1657594
Romfo CM, Alvarez CJ, van Heeckeren WJ, Webb CJ, Wise JA
Evidence for splice site pairing via intron definition in Schizosaccharomyces pombe.
Mol Cell Biol 2000 Nov;20(21):7955-70
PMID: 11027266
Wu SY, McLeod M
The sak1+ gene of Schizosaccharomyces pombe encodes an RFX family DNA-binding protein that positively regulates cyclic AMP-dependent protein kinase-mediated exit from the mitotic cell cycle.
Mol Cell Biol 1995 Mar;15(3):1479-88
PMID: 7862141
Options:
Limit of E-value: 1e-20
Limit of Length: 100000
Limit of references returned each search: 40
Limit of retry times: 3
Direct references: Yes
Indirect references: Yes
Allow symbol with hyphen: Yes
Use stop word list: Yes
Thesaurus:
- Saccharomyces cerevisiae (Version: 20021123.0)



 
BLASTN 2.2.5 [Nov-16-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
RID: 1048224150-028961-2724
Query= 
         (1110 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences) 
           1,706,607 sequences; 7,920,131,457 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|1322920|emb|Z72770.1|SCYGL248W S.cerevisiae chromosome VII re...  2200   0.0  
gi|1150575|emb|X94357.1|SCHRVIILT S.cerevisiae left telomeric re...  2200   0.0  
gi|172228|gb|M17781.1|YSCPPR S.cerevisiae low-affinity cAMP phos...  2192   0.0  
gi|22832035|gb|AE003451.3| Drosophila melanogaster chromosome X ...    50   0.007
gi|27369428|gb|AC125291.3| Drosophila melanogaster X BAC CH221-1...    50   0.007
gi|21328490|gb|AC023709.4| Drosophila melanogaster X BAC RP98-10...    50   0.007
gi|15799528|gb|AC087310.9| Homo sapiens 12p BAC RP11-681I19 (Ros...    44   0.45 
gi|29124062|gb|AC092291.3| Homo sapiens chromosome 16 clone CTD-...    42   1.8  
gi|29029222|gb|AC009167.9| Homo sapiens chromosome 16 clone RP11...    42   1.8  
gi|28204325|gb|AE015944.1| Clostridium tetani E88, section 9 of ...    42   1.8  
gi|20197449|gb|AC005824.3| Arabidopsis thaliana chromosome 2 clo...    42   1.8  
gi|18873923|gb|AC104802.4| Homo sapiens BAC clone RP11-456I21 fr...    42   1.8  
gi|15625023|gb|AC073485.3| Homo sapiens BAC clone RP11-798J16 fr...    42   1.8  
gi|4581449|emb|AL049551.1|HS271N20 Human DNA sequence from clone...    42   1.8  
gi|11038560|gb|AC017002.4|AC017002 Homo sapiens BAC clone RP11-6...    42   1.8  
gi|27106418|emb|AL928576.8| Mouse DNA sequence from clone RP23-3...    42   1.8  
gi|9754734|gb|AF170869.1|AF170869 Allancastria cerisyi cytochrom...    42   1.8  
gi|6425618|gb|AC009978.3|AC009978 Genomic sequence for Arabidops...    42   1.8  
gi|13488750|dbj|AP000659.4| Homo sapiens genomic DNA, chromosome...    42   1.8  
gi|28189505|dbj|AP000758.5| Homo sapiens genomic DNA, chromosome...    42   1.8  
gi|4454587|gb|AC007123.1|AC007123 Arabidopsis thaliana BAC F21A2...    42   1.8  
gi|21622667|gb|AC117406.2| Homo sapiens X BAC CTD-2037D5 (CalTec...    40   7.1  
gi|28484546|ref|XM_130023.3| Mus musculus similar to hypothetica...    40   7.1  
gi|27375028|gb|AC063943.23| Homo sapiens 12 BAC RP11-18C24 (Rosw...    40   7.1  
gi|25167088|gb|AC105928.2| Oryza sativa (japonica cultivar-group...    40   7.1  
gi|20379600|gb|BC027743.1| Mus musculus, Similar to hypothetical...    40   7.1  
gi|18093140|gb|AC080162.7| Homo sapiens BAC clone RP11-400L8 fro...    40   7.1  
gi|14718390|gb|AC011303.9| Homo sapiens BAC clone RP11-342D6 fro...    40   7.1  
gi|14589667|gb|AC013457.7| Homo sapiens BAC clone RP11-77A13 fro...    40   7.1  
gi|17386224|gb|AC104179.1| Genomic sequence for Oryza sativa, Ni...    40   7.1  
gi|2578051|emb|Z93928.1|HS127B14 Human DNA sequence from clone R...    40   7.1  
gi|9754737|gb|AF170870.1|AF170870 Zerynthia rumina cytochrome c ...    40   7.1  
gi|13491255|gb|AC006448.14|AC006448 Homo sapiens chromosome 17, ...    40   7.1  
gi|25168646|emb|AL731810.20| Mouse DNA sequence from clone RP23-...    40   7.1  
gi|24940315|emb|AL929117.6| Mouse DNA sequence from clone RP23-4...    40   7.1  
gi|12324876|gb|AC011915.5|AC011915 Arabidopsis thaliana chromoso...    40   7.1  
gi|11935178|gb|AF326913.1|AF326913 Sinorhizobium meliloti succin...    40   7.1  
gi|11863053|gb|AC007432.9|AC007432 Homo sapiens chromosome 17, c...    40   7.1  
gi|15075850|emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021...    40   7.1  
gi|9929207|emb|Z93015.9|HS169I5 Human DNA sequence from clone RP...    40   7.1  
gi|14141441|emb|AL589946.4| Human DNA sequence from clone RP11-1...    40   7.1  
gi|26344655|dbj|AK075809.1| Mus musculus 10 day old male pancrea...    40   7.1  
gi|26352777|dbj|AK087829.1| Mus musculus 2 days pregnant adult f...    40   7.1  
gi|26352350|dbj|AK087148.1| Mus musculus 0 day neonate lung cDNA...    40   7.1  
gi|26350828|dbj|AK083895.1| Mus musculus 12 days embryo spinal g...    40   7.1  
gi|26325469|dbj|AK029518.1| Mus musculus adult male testis cDNA,...    40   7.1  
gi|26083425|dbj|AK033465.1| Mus musculus adult male colon cDNA, ...    40   7.1  
gi|23576394|dbj|AK112850.1| Ciona intestinalis cDNA, clone:citb0...    40   7.1  
gi|2809270|gb|AC002349.1|AC002349 Homo sapiens Xp22 PAC RPCI1-16...    40   7.1  
gi|23092951|emb|AL353742.23| Human DNA sequence from clone RP11-...    40   7.1  
gi|22449777|emb|AL732578.5| Human DNA sequence from clone RP11-4...    40   7.1  
gi|21732186|emb|Z99570.2|HS119E23 Human DNA sequence from clone ...    40   7.1  
gi|20338482|emb|AL645477.8| Mouse DNA sequence from clone RP23-1...    40   7.1  
gi|20068452|emb|AL589943.26| Human DNA sequence from clone RP11-...    40   7.1  

ALIGNMENTS
>gi|1322920|emb|Z72770.1|SCYGL248W S.cerevisiae chromosome VII reading frame ORF YGL248w
          Length = 1720

 Score = 2200 bits (1110), Expect = 0.0
 Identities = 1110/1110 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggttgtattcgaaataactatacttggggccaatggaggacccaccgaatacggaaca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441  atggttgtattcgaaataactatacttggggccaatggaggacccaccgaatacggaaca 500

                                                                        
Query: 61   cagtgttttatacttaagcctgctagaacagaggatccagaattaatagctgtagacggt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501  cagtgttttatacttaagcctgctagaacagaggatccagaattaatagctgtagacggt 560

                                                                        
Query: 121  ggtgcaggaatgtaccagctacgggagatgttggtccaagggcgaaatgaaaatgaaggt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561  ggtgcaggaatgtaccagctacgggagatgttggtccaagggcgaaatgaaaatgaaggt 620

                                                                        
Query: 181  gatgatgagcttgttccaagcttttatgaacatgatcgagagccaatagagttttttatt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621  gatgatgagcttgttccaagcttttatgaacatgatcgagagccaatagagttttttatt 680

                                                                        
Query: 241  gattccaaactgaacatacaaaagggattatccaagtccttgctacaatcattaaagagg 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681  gattccaaactgaacatacaaaagggattatccaagtccttgctacaatcattaaagagg 740

                                                                        
Query: 301  cagggagagcattttgaaagcgccaatacaatgaagaaaacttacgaggttttccaagga 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741  cagggagagcattttgaaagcgccaatacaatgaagaaaacttacgaggttttccaagga 800

                                                                        
Query: 361  attaccgactactacattacccatccccatctggaccatattagtgggctggtagtaaac 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801  attaccgactactacattacccatccccatctggaccatattagtgggctggtagtaaac 860

                                                                        
Query: 421  tccccctcaatatatgagcaggaaaacagtaaaaagaaaactatttggggattaccgcat 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861  tccccctcaatatatgagcaggaaaacagtaaaaagaaaactatttggggattaccgcat 920

                                                                        
Query: 481  actattgacgttttgcaaaagcatgtctttaatgacttaatatggccagatttaacggca 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921  actattgacgttttgcaaaagcatgtctttaatgacttaatatggccagatttaacggca 980

                                                                        
Query: 541  gaacgttcaagaaaattgaagctaaaatgcttgaatccgaaggaagttcaaaagtgcact 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981  gaacgttcaagaaaattgaagctaaaatgcttgaatccgaaggaagttcaaaagtgcact 1040

                                                                        
Query: 601  atctttccttgggatgtaataccgttcaaagttcatcatgggataggcgtcaagactggc 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 atctttccttgggatgtaataccgttcaaagttcatcatgggataggcgtcaagactggc 1100

                                                                        
Query: 661  gcgccggtatacagcaccttctatatcttcagagacaggaaaagcaaagactgtataata 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 gcgccggtatacagcaccttctatatcttcagagacaggaaaagcaaagactgtataata 1160

                                                                        
Query: 721  gtttgcggagatgttgagcaggaccgcagagaatctgaagaatctctacttgaagaattt 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1161 gtttgcggagatgttgagcaggaccgcagagaatctgaagaatctctacttgaagaattt 1220

                                                                        
Query: 781  tggtcttacgttgctgaaaatataccgcttgtgcatctcaagggtatattagtcgaatgt 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1221 tggtcttacgttgctgaaaatataccgcttgtgcatctcaagggtatattagtcgaatgt 1280

                                                                        
Query: 841  tcatgcccattatcttccaagcccgagcaattgtatggtcatctatctccaatatattta 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1281 tcatgcccattatcttccaagcccgagcaattgtatggtcatctatctccaatatattta 1340

                                                                        
Query: 901  atcaacgaattatccaatttgaacactttatacaacagtagtaagggattaagcggtttg 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1341 atcaacgaattatccaatttgaacactttatacaacagtagtaagggattaagcggtttg 1400

                                                                        
Query: 961  aatgttatcgttactcacgttaagtcaacacctgctaaaagagacccaagactaaccata 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1401 aatgttatcgttactcacgttaagtcaacacctgctaaaagagacccaagactaaccata 1460

                                                                        
Query: 1021 ctcgaagagttacgatttttagctgaggagaggaacttaggagacttgagaatatctatt 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1461 ctcgaagagttacgatttttagctgaggagaggaacttaggagacttgagaatatctatt 1520

                                          
Query: 1081 gcgctagaaggccacactttgtttctataa 1110
            ||||||||||||||||||||||||||||||
Sbjct: 1521 gcgctagaaggccacactttgtttctataa 1550


>gi|1150575|emb|X94357.1|SCHRVIILT S.cerevisiae left telomeric region from chromosome VII
          Length = 39411

 Score = 2200 bits (1110), Expect = 0.0
 Identities = 1110/1110 (100%)
 Strand = Plus / Plus

                                                                         
Query: 1     atggttgtattcgaaataactatacttggggccaatggaggacccaccgaatacggaaca 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35653 atggttgtattcgaaataactatacttggggccaatggaggacccaccgaatacggaaca 35712

                                                                         
Query: 61    cagtgttttatacttaagcctgctagaacagaggatccagaattaatagctgtagacggt 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35713 cagtgttttatacttaagcctgctagaacagaggatccagaattaatagctgtagacggt 35772

                                                                         
Query: 121   ggtgcaggaatgtaccagctacgggagatgttggtccaagggcgaaatgaaaatgaaggt 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35773 ggtgcaggaatgtaccagctacgggagatgttggtccaagggcgaaatgaaaatgaaggt 35832

                                                                         
Query: 181   gatgatgagcttgttccaagcttttatgaacatgatcgagagccaatagagttttttatt 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35833 gatgatgagcttgttccaagcttttatgaacatgatcgagagccaatagagttttttatt 35892

                                                                         
Query: 241   gattccaaactgaacatacaaaagggattatccaagtccttgctacaatcattaaagagg 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35893 gattccaaactgaacatacaaaagggattatccaagtccttgctacaatcattaaagagg 35952

                                                                         
Query: 301   cagggagagcattttgaaagcgccaatacaatgaagaaaacttacgaggttttccaagga 360
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35953 cagggagagcattttgaaagcgccaatacaatgaagaaaacttacgaggttttccaagga 36012

                                                                         
Query: 361   attaccgactactacattacccatccccatctggaccatattagtgggctggtagtaaac 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36013 attaccgactactacattacccatccccatctggaccatattagtgggctggtagtaaac 36072

                                                                         
Query: 421   tccccctcaatatatgagcaggaaaacagtaaaaagaaaactatttggggattaccgcat 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36073 tccccctcaatatatgagcaggaaaacagtaaaaagaaaactatttggggattaccgcat 36132

                                                                         
Query: 481   actattgacgttttgcaaaagcatgtctttaatgacttaatatggccagatttaacggca 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36133 actattgacgttttgcaaaagcatgtctttaatgacttaatatggccagatttaacggca 36192

                                                                         
Query: 541   gaacgttcaagaaaattgaagctaaaatgcttgaatccgaaggaagttcaaaagtgcact 600
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36193 gaacgttcaagaaaattgaagctaaaatgcttgaatccgaaggaagttcaaaagtgcact 36252

                                                                         
Query: 601   atctttccttgggatgtaataccgttcaaagttcatcatgggataggcgtcaagactggc 660
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36253 atctttccttgggatgtaataccgttcaaagttcatcatgggataggcgtcaagactggc 36312

                                                                         
Query: 661   gcgccggtatacagcaccttctatatcttcagagacaggaaaagcaaagactgtataata 720
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36313 gcgccggtatacagcaccttctatatcttcagagacaggaaaagcaaagactgtataata 36372

                                                                         
Query: 721   gtttgcggagatgttgagcaggaccgcagagaatctgaagaatctctacttgaagaattt 780
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36373 gtttgcggagatgttgagcaggaccgcagagaatctgaagaatctctacttgaagaattt 36432

                                                                         
Query: 781   tggtcttacgttgctgaaaatataccgcttgtgcatctcaagggtatattagtcgaatgt 840
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36433 tggtcttacgttgctgaaaatataccgcttgtgcatctcaagggtatattagtcgaatgt 36492

                                                                         
Query: 841   tcatgcccattatcttccaagcccgagcaattgtatggtcatctatctccaatatattta 900
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36493 tcatgcccattatcttccaagcccgagcaattgtatggtcatctatctccaatatattta 36552

                                                                         
Query: 901   atcaacgaattatccaatttgaacactttatacaacagtagtaagggattaagcggtttg 960
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36553 atcaacgaattatccaatttgaacactttatacaacagtagtaagggattaagcggtttg 36612

                                                                         
Query: 961   aatgttatcgttactcacgttaagtcaacacctgctaaaagagacccaagactaaccata 1020
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36613 aatgttatcgttactcacgttaagtcaacacctgctaaaagagacccaagactaaccata 36672

                                                                         
Query: 1021  ctcgaagagttacgatttttagctgaggagaggaacttaggagacttgagaatatctatt 1080
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36673 ctcgaagagttacgatttttagctgaggagaggaacttaggagacttgagaatatctatt 36732

                                           
Query: 1081  gcgctagaaggccacactttgtttctataa 1110
             ||||||||||||||||||||||||||||||
Sbjct: 36733 gcgctagaaggccacactttgtttctataa 36762


>gi|172228|gb|M17781.1|YSCPPR S.cerevisiae low-affinity cAMP phosphodiesterase gene, complete cds
          Length = 1777

 Score = 2192 bits (1106), Expect = 0.0
 Identities = 1109/1110 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggttgtattcgaaataactatacttggggccaatggaggacccaccgaatacggaaca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606  atggttgtattcgaaataactatacttggggccaatggaggacccaccgaatacggaaca 665

                                                                        
Query: 61   cagtgttttatacttaagcctgctagaacagaggatccagaattaatagctgtagacggt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666  cagtgttttatacttaagcctgctagaacagaggatccagaattaatagctgtagacggt 725

                                                                        
Query: 121  ggtgcaggaatgtaccagctacgggagatgttggtccaagggcgaaatgaaaatgaaggt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726  ggtgcaggaatgtaccagctacgggagatgttggtccaagggcgaaatgaaaatgaaggt 785

                                                                        
Query: 181  gatgatgagcttgttccaagcttttatgaacatgatcgagagccaatagagttttttatt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786  gatgatgagcttgttccaagcttttatgaacatgatcgagagccaatagagttttttatt 845

                                                                        
Query: 241  gattccaaactgaacatacaaaagggattatccaagtccttgctacaatcattaaagagg 300
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 846  gattccaaactgaacatacaaaagggattatccaagtccttcctacaatcattaaagagg 905

                                                                        
Query: 301  cagggagagcattttgaaagcgccaatacaatgaagaaaacttacgaggttttccaagga 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906  cagggagagcattttgaaagcgccaatacaatgaagaaaacttacgaggttttccaagga 965

                                                                        
Query: 361  attaccgactactacattacccatccccatctggaccatattagtgggctggtagtaaac 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966  attaccgactactacattacccatccccatctggaccatattagtgggctggtagtaaac 1025

                                                                        
Query: 421  tccccctcaatatatgagcaggaaaacagtaaaaagaaaactatttggggattaccgcat 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 tccccctcaatatatgagcaggaaaacagtaaaaagaaaactatttggggattaccgcat 1085

                                                                        
Query: 481  actattgacgttttgcaaaagcatgtctttaatgacttaatatggccagatttaacggca 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 actattgacgttttgcaaaagcatgtctttaatgacttaatatggccagatttaacggca 1145

                                                                        
Query: 541  gaacgttcaagaaaattgaagctaaaatgcttgaatccgaaggaagttcaaaagtgcact 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 gaacgttcaagaaaattgaagctaaaatgcttgaatccgaaggaagttcaaaagtgcact 1205

                                                                        
Query: 601  atctttccttgggatgtaataccgttcaaagttcatcatgggataggcgtcaagactggc 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1206 atctttccttgggatgtaataccgttcaaagttcatcatgggataggcgtcaagactggc 1265

                                                                        
Query: 661  gcgccggtatacagcaccttctatatcttcagagacaggaaaagcaaagactgtataata 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1266 gcgccggtatacagcaccttctatatcttcagagacaggaaaagcaaagactgtataata 1325

                                                                        
Query: 721  gtttgcggagatgttgagcaggaccgcagagaatctgaagaatctctacttgaagaattt 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1326 gtttgcggagatgttgagcaggaccgcagagaatctgaagaatctctacttgaagaattt 1385

                                                                        
Query: 781  tggtcttacgttgctgaaaatataccgcttgtgcatctcaagggtatattagtcgaatgt 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1386 tggtcttacgttgctgaaaatataccgcttgtgcatctcaagggtatattagtcgaatgt 1445

                                                                        
Query: 841  tcatgcccattatcttccaagcccgagcaattgtatggtcatctatctccaatatattta 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1446 tcatgcccattatcttccaagcccgagcaattgtatggtcatctatctccaatatattta 1505

                                                                        
Query: 901  atcaacgaattatccaatttgaacactttatacaacagtagtaagggattaagcggtttg 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1506 atcaacgaattatccaatttgaacactttatacaacagtagtaagggattaagcggtttg 1565

                                                                        
Query: 961  aatgttatcgttactcacgttaagtcaacacctgctaaaagagacccaagactaaccata 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1566 aatgttatcgttactcacgttaagtcaacacctgctaaaagagacccaagactaaccata 1625

                                                                        
Query: 1021 ctcgaagagttacgatttttagctgaggagaggaacttaggagacttgagaatatctatt 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1626 ctcgaagagttacgatttttagctgaggagaggaacttaggagacttgagaatatctatt 1685

                                          
Query: 1081 gcgctagaaggccacactttgtttctataa 1110
            ||||||||||||||||||||||||||||||
Sbjct: 1686 gcgctagaaggccacactttgtttctataa 1715


>gi|22832035|gb|AE003451.3| Drosophila melanogaster chromosome X section 35 of 74 of the complete
             sequence
          Length = 217729

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 149   tgttggtccaagggcgaaatgaaaa 173
             |||||||||||||||||||||||||
Sbjct: 82898 tgttggtccaagggcgaaatgaaaa 82874


>gi|27369428|gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (Roswell Park Cancer Institute
              Human BAC Library) complete sequence
          Length = 166613

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 149    tgttggtccaagggcgaaatgaaaa 173
              |||||||||||||||||||||||||
Sbjct: 130544 tgttggtccaagggcgaaatgaaaa 130568


>gi|21328490|gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 163710

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 149   tgttggtccaagggcgaaatgaaaa 173
             |||||||||||||||||||||||||
Sbjct: 91848 tgttggtccaagggcgaaatgaaaa 91872


>gi|15799528|gb|AC087310.9| Homo sapiens 12p BAC RP11-681I19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 109567

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 438   gcaggaaaacagtaaaaagaaa 459
             ||||||||||||||||||||||
Sbjct: 95840 gcaggaaaacagtaaaaagaaa 95861


>gi|29124062|gb|AC092291.3| Homo sapiens chromosome 16 clone CTD-2502C11, complete sequence
          Length = 194551

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 193    gttccaagcttttatgaacatgatc 217
              ||||||||||| |||||||||||||
Sbjct: 179364 gttccaagcttatatgaacatgatc 179388


>gi|29029222|gb|AC009167.9| Homo sapiens chromosome 16 clone RP11-82O18, complete sequence
          Length = 193633

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 193    gttccaagcttttatgaacatgatc 217
              ||||||||||| |||||||||||||
Sbjct: 135933 gttccaagcttatatgaacatgatc 135909


>gi|28204325|gb|AE015944.1| Clostridium tetani E88, section 9 of 10 of the complete genome
          Length = 300205

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 549   aagaaaattgaagctaaaatg 569
             |||||||||||||||||||||
Sbjct: 84104 aagaaaattgaagctaaaatg 84084


>gi|20197449|gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 map B68, complete
             sequence
          Length = 118196

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 231   gttttttattgattccaaact 251
             |||||||||||||||||||||
Sbjct: 30814 gttttttattgattccaaact 30834


>gi|18873923|gb|AC104802.4| Homo sapiens BAC clone RP11-456I21 from 2, complete sequence
          Length = 30108

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 369  ctactacattacccatccccatctg 393
            |||||||||| ||||||||||||||
Sbjct: 7061 ctactacatttcccatccccatctg 7037


>gi|15625023|gb|AC073485.3| Homo sapiens BAC clone RP11-798J16 from 2, complete sequence
          Length = 140811

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 545    gttcaagaaaattgaagctaa 565
              |||||||||||||||||||||
Sbjct: 136896 gttcaagaaaattgaagctaa 136916


>gi|4581449|emb|AL049551.1|HS271N20 Human DNA sequence from clone RP1-271N20 on chromosome 6q11.1-12,
             complete sequence
          Length = 65237

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 240   tgattccaaactgaacatacaaaag 264
             ||||||||||||||| |||||||||
Sbjct: 36440 tgattccaaactgaagatacaaaag 36464


>gi|11038560|gb|AC017002.4|AC017002 Homo sapiens BAC clone RP11-68E19 from 2, complete sequence
          Length = 205662

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 689   tcagagacaggaaaagcaaag 709
             |||||||||||||||||||||
Sbjct: 81693 tcagagacaggaaaagcaaag 81713


>gi|27106418|emb|AL928576.8| Mouse DNA sequence from clone RP23-343C17 on chromosome 2, complete
             sequence
          Length = 188170

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 444   aaacagtaaaaagaaaactat 464
             |||||||||||||||||||||
Sbjct: 96657 aaacagtaaaaagaaaactat 96677


>gi|9754734|gb|AF170869.1|AF170869 Allancastria cerisyi cytochrome c oxidase I (COI) gene, partial cds;
            tRNA-Leu gene, complete sequence; and cytochrome c
            oxidase II (COII) gene, complete cds; mitochondrial genes
            for mitochondrial products
          Length = 2300

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 893  tatatttaatcaacgaattat 913
            |||||||||||||||||||||
Sbjct: 1427 tatatttaatcaacgaattat 1447


>gi|6425618|gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis thaliana BAC T23E18 from chromosome I,
             complete sequence
          Length = 97554

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 169   gaaaatgaaggtgatgatgagcttg 193
             ||||||| |||||||||||||||||
Sbjct: 21128 gaaaatggaggtgatgatgagcttg 21152


>gi|13488750|dbj|AP000659.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-1B14, complete
             sequences
          Length = 96281

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 439   caggaaaacagtaaaaagaaa 459
             |||||||||||||||||||||
Sbjct: 70135 caggaaaacagtaaaaagaaa 70115


>gi|28189505|dbj|AP000758.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-775A2, complete
             sequence
          Length = 163025

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 439   caggaaaacagtaaaaagaaa 459
             |||||||||||||||||||||
Sbjct: 22840 caggaaaacagtaaaaagaaa 22820


>gi|4454587|gb|AC007123.1|AC007123 Arabidopsis thaliana BAC F21A20 from chromosome V near 61 cM, complete
             sequence
          Length = 133195

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 231   gttttttattgattccaaact 251
             |||||||||||||||||||||
Sbjct: 24599 gttttttattgattccaaact 24619


>gi|21622667|gb|AC117406.2| Homo sapiens X BAC CTD-2037D5 (CalTech Human BAC Library D) complete
             sequence
          Length = 125360

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1053  gaacttaggagacttgagaa 1072
             ||||||||||||||||||||
Sbjct: 17890 gaacttaggagacttgagaa 17909


>gi|28484546|ref|XM_130023.3| Mus musculus similar to hypothetical protein FLJ22002 [Homo sapiens]
            (LOC208967), mRNA
          Length = 4022

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1062 agacttgagaatatctattg 1081
            ||||||||||||||||||||
Sbjct: 2156 agacttgagaatatctattg 2137


>gi|27375028|gb|AC063943.23| Homo sapiens 12 BAC RP11-18C24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 137242

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 444   aaacagtaaaaagaaaacta 463
             ||||||||||||||||||||
Sbjct: 60972 aaacagtaaaaagaaaacta 60991


>gi|25167088|gb|AC105928.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0014O06,
              complete sequence
          Length = 168031

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 450    taaaaagaaaactatttggggatt 473
              |||||| |||||||||||||||||
Sbjct: 154493 taaaaaaaaaactatttggggatt 154516


>gi|20379600|gb|BC027743.1| Mus musculus, Similar to hypothetical protein FLJ22002, clone
            MGC:29349 IMAGE:5037172, mRNA, complete cds
          Length = 1175

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1062 agacttgagaatatctattg 1081
            ||||||||||||||||||||
Sbjct: 558  agacttgagaatatctattg 539


>gi|18093140|gb|AC080162.7| Homo sapiens BAC clone RP11-400L8 from 2, complete sequence
          Length = 171653

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   acattacccatccccatctg 393
             ||||||||||||||||||||
Sbjct: 15428 acattacccatccccatctg 15409


>gi|14718390|gb|AC011303.9| Homo sapiens BAC clone RP11-342D6 from 2, complete sequence
          Length = 188616

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 908   aattatccaatttgaacact 927
             ||||||||||||||||||||
Sbjct: 65825 aattatccaatttgaacact 65844


>gi|14589667|gb|AC013457.7| Homo sapiens BAC clone RP11-77A13 from 2, complete sequence
          Length = 145242

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 340   acttacgaggttttccaaggaatt 363
             ||||| ||||||||||||||||||
Sbjct: 76423 acttaagaggttttccaaggaatt 76446


>gi|17386224|gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0021B21, from chromosome 3, complete sequence
          Length = 166777

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 450    taaaaagaaaactatttggggatt 473
              |||||| |||||||||||||||||
Sbjct: 140377 taaaaaaaaaactatttggggatt 140354


>gi|2578051|emb|Z93928.1|HS127B14 Human DNA sequence from clone RP1-127B14 on chromosome Xq22, complete
             sequence
          Length = 126263

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 550   agaaaattgaagctaaaatg 569
             ||||||||||||||||||||
Sbjct: 62814 agaaaattgaagctaaaatg 62833


>gi|9754737|gb|AF170870.1|AF170870 Zerynthia rumina cytochrome c oxidase I (COI) gene, partial cds;
            tRNA-Leu gene, complete sequence; and cytochrome c
            oxidase II (COII) gene, complete cds; mitochondrial genes
            for mitochondrial products
          Length = 2302

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 894  atatttaatcaacgaattat 913
            ||||||||||||||||||||
Sbjct: 1429 atatttaatcaacgaattat 1448


>gi|13491255|gb|AC006448.14|AC006448 Homo sapiens chromosome 17, clone RP11-423M11, complete sequence
          Length = 127587

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   gaaatgaaaatgaaggtgat 183
             ||||||||||||||||||||
Sbjct: 18892 gaaatgaaaatgaaggtgat 18911


>gi|25168646|emb|AL731810.20| Mouse DNA sequence from clone RP23-465B20 on chromosome 4, complete
              sequence
          Length = 173609

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 437    agcaggaaaacagtaaaaagaaaa 460
              ||||||||||||| ||||||||||
Sbjct: 160935 agcaggaaaacagaaaaaagaaaa 160912


>gi|24940315|emb|AL929117.6| Mouse DNA sequence from clone RP23-442K5 on chromosome 2, complete
             sequence
          Length = 161739

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1062  agacttgagaatatctattg 1081
             ||||||||||||||||||||
Sbjct: 35425 agacttgagaatatctattg 35406


>gi|12324876|gb|AC011915.5|AC011915 Arabidopsis thaliana chromosome 1 BAC T26J14 genomic sequence, complete
             sequence
          Length = 73635

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 443   aaaacagtaaaaagaaaact 462
             ||||||||||||||||||||
Sbjct: 33631 aaaacagtaaaaagaaaact 33612


>gi|11935178|gb|AF326913.1|AF326913 Sinorhizobium meliloti succinyl-CoA synthetase beta subunit (sucC)
           gene, complete cds
          Length = 1197

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 742 gaccgcagagaatctgaaga 761
           ||||||||||||||||||||
Sbjct: 495 gaccgcagagaatctgaaga 514


>gi|11863053|gb|AC007432.9|AC007432 Homo sapiens chromosome 17, clone RP11-166M16, complete sequence
          Length = 158045

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   gaaatgaaaatgaaggtgat 183
             ||||||||||||||||||||
Sbjct: 65183 gaaatgaaaatgaaggtgat 65164


>gi|15075850|emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12
          Length = 333800

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 742    gaccgcagagaatctgaaga 761
              ||||||||||||||||||||
Sbjct: 271370 gaccgcagagaatctgaaga 271351


>gi|9929207|emb|Z93015.9|HS169I5 Human DNA sequence from clone RP1-169I5 on chromosome Xp11. Contains
              ESTs, STSs, GSSs and CpG islands. Contains the 3' part of
              the DDX3 gene for DEAD/H (Asp-Glu-Ala-Asp/His) box
              polypeptide 3 and a novel gene for a leucine rich protein,
              complete sequence
          Length = 133568

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    gggagatgttggtccaaggg 162
              ||||||||||||||||||||
Sbjct: 128367 gggagatgttggtccaaggg 128386


>gi|14141441|emb|AL589946.4| Human DNA sequence from clone RP11-124I4 on chromosome 6, complete
            sequence
          Length = 85086

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 502  catgtctttaatgacttaat 521
            ||||||||||||||||||||
Sbjct: 8605 catgtctttaatgacttaat 8624


>gi|26344655|dbj|AK075809.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
            enriched library, clone:1810074E05 product:dystrophin,
            muscular dystrophy, full insert sequence
          Length = 1384

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1047 ggagaggaacttaggagact 1066
            ||||||||||||||||||||
Sbjct: 1249 ggagaggaacttaggagact 1230


>gi|26352777|dbj|AK087829.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
            full-length enriched library, clone:E330026B12
            product:dystrophin, muscular dystrophy, full insert
            sequence
          Length = 1298

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1047 ggagaggaacttaggagact 1066
            ||||||||||||||||||||
Sbjct: 1249 ggagaggaacttaggagact 1230


>gi|26352350|dbj|AK087148.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched
            library, clone:E030030A01 product:hypothetical Tryptophan
            synthase beta subunit-like PLP-dependent enzymes
            structure containing protein, full insert sequence
          Length = 1714

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1062 agacttgagaatatctattg 1081
            ||||||||||||||||||||
Sbjct: 543  agacttgagaatatctattg 524


>gi|26350828|dbj|AK083895.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
            enriched library, clone:D130053F09 product:hypothetical
            Tryptophan synthase beta subunit-like PLP-dependent
            enzymes structure containing protein, full insert
            sequence
          Length = 3899

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1062 agacttgagaatatctattg 1081
            ||||||||||||||||||||
Sbjct: 2033 agacttgagaatatctattg 2014


>gi|26325469|dbj|AK029518.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4921511K01 product:hypothetical Tryptophan
            synthase beta subunit-like PLP-dependent enzymes
            structure containing protein, full insert sequence
          Length = 2618

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1062 agacttgagaatatctattg 1081
            ||||||||||||||||||||
Sbjct: 2034 agacttgagaatatctattg 2015


>gi|26083425|dbj|AK033465.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched
            library, clone:9030212F24 product:hypothetical Tryptophan
            synthase beta subunit-like PLP-dependent enzymes
            structure containing protein, full insert sequence
          Length = 1663

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1062 agacttgagaatatctattg 1081
            ||||||||||||||||||||
Sbjct: 430  agacttgagaatatctattg 411


>gi|23576394|dbj|AK112850.1| Ciona intestinalis cDNA, clone:citb007a23, full insert sequence
          Length = 2903

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 53   acggaacacagtgttttatactta 76
            ||||||| ||||||||||||||||
Sbjct: 2607 acggaacccagtgttttatactta 2584


>gi|2809270|gb|AC002349.1|AC002349 Homo sapiens Xp22 PAC RPCI1-167A22 (from Roswell Park Cancer Center)
              complete sequence
          Length = 159863

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1053   gaacttaggagacttgagaa 1072
              ||||||||||||||||||||
Sbjct: 155499 gaacttaggagacttgagaa 155518


>gi|23092951|emb|AL353742.23| Human DNA sequence from clone RP11-505C13 on chromosome 9q31.1-32,
              complete sequence
          Length = 157657

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 383    atccccatctggaccatatt 402
              ||||||||||||||||||||
Sbjct: 119373 atccccatctggaccatatt 119354


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
  or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 19, 2003 10:12 PM
  Number of letters in database: -669,803,131
  Number of sequences in database:  1,706,607
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,063,263
Number of Sequences: 1706607
Number of extensions: 5063263
Number of successful extensions: 38234
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38161
Number of HSP's gapped (non-prelim): 73
length of query: 1110
length of database: 7,920,131,457
effective HSP length: 22
effective length of query: 1088
effective length of database: 7,882,586,103
effective search space: 8576253680064
effective search space used: 8576253680064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)






 
BLASTX 2.2.5 [Nov-16-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
RID: 1048224158-029017-31800
Query= 
         (1110 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           1,375,764 sequences; 441,946,756 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6321189|ref|NP_011266.1| 3',5'-Cyclic-nucleotide phosphodiest...   695   0.0  
gi|172229|gb|AAA34896.1| low-affinity cyclic AMP phosphodiesterase    695   0.0  
gi|19075837|ref|NP_588337.1| 3',5'-cyclic-nucleotide phosphodies...   116   5e-25
gi|16122901|ref|NP_406214.1| putative 3',5'-cyclic-nucleotide ph...    99   9e-20
gi|22125171|ref|NP_668594.1| hypothetical [Yersinia pestis KIM] ...    99   9e-20
gi|6831520|sp|Q56686|CPDP_VIBFI 3',5'-CYCLIC-NUCLEOTIDE PHOSPHOD...    97   3e-19
gi|1168982|sp|P32782|CNA1_CANAL 3',5'-cyclic-nucleotide phosphod...    89   2e-16
gi|28918803|gb|EAA28472.1| hypothetical protein [Neurospora crassa]    80   6e-14
gi|1352097|sp|P12019|CN17_DICDI 3',5'-CYCLIC-NUCLEOTIDE PHOSPHOD...    62   2e-08
gi|84080|pir||A25346 3',5'-cyclic-nucleotide phosphodiesterase (...    62   2e-08
gi|22956071|gb|ZP_00003872.1| hypothetical protein [Nitrosomonas...    45   0.003
gi|8469145|sp|Q45739|C1BB_BACTU PESTICIDIAL CRYSTAL PROTEIN CRY1...    33   6.0  
gi|21244987|ref|NP_644569.1| glycerol-3-phosphate acyltransferas...    33   6.0  
gi|1200002|emb|CAA65003.1| cry1Ba2 [Bacillus thuringiensis] >gi|...    33   7.9  
gi|14486714|gb|AAK63251.1|AF368257_1 Cry1Ba [Bacillus thuringien...    33   7.9  
gi|1345842|sp|P05517|C1BA_BACTK PESTICIDIAL CRYSTAL PROTEIN CRY1...    33   7.9  

ALIGNMENTS
>gi|6321189|ref|NP_011266.1| 3',5'-Cyclic-nucleotide phosphodiesterase, low affinity; Pde1p
            [Saccharomyces cerevisiae]
 gi|1705954|sp|P22434|CNA1_YEAST 3',5'-CYCLIC-NUCLEOTIDE PHOSPHODIESTERASE 1 (PDEASE 1) (LOW-AFFINITY
            CAMP PHOSPHODIESTERASE) (3':5'-CNP)
 gi|2144458|pir||ESBYPC 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17), low-affinity
            - yeast (Saccharomyces cerevisiae)
 gi|1150591|emb|CAA64139.1| ORF NRB369~EMBL:SCPPR;M17781~PIR:ESBYPC;S05879 [Saccharomyces
            cerevisiae]
 gi|1322921|emb|CAA96968.1| ORF YGL248w [Saccharomyces cerevisiae]
          Length = 369

 Score =  695 bits (1794), Expect = 0.0
 Identities = 342/369 (92%), Positives = 342/369 (92%)
 Frame = +1

Query: 1    MVVFEITILGANGGPTEYGTQCFILKPARTEDPELIAVDGGAGMYQLREMLVQGRNENEG 180
            MVVFEITILGANGGPTEYGTQCFILKPARTEDPELIAVDGGAGMYQLREMLVQGRNENEG
Sbjct: 1    MVVFEITILGANGGPTEYGTQCFILKPARTEDPELIAVDGGAGMYQLREMLVQGRNENEG 60

Query: 181  DDELVPSFYEHDREPIEFFIDSKLNIXXXXXXXXXXXXXXXXEHFESANTMKKTYEVFQG 360
            DDELVPSFYEHDREPIEFFIDSKLNI                EHFESANTMKKTYEVFQG
Sbjct: 61   DDELVPSFYEHDREPIEFFIDSKLNIQKGLSKSLLQSLKRQGEHFESANTMKKTYEVFQG 120

Query: 361  ITDYYITHPHLDHISGLVVNSPSIYEQENSKKKTIWGLPHTIDVLQKHVFNDLIWPDLTA 540
            ITDYYITHPHLDHISGLVVNSPSIYEQENSKKKTIWGLPHTIDVLQKHVFNDLIWPDLTA
Sbjct: 121  ITDYYITHPHLDHISGLVVNSPSIYEQENSKKKTIWGLPHTIDVLQKHVFNDLIWPDLTA 180

Query: 541  ERSRKLKLKCLNPKEVQKCTIFPWDVIPFKVHHGIGVKTGAPVYSTFYIFRDRKSKDCII 720
            ERSRKLKLKCLNPKEVQKCTIFPWDVIPFKVHHGIGVKTGAPVYSTFYIFRDRKSKDCII
Sbjct: 181  ERSRKLKLKCLNPKEVQKCTIFPWDVIPFKVHHGIGVKTGAPVYSTFYIFRDRKSKDCII 240

Query: 721  VCGDVEQDXXXXXXXXXXXFWSYVAENIPLVHLKGILVECSCPLSSKPEQLYGHLSPIYL 900
            VCGDVEQD           FWSYVAENIPLVHLKGILVECSCPLSSKPEQLYGHLSPIYL
Sbjct: 241  VCGDVEQDRRESEESLLEEFWSYVAENIPLVHLKGILVECSCPLSSKPEQLYGHLSPIYL 300

Query: 901  INELSNLNTLYNSSKGLSGLNVIVTHVKSTPAKRDPRLTILEELRFLAEERNLGDLRISI 1080
            INELSNLNTLYNSSKGLSGLNVIVTHVKSTPAKRDPRLTILEELRFLAEERNLGDLRISI
Sbjct: 301  INELSNLNTLYNSSKGLSGLNVIVTHVKSTPAKRDPRLTILEELRFLAEERNLGDLRISI 360

Query: 1081 ALEGHTLFL 1107
            ALEGHTLFL
Sbjct: 361  ALEGHTLFL 369


>gi|172229|gb|AAA34896.1| low-affinity cyclic AMP phosphodiesterase
          Length = 369

 Score =  695 bits (1794), Expect = 0.0
 Identities = 342/369 (92%), Positives = 342/369 (92%)
 Frame = +1

Query: 1    MVVFEITILGANGGPTEYGTQCFILKPARTEDPELIAVDGGAGMYQLREMLVQGRNENEG 180
            MVVFEITILGANGGPTEYGTQCFILKPARTEDPELIAVDGGAGMYQLREMLVQGRNENEG
Sbjct: 1    MVVFEITILGANGGPTEYGTQCFILKPARTEDPELIAVDGGAGMYQLREMLVQGRNENEG 60

Query: 181  DDELVPSFYEHDREPIEFFIDSKLNIXXXXXXXXXXXXXXXXEHFESANTMKKTYEVFQG 360
            DDELVPSFYEHDREPIEFFIDSKLNI                EHFESANTMKKTYEVFQG
Sbjct: 61   DDELVPSFYEHDREPIEFFIDSKLNIQKGLSKSFLQSLKRQGEHFESANTMKKTYEVFQG 120

Query: 361  ITDYYITHPHLDHISGLVVNSPSIYEQENSKKKTIWGLPHTIDVLQKHVFNDLIWPDLTA 540
            ITDYYITHPHLDHISGLVVNSPSIYEQENSKKKTIWGLPHTIDVLQKHVFNDLIWPDLTA
Sbjct: 121  ITDYYITHPHLDHISGLVVNSPSIYEQENSKKKTIWGLPHTIDVLQKHVFNDLIWPDLTA 180

Query: 541  ERSRKLKLKCLNPKEVQKCTIFPWDVIPFKVHHGIGVKTGAPVYSTFYIFRDRKSKDCII 720
            ERSRKLKLKCLNPKEVQKCTIFPWDVIPFKVHHGIGVKTGAPVYSTFYIFRDRKSKDCII
Sbjct: 181  ERSRKLKLKCLNPKEVQKCTIFPWDVIPFKVHHGIGVKTGAPVYSTFYIFRDRKSKDCII 240

Query: 721  VCGDVEQDXXXXXXXXXXXFWSYVAENIPLVHLKGILVECSCPLSSKPEQLYGHLSPIYL 900
            VCGDVEQD           FWSYVAENIPLVHLKGILVECSCPLSSKPEQLYGHLSPIYL
Sbjct: 241  VCGDVEQDRRESEESLLEEFWSYVAENIPLVHLKGILVECSCPLSSKPEQLYGHLSPIYL 300

Query: 901  INELSNLNTLYNSSKGLSGLNVIVTHVKSTPAKRDPRLTILEELRFLAEERNLGDLRISI 1080
            INELSNLNTLYNSSKGLSGLNVIVTHVKSTPAKRDPRLTILEELRFLAEERNLGDLRISI
Sbjct: 301  INELSNLNTLYNSSKGLSGLNVIVTHVKSTPAKRDPRLTILEELRFLAEERNLGDLRISI 360

Query: 1081 ALEGHTLFL 1107
            ALEGHTLFL
Sbjct: 361  ALEGHTLFL 369


>gi|19075837|ref|NP_588337.1| 3',5'-cyclic-nucleotide phosphodiesterase [Schizosaccharomyces pombe]
 gi|544049|sp|P36599|CNA1_SCHPO 3',5'-cyclic-nucleotide phosphodiesterase (PDEase)
 gi|1076909|pir||S22442 probable 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) pde1
            - fission yeast (Schizosaccharomyces pombe)
 gi|238844|gb|AAB20315.1| Dictyostelium discoideum phosphodiesterase homolog
            [Schizosaccharomyces pombe]
 gi|3581909|emb|CAA20848.1| 3',5'-cyclic-nucleotide phosphodiesterase [Schizosaccharomyces pombe]
 gi|228926|prf||1814444A pde1 gene
          Length = 346

 Score =  116 bits (291), Expect = 5e-25
 Identities = 102/352 (28%), Positives = 155/352 (44%), Gaps = 2/352 (0%)
 Frame = +1

Query: 10   FEITILGANGGPTEYGTQCFILKPARTEDPELIAVDGGAGMYQLREMLVQGRNENEGDDE 189
            F +  LG NGGP E      ++     +  E+I++DGG+ +  L E L+Q ++ +     
Sbjct: 25   FTLYSLGQNGGPLESCCSSHLISDGAFQ--EIISLDGGSHLSALVE-LIQSKHLS----- 76

Query: 190  LVPSFYEHDREPIEFFIDSKLNIXXXXXXXXXXXXXXXXEHFESANTMKKTYEVFQGITD 369
                            +DS  +I                 H              Q I  
Sbjct: 77   ----------------VDSWSSITKYDNYTVENESYAKAWHLSE-----------QRIKT 109

Query: 370  YYITHPHLDHISGLVVNSPSIYEQENSKKKTIWGLPHTIDVLQKHVFNDLIWPDLTAERS 549
            + ITH HLDHI G V+NS     Q     +TI GL + ID L+KHVFN+L+WP L  +++
Sbjct: 110  FLITHCHLDHIYGAVINSAMFGPQN---PRTIVGLNYVIDTLKKHVFNNLLWPSL--DKA 164

Query: 550  RKLKLKCLNPKEVQKCTIFPWDVIPFKVHHGIGVKTGAPVYSTFYIFRDRKSKDCIIVCG 729
              +  + + P      T     ++PF V+HG     G  + S+ ++FR+  S    +  G
Sbjct: 165  GFINFQVVEPSMYTSLTT-TLSILPFPVNHGSSF--GQELKSSAFLFRNNLSDRYFLAFG 221

Query: 730  DVEQDXXXXXXXXXXXFWSYVAENIPLVHLKGILVECSCPLSSKPEQLYGHLSPIYLINE 909
            DVE D            W   +  I    L  IL+ECS P       L+GH  P +L+NE
Sbjct: 222  DVEPD-MVASEPLNIHIWRACSSLIAQRKLSHILIECSTP-DIPDTLLFGHFCPRHLVNE 279

Query: 910  LSNLNTLYNS-SKGLSGLNVIVTHVKSTPAK-RDPRLTILEELRFLAEERNL 1059
            L  L +L  S    +  L  ++TH+KS P +  +P   ILE+L  L+ + +L
Sbjct: 280  LCILQSLVQSYGVIMPTLTCLLTHLKSHPLQSANPADVILEQLESLSSKSSL 331


>gi|16122901|ref|NP_406214.1| putative 3',5'-cyclic-nucleotide phosphodiesterase [Yersinia pestis]
 gi|25289056|pir||AH0328 probable 3',5'-cyclic-nucleotide phosphodiesterase YPO2696 [imported]
            - Yersinia pestis (strain CO92)
 gi|15980675|emb|CAC92935.1| putative 3',5'-cyclic-nucleotide phosphodiesterase [Yersinia pestis
            CO92]
          Length = 343

 Score = 99.4 bits (246), Expect = 9e-20
 Identities = 76/304 (25%), Positives = 131/304 (43%), Gaps = 7/304 (2%)
 Frame = +1

Query: 145  EMLVQGRNENEGDDELVPSFYEHDREPIEFFIDSKLNIXXXXXXXXXXXXXXXXEHFESA 324
            E++  G +    D  L      +D +P+   +D+   +                +   + 
Sbjct: 38   EVVALGVDGGVSDGNLTSYLIRNDSQPLYLGLDAGSVLPGIARALEKGHFAAITDAMAAP 97

Query: 325  NTMKKTYEVFQGITDYYITHPHLDHISGLVVNSPSIYEQENSKKKTIWGLPHTIDVLQKH 504
             T ++ Y   Q I  Y+I+H HLDH+SGL++ SP      +  KKTI+    TIDVL+ +
Sbjct: 98   LT-RQGYIFRQSINSYFISHAHLDHVSGLIIGSP------DDSKKTIYASADTIDVLRNY 150

Query: 505  VFNDLIWPDLT----AERSRKLKLKCLNPKEVQKCTIFPWDVIPFKVHHGIGVKTGAPVY 672
             FN  +WP+ T      R    +++ + P +     +       + + H     +   + 
Sbjct: 151  YFNWRVWPNFTDSGSGARLGTYRMQVVRPAQSLSLGLTRLTGEMYPLSHDKSPSSMLLIS 210

Query: 673  ST--FYIFRDRKSKDCIIVCGDVEQDXXXXXXXXXXXFWSYVAENIPLVHLKGILVECSC 846
            S   F+ +      D      DVE+             W  +AE +    LKG+++E S 
Sbjct: 211  SNNEFFAYFGDTGPD------DVEK------SKNLDTVWRKLAEKVTQQQLKGMIIEVSY 258

Query: 847  PLSSKPEQLYGHLSPIYLINELSNLNTLYNSSKGLSGLNVIVTHVK-STPAKRDPRLTIL 1023
            P      +L+GH++P +L+ EL  L       + L GL V+++H+K S    +D R  IL
Sbjct: 259  PNDVADNKLFGHMTPTWLLKELKKLEQYSGEGQPLKGLPVVISHIKPSFQQGQDVRKLIL 318

Query: 1024 EELR 1035
             EL+
Sbjct: 319  SELQ 322


>gi|22125171|ref|NP_668594.1| hypothetical [Yersinia pestis KIM]
 gi|21958034|gb|AAM84845.1|AE013730_4 hypothetical [Yersinia pestis KIM]
          Length = 345

 Score = 99.4 bits (246), Expect = 9e-20
 Identities = 76/304 (25%), Positives = 131/304 (43%), Gaps = 7/304 (2%)
 Frame = +1

Query: 145  EMLVQGRNENEGDDELVPSFYEHDREPIEFFIDSKLNIXXXXXXXXXXXXXXXXEHFESA 324
            E++  G +    D  L      +D +P+   +D+   +                +   + 
Sbjct: 40   EVVALGVDGGVSDGNLTSYLIRNDSQPLYLGLDAGSVLPGIARALEKGHFAAITDAMAAP 99

Query: 325  NTMKKTYEVFQGITDYYITHPHLDHISGLVVNSPSIYEQENSKKKTIWGLPHTIDVLQKH 504
             T ++ Y   Q I  Y+I+H HLDH+SGL++ SP      +  KKTI+    TIDVL+ +
Sbjct: 100  LT-RQGYIFRQSINSYFISHAHLDHVSGLIIGSP------DDSKKTIYASADTIDVLRNY 152

Query: 505  VFNDLIWPDLT----AERSRKLKLKCLNPKEVQKCTIFPWDVIPFKVHHGIGVKTGAPVY 672
             FN  +WP+ T      R    +++ + P +     +       + + H     +   + 
Sbjct: 153  YFNWRVWPNFTDSGSGARLGTYRMQVVRPAQSLSLGLTRLTGEMYPLSHDKSPSSMLLIS 212

Query: 673  ST--FYIFRDRKSKDCIIVCGDVEQDXXXXXXXXXXXFWSYVAENIPLVHLKGILVECSC 846
            S   F+ +      D      DVE+             W  +AE +    LKG+++E S 
Sbjct: 213  SNNEFFAYFGDTGPD------DVEK------SKNLDTVWRKLAEKVTQQQLKGMIIEVSY 260

Query: 847  PLSSKPEQLYGHLSPIYLINELSNLNTLYNSSKGLSGLNVIVTHVK-STPAKRDPRLTIL 1023
            P      +L+GH++P +L+ EL  L       + L GL V+++H+K S    +D R  IL
Sbjct: 261  PNDVADNKLFGHMTPTWLLKELKKLEQYSGEGQPLKGLPVVISHIKPSFQQGQDVRKLIL 320

Query: 1024 EELR 1035
             EL+
Sbjct: 321  SELQ 324


>gi|6831520|sp|Q56686|CPDP_VIBFI 3',5'-CYCLIC-NUCLEOTIDE PHOSPHODIESTERASE PRECURSOR (PDEASE)
            (3':5'-CNP)
 gi|476787|pir||A40602 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) - Vibrio
            fischeri
 gi|388363|gb|AAA27513.1| cpdP
          Length = 330

 Score = 97.4 bits (241), Expect = 3e-19
 Identities = 74/245 (30%), Positives = 114/245 (46%), Gaps = 6/245 (2%)
 Frame = +1

Query: 316  ESANTMKKTYEVFQGITDYYITHPHLDHISGLVVNSPSIYEQENSKKKTIWGLPHTIDVL 495
            +S+   K  Y +   I  Y+I+H HLDH++GL+++SP      +  KK I+GL  T   L
Sbjct: 82   DSSPYTKVGYLLKDRIKGYFISHAHLDHVAGLIISSP------DDSKKPIYGLAATNKDL 135

Query: 496  QKHVFNDLIWPDLTAERSRKLKLKCLNPKEVQKCTIFP-----WDVIPFKVHHGIGVKTG 660
             K+ FN   WP+    +    KL   N  ++Q     P       V+   + H  G    
Sbjct: 136  MKNYFNWSAWPNF-GNKGEGFKLNKYNYVDLQPGVWSPVAETTMSVVSLPLSHSGG---- 190

Query: 661  APVYSTFYIFRDRKSKDCIIVCGDVEQDXXXXXXXXXXXFWSYVAENIPLVHLKGILVEC 840
                ST +I +D +  D     GD   D            WS +A  +    LKGI++E 
Sbjct: 191  ---QSTVFILKDSEG-DVFAYFGDTGPDEVEKSSAMRTA-WSVLAPFVKQGKLKGIIIEV 245

Query: 841  SCPLSSKPEQLYGHLSPIYLINELSNLNTLYNSSKGLSGLNVIVTHVK-STPAKRDPRLT 1017
            S    +  + L+GHL+P +L+ ELS L  + N    L  LNV ++H+K S     DP++ 
Sbjct: 246  SFTNETPDKSLFGHLTPNWLVKELSVLEDM-NGKGSLKDLNVAISHIKYSLKNSEDPKVI 304

Query: 1018 ILEEL 1032
            I ++L
Sbjct: 305  IKKQL 309


>gi|1168982|sp|P32782|CNA1_CANAL 3',5'-cyclic-nucleotide phosphodiesterase (PDEase) (3':5'-CNP)
 gi|7548341|gb|AAA34355.2| cyclic nucleotide phosphodiesterase [Candida albicans]
          Length = 426

 Score = 88.6 bits (218), Expect = 2e-16
 Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 9/184 (4%)
 Frame = +1

Query: 10  FEITILGANGGPTEYGTQCFILKPARTEDPELI---------AVDGGAGMYQLREMLVQG 162
           FEITILG++GGP E  T   +LKPA     ++I          +D G+GM +L E++ Q 
Sbjct: 3   FEITILGSSGGPLEGSTCSILLKPANISYHDIINDNLPDQVLCIDAGSGMGKLTEIIHQE 62

Query: 163 RNENEGDDELVPSFYEHDREPIEFFIDSKLNIXXXXXXXXXXXXXXXXEHFESANTMKKT 342
                     +   Y  D E + ++    + I                 +F+    +  T
Sbjct: 63  TTTKTSYCNFLQ--YYPDCETVSYYYHPNVTITTPFS------------NFQPGRPILHT 108

Query: 343 YEVFQGITDYYITHPHLDHISGLVVNSPSIYEQENSKKKTIWGLPHTIDVLQKHVFNDLI 522
             +F  + +Y I+H HLDH+  +V+NS      +N   K ++G  +TI+ +Q+H+FN  +
Sbjct: 109 QNIFNNLQNYLISHSHLDHVCSVVINSAGF--NKNMSNKILYGSHYTINAMQQHLFNGKV 166

Query: 523 WPDL 534
           WP++
Sbjct: 167 WPNM 170



 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 54/146 (36%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
 Frame = +1

Query: 715  IIVCGDVEQDXXXXXXXXXXXFWSYVAENIPLVHLKGILVECSCPLSSKPEQLYGHLSPI 894
            I+V GD E D            W  +A  I    LK I++ECS        +LYGHL+P 
Sbjct: 283  ILVFGDFESDLTSKLSRNLF-IWKSIASLILRNQLKAIVLECSNCKEIAANELYGHLTPK 341

Query: 895  YLINELSNL--------NTLYNSSKGLSGLNVIVTHVKSTPAK-------RDPRLTILEE 1029
             LI EL  L            ++ + L GLNVIV HVK   A         DPR  IL E
Sbjct: 342  LLIYELKQLEHECKQLDTATTSTEQPLLGLNVIVNHVKEPIADPNQESQLHDPRKRILAE 401

Query: 1030 LRFLAEERNLGDLRISIALEGHTLFL 1107
            L  L E   LG   ISIAL G ++ +
Sbjct: 402  LNKLNEIEKLG-CNISIALSGTSIIV 426


>gi|28918803|gb|EAA28472.1| hypothetical protein [Neurospora crassa]
          Length = 791

 Score = 80.1 bits (196), Expect = 6e-14
 Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 2/181 (1%)
 Frame = +1

Query: 13  EITILGANGGPTEYGTQCFILKP--ARTEDPELIAVDGGAGMYQLREMLVQGRNENEGDD 186
           ++ +LG+ GGP E     F+++P  A      +IAVD G  +  + ++L + +    G+D
Sbjct: 34  QVIVLGSGGGPLESNVTAFLVRPIAAGWRRGSVIAVDAGVHLSAIEQILAKTQPATLGED 93

Query: 187 ELVPSFYEHDREPIEFFIDSKLNIXXXXXXXXXXXXXXXXEHFESANTMKKTYEVFQGIT 366
           E     Y     P      + L +                    +A+ + +T      I 
Sbjct: 94  EEHALPYTLKTGPF-----AGLQVPMATSSA-------------NASFIHRTL-----ID 130

Query: 367 DYYITHPHLDHISGLVVNSPSIYEQENSKKKTIWGLPHTIDVLQKHVFNDLIWPDLTAER 546
            Y ITHPHLDHISG V+N+  +    +S+ K + GLP+TI   + H+FN++IWP+L+ E 
Sbjct: 131 TYLITHPHLDHISGFVINTAGL---GSSRPKKLAGLPNTIAAFKTHIFNNIIWPNLSDEN 187

Query: 547 S 549
           +
Sbjct: 188 N 188



 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 29/83 (34%), Positives = 40/83 (48%)
 Frame = +1

Query: 673 STFYIFRDRKSKDCIIVCGDVEQDXXXXXXXXXXXFWSYVAENIPLVHLKGILVECSCPL 852
           S+ Y  RD  +   II+ GDVE D            W   A  I    L  I +ECS   
Sbjct: 339 SSAYFIRDVTTGREIIIFGDVEPDSVSLSPRNRN-IWREAAPKIASGKLTAIFIECSFDD 397

Query: 853 SSKPEQLYGHLSPIYLINELSNL 921
           S   ++L+GHL+P Y++ EL+ L
Sbjct: 398 SQTDDRLFGHLTPRYIMEELTAL 420


>gi|1352097|sp|P12019|CN17_DICDI 3',5'-CYCLIC-NUCLEOTIDE PHOSPHODIESTERASE PRECURSOR (PDEASE)
            (3':5'-CNP)
 gi|695313|gb|AAA63168.1| cyclic nucleotide phosphodiesterase
 gi|862417|gb|AAA68447.1| cyclic nucleotide phosphodiesterase precursor (EC 3.1.4.17)
          Length = 452

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 70/294 (23%), Positives = 117/294 (39%), Gaps = 50/294 (17%)
 Frame = +1

Query: 361  ITDYYITHPHLDHISGLVVNSPSIYEQEN------------------------------- 447
            +  Y+I H HLDH+ GL++ SP  Y  +N                               
Sbjct: 163  VMSYFIGHSHLDHVGGLILVSPEDYLAKNWIDVQPPINNGIMGLIRKLGFKPTDFTSSSI 222

Query: 448  SKKKTIWGLPHTIDVLQKHVFNDLIWPDLTA-ERSRKLKLKC--------LNPKEVQKCT 600
             +KKTI GLP TI+ +  ++FN+ +WP+L +  R +   L          L P      +
Sbjct: 223  LQKKTIMGLPSTINSISTNLFNNQVWPNLPSFGRYQYFSLASGIEYPFTELVPYNATTMS 282

Query: 601  I----FPWD--VIPFKVHHGIGVKTGAPVYSTFYIFRDRKSKDCIIVCGDVEQDXXXXXX 762
            +    FP+   V PF++ H         + ST ++F D  S + I    D          
Sbjct: 283  LVANEFPFSVKVKPFELCHD-------NLISTSFLFTDSISGEQIAFFSDTGVPSSVACD 335

Query: 763  XXXXXFWSYVAENIPLVHLKGILVECSCPLSSKPEQLYGHLSPIYLINELSNL--NTLYN 936
                 +   V + I +  LK I +E S P ++    ++GHL P  ++  +  L   ++  
Sbjct: 336  WEGKIY--AVWKQIKIDKLKAIYIETSFPNNTPDSAMFGHLRPRDVMKLMDQLLVQSIQT 393

Query: 937  S--SKGLSGLNVIVTHVKSTPAKRDPRLTILEELRFLAEERNLGDLRISIALEG 1092
            S     L  + +I+ H+K   A+     T    +    +E N   +RI I  +G
Sbjct: 394  SPPMTNLKHVKLIIEHIKPQVAEDPNGWTTQRVIYQQLKEANNNGVRIIIPNQG 447


>gi|84080|pir||A25346 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) precursor -
            slime mold (Dictyostelium discoideum)
          Length = 452

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 70/294 (23%), Positives = 117/294 (39%), Gaps = 50/294 (17%)
 Frame = +1

Query: 361  ITDYYITHPHLDHISGLVVNSPSIYEQEN------------------------------- 447
            +  Y+I H HLDH+ GL++ SP  Y  +N                               
Sbjct: 163  VMSYFIGHSHLDHVGGLILVSPEDYLAKNWIDVQPPINNGIMGLIRKLGFKPTDFTSSSI 222

Query: 448  SKKKTIWGLPHTIDVLQKHVFNDLIWPDLTA-ERSRKLKLKC--------LNPKEVQKCT 600
             +KKTI GLP TI+ +  ++FN+ +WP+L +  R +   L          L P      +
Sbjct: 223  LQKKTIMGLPSTINSISTNLFNNQVWPNLPSFGRYQYFSLASGIEYPFTELVPYNATTMS 282

Query: 601  I----FPWD--VIPFKVHHGIGVKTGAPVYSTFYIFRDRKSKDCIIVCGDVEQDXXXXXX 762
            +    FP+   V PF++ H         + ST ++F D  S + I    D          
Sbjct: 283  LVANEFPFSVKVKPFELCHD-------NLISTSFLFTDSISGEQIAFFSDTGVPSSVACD 335

Query: 763  XXXXXFWSYVAENIPLVHLKGILVECSCPLSSKPEQLYGHLSPIYLINELSNL--NTLYN 936
                 +   V + I +  LK I +E S P ++    ++GHL P  ++  +  L   ++  
Sbjct: 336  WEGKIY--AVWKQIKIDKLKAIYIETSFPNNTPDSAMFGHLRPRDVMKLMDQLLVQSIQT 393

Query: 937  S--SKGLSGLNVIVTHVKSTPAKRDPRLTILEELRFLAEERNLGDLRISIALEG 1092
            S     L  + +I+ H+K   A+     T    +    +E N   +RI I  +G
Sbjct: 394  SPPMTNLKHVKLIIEHIKPQVAEDPNGWTTQRVIYQQLKEANNNGVRIIIPNQG 447


>gi|22956071|gb|ZP_00003872.1| hypothetical protein [Nitrosomonas europaea]
          Length = 234

 Score = 44.7 bits (104), Expect = 0.003
 Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
 Frame = +1

Query: 361 ITDYYITHPHLDHISGLVVNSPSIYEQENSKKKT---IWGLPHTIDVLQKHVFNDLIWPD 531
           I   ++TH HLDHI+ +    P + +   S +     +  LP T++ LQKH+FN  +WPD
Sbjct: 26  IDHVFVTHSHLDHIAFI----PFLVDTTGSLRDRPLIVHALPATLECLQKHIFNWHVWPD 81

Query: 532 LT 537
            +
Sbjct: 82  FS 83


>gi|8469145|sp|Q45739|C1BB_BACTU PESTICIDIAL CRYSTAL PROTEIN CRY1BB (INSECTICIDAL DELTA-ENDOTOXIN
            CRYIB(B)) (CRYSTALINE ENTOMOCIDAL PROTOXIN) (140 KDA
            CRYSTAL PROTEIN)
 gi|474894|gb|AAA22344.1| crystal protein
          Length = 1229

 Score = 33.5 bits (75), Expect = 6.0
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
 Frame = +1

Query: 394  DHISGLVVNSPSIYEQENSKKK-------TIWGLPHTIDVLQKHVFNDLIWPDLTAERSR 552
            + + G ++ + S+Y+  N  K        T W +   +DV Q H  +DL+ P+  AE S+
Sbjct: 1010 EELEGHIITAMSLYDARNVVKNGDFNNGLTCWNVKGHVDVQQSHHRSDLVIPEWEAEVSQ 1069

Query: 553  KLKL 564
             +++
Sbjct: 1070 AVRV 1073


>gi|21244987|ref|NP_644569.1| glycerol-3-phosphate acyltransferase [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|23821948|sp|Q8PES0|PLSB_XANAC Glycerol-3-phosphate acyltransferase (GPAT)
 gi|21110709|gb|AAM39105.1| glycerol-3-phosphate acyltransferase [Xanthomonas axonopodis pv.
           citri str. 306]
          Length = 885

 Score = 33.5 bits (75), Expect = 6.0
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -2

Query: 128 PAPPSTAINSGSSVLAGLSIKHCVPYSVGPPLAPSIVISNT 6
           P+PPSTA     +  A L +   VP +V P +APS+  + +
Sbjct: 14  PSPPSTAAADTGATAAALPLAEPVPPAVAPSIAPSVAAARS 54


>gi|1200002|emb|CAA65003.1| cry1Ba2 [Bacillus thuringiensis]
 gi|13959051|gb|AAK51084.1|AF363025_1 delta-endotoxin Cry1Ba2 [Bacillus thuringiensis serovar entomocidus]
          Length = 1228

 Score = 33.1 bits (74), Expect = 7.9
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
 Frame = +1

Query: 394  DHISGLVVNSPSIYEQENSKKK-------TIWGLPHTIDVLQKHVFNDLIWPDLTAERSR 552
            + + G ++ + S+Y+  N  K        T W +   +DV Q H  +DL+ P+  AE S+
Sbjct: 1005 EELEGHIITAISLYDARNVVKNGDFNNGLTCWNVKGHVDVQQSHHRSDLVIPEWEAEVSQ 1064

Query: 553  KLKL 564
             +++
Sbjct: 1065 AVRV 1068


>gi|14486714|gb|AAK63251.1|AF368257_1 Cry1Ba [Bacillus thuringiensis]
          Length = 1228

 Score = 33.1 bits (74), Expect = 7.9
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
 Frame = +1

Query: 394  DHISGLVVNSPSIYEQENSKKK-------TIWGLPHTIDVLQKHVFNDLIWPDLTAERSR 552
            + + G ++ + S+Y+  N  K        T W +   +DV Q H  +DL+ P+  AE S+
Sbjct: 1005 EELEGHIITAISLYDARNVVKNGDFNNGLTCWNVKGHVDVQQSHHRSDLVIPEWEAEVSQ 1064

Query: 553  KLKL 564
             +++
Sbjct: 1065 AVRV 1068


>gi|1345842|sp|P05517|C1BA_BACTK PESTICIDIAL CRYSTAL PROTEIN CRY1BA (INSECTICIDAL DELTA-ENDOTOXIN
            CRYIB(A)) (CRYSTALINE ENTOMOCIDAL PROTOXIN) (140 KDA
            CRYSTAL PROTEIN)
 gi|80480|pir||S00873 parasporal crystal protein cryBa1 - Bacillus thuringiensis subsp.
            thuringiensis
 gi|580949|emb|CAA29898.1| delta-endotoxin (AA 1-1228) [Bacillus thuringiensis]
          Length = 1228

 Score = 33.1 bits (74), Expect = 7.9
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
 Frame = +1

Query: 394  DHISGLVVNSPSIYEQENSKKK-------TIWGLPHTIDVLQKHVFNDLIWPDLTAERSR 552
            + + G ++ + S+Y+  N  K        T W +   +DV Q H  +DL+ P+  AE S+
Sbjct: 1005 EELEGHIITAISLYDARNVVKNGDFNNGLTCWNVKGHVDVQQSHHRSDLVIPEWEAEVSQ 1064

Query: 553  KLKL 564
             +++
Sbjct: 1065 AVRV 1068


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 19, 2003 11:08 PM
  Number of letters in database: 441,946,756
  Number of sequences in database:  1,375,764
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 871,698,105
Number of Sequences: 1375764
Number of extensions: 18216023
Number of successful extensions: 48349
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 46605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48332
length of database: 441,946,756
effective HSP length: 125
effective length of database: 269,976,256
effective search space used: 65874206464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)