MedBlast(0.8) Results
| Hit | Evalue | SeqType | References |
| Z28015 | 0.0 | N | |
| X74152 | 0.0 | N | |
| X55384 | 0.0 | N | |
| NP_012910 | 0.0 | P | |
| P25502 | 0.0 | P | |
| A39792 | 0.0 | P | |
| CAA39055 | 0.0 | P | |
| CAA52267 | 0.0 | P | |
| CAA81850 | 0.0 | P | |
| 1AJY | 7e-34 | P | |
| 1AJY | 7e-34 | P | |
| 1ZME | 7e-34 | P | |
| 1ZME | 7e-34 | P | |
| NP_593605 | 9e-21 | P | |
| T38690 | 9e-21 | P | |
| CAB16735 | 9e-21 | P |
References Summary:
References Summary:
BLASTN 2.2.5 [Nov-16-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1048249504-07225-8005 Query= ORFN:YKL015W PUT3 SGDID:S0001498, Chr XI from 408182-411121 (2940 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS, or phase 0, 1 or 2 HTGS sequences) 1,707,549 sequences; 7,931,913,529 total letters Score E Sequences producing significant alignments: (bits) Value gi|486002|emb|Z28015.1|SCYKL015W S.cerevisiae chromosome XI read... 5697 0.0 gi|450363|emb|X74152.1|SCPUKGA S.cerevisiae sequence for orfs ho... 5697 0.0 gi|4251|emb|X55384.1|SCPUT3 S.cerevisiae PUT3 gene for proline u... 5689 0.0 gi|23497662|gb|AE014826.1| Plasmodium falciparum 3D7 chromosome ... 50 0.020 gi|10334498|emb|AJ299062.1|CAR299062 Cicer arietinum partial mRN... 50 0.020 gi|500825|gb|U10556.1|YSCH9205 Saccharomyces cerevisiae chromoso... 50 0.020 gi|967212|gb|U28158.1|SCU28158 Saccharomyces cerevisiae Ifs1p (I... 50 0.020 gi|555938|gb|U14974.1|SCU14974 Saccharomyces cerevisiae Nmd2p (N... 50 0.020 gi|806703|gb|U12137.1|SCU12137 Saccharomyces cerevisiae Upf2p (U... 50 0.020 gi|28829247|gb|AC116986.2| Dictyostelium discoideum chromosome 2... 48 0.078 gi|28829751|gb|AC116305.2| Dictyostelium discoideum chromosome 2... 48 0.078 gi|28570302|gb|AC091869.4| Homo sapiens chromosome 5 clone CTD-2... 48 0.078 gi|23496588|gb|AE014845.1| Plasmodium falciparum 3D7 chromosome ... 48 0.078 gi|23496531|gb|AE014844.1| Plasmodium falciparum 3D7 chromosome ... 48 0.078 gi|24497617|ref|NM_014109.2| Homo sapiens PRO2000 protein (PRO20... 48 0.078 gi|25167092|gb|AF267168.3| Homo sapiens chromosome 8 clone RP11-... 48 0.078 gi|25167091|gb|AF254981.4| Homo sapiens chromosome 8 clone RP11-... 48 0.078 gi|25167090|gb|AC133330.2| Homo sapiens chromosome 8 clone RP11-... 48 0.078 gi|12408709|gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromo... 48 0.078 gi|23495098|gb|AE014833.1| Plasmodium falciparum 3D7 chromosome ... 48 0.078 gi|22330781|ref|NM_110973.2| Arabidopsis thaliana chromosome 3 ... 48 0.078 gi|19482348|gb|AC021305.9| Homo sapiens chromosome 8, clone RP11... 48 0.078 gi|18854958|gb|AC091873.2| Homo sapiens chromosome 5 clone CTD-2... 48 0.078 gi|16798365|gb|AF426254.1|AF426254 Arabidopsis thaliana WRKY tra... 48 0.078 gi|13938012|gb|BC007123.1|BC007123 Homo sapiens, Similar to RIKE... 48 0.078 gi|63704|emb|X17200.1|GGNPNO38 Chicken mRNA for nucleolar protei... 48 0.078 gi|7705211|gb|AC011890.4|AC011890 Homo sapiens PAC clone RP4-655... 48 0.078 gi|21734301|emb|AL833653.1|HSM804966 Homo sapiens mRNA; cDNA DKF... 48 0.078 gi|20196613|emb|AL645547.14| Mouse DNA sequence from clone RP23-... 48 0.078 gi|21907955|dbj|AP004939.1| Lotus japonicus genomic DNA, chromos... 48 0.078 gi|21756798|dbj|AK097133.1| Homo sapiens cDNA FLJ39814 fis, clon... 48 0.078 gi|28973838|gb|AC009364.9| Homo sapiens chromosome 7 clone RP11-... 46 0.31 gi|28828986|gb|AC116982.2| Dictyostelium discoideum chromosome 2... 46 0.31 gi|28828496|gb|AC116956.2| Dictyostelium discoideum chromosome 2... 46 0.31 gi|28828407|gb|AC116330.2| Dictyostelium discoideum chromosome 2... 46 0.31 gi|25025070|ref|XM_206987.1| Mus musculus suppressor of Ty 6 hom... 46 0.31 gi|25025823|ref|XM_203127.1| Mus musculus suppressor of Ty 6 hom... 46 0.31 gi|22945392|gb|AE003583.3| Drosophila melanogaster chromosome 2L... 46 0.31 gi|27673592|ref|XM_239258.1| Rattus norvegicus LOC303281 (LOC303... 46 0.31 gi|27476109|gb|AC130454.2| Homo sapiens chromosome 16 clone CTA-... 46 0.31 gi|24418074|gb|AC106818.2| Homo sapiens chromosome 5 clone RP11-... 46 0.31 gi|23953894|gb|AY159040.1| Dictyostelium discoideum LvsD (lvsD) ... 46 0.31 gi|23497422|gb|AE014822.1| Plasmodium falciparum 3D7 chromosome ... 46 0.31 gi|23496321|gb|AE014842.1| Plasmodium falciparum 3D7 chromosome ... 46 0.31 gi|23494991|gb|AE014831.1| Plasmodium falciparum 3D7 chromosome ... 46 0.31 gi|22330141|ref|NM_103877.2| Arabidopsis thaliana chromosome 1 ... 46 0.31 gi|18414993|ref|NM_117904.1| Arabidopsis thaliana chromosome 4 ... 46 0.31 gi|22138633|gb|AC121808.2| Mus musculus chromosome 13 clone RP23... 46 0.31 gi|21844674|gb|AC121783.2| Mus musculus clone RP23-370I9, comple... 46 0.31 gi|21405987|gb|AY087263.1| Arabidopsis thaliana clone 33385 mRNA... 46 0.31 gi|21592278|gb|AC114751.4| Homo sapiens BAC clone RP11-252D11 fr... 46 0.31 gi|20386035|gb|AF446007.1| Dictyostelium discoideum MEK1 interac... 46 0.31 gi|12006700|gb|AF285074.1| Lepidosperma aff. filiforme Morris 80... 46 0.31 gi|12006698|gb|AF285072.1| Cladium californicum tRNA-Leu, partia... 46 0.31 gi|20070168|ref|NM_002520.2| Homo sapiens nucleophosmin (nucleol... 46 0.31 gi|17570981|ref|NG_000653.1| Drosophila melanogaster (dpp) on c... 46 0.31 gi|18767433|gb|AC108102.2| Homo sapiens chromosome 5 clone RP11-... 46 0.31 gi|18314407|gb|BC021983.1|BC021983 Homo sapiens, nucleophosmin (... 46 0.31 gi|18203875|gb|BC021668.1|BC021668 Homo sapiens, nucleophosmin (... 46 0.31 gi|6678182|ref|NM_009297.1| Mus musculus suppressor of Ty 6 homo... 46 0.31 gi|18042838|gb|BC020467.1|BC020467 Homo sapiens, clone IMAGE:387... 46 0.31 gi|17488742|gb|AC068700.5| Homo sapiens chromosome 8, clone RP11... 46 0.31 gi|28564321|emb|BX000366.6| Zebrafish DNA sequence from clone CH... 46 0.31 gi|16877098|gb|BC016824.1|BC016824 Homo sapiens, nucleophosmin (... 46 0.31 gi|16876991|gb|BC016768.1|BC016768 Homo sapiens, nucleophosmin (... 46 0.31 gi|16876871|gb|BC016716.1|BC016716 Homo sapiens, nucleophosmin (... 46 0.31 gi|14589720|gb|AC010683.10| Homo sapiens BAC clone RP11-364M6 fr... 46 0.31 gi|16307089|gb|BC009623.1|BC009623 Homo sapiens, Similar to nucl... 46 0.31 gi|15680057|gb|BC014349.1|BC014349 Homo sapiens, nucleophosmin (... 46 0.31 gi|15451489|gb|AC092189.2| Drosophila melanogaster, chromosome 2... 46 0.31 gi|23505209|emb|AL929359.1|PFA929359 Plasmodium falciparum strai... 46 0.31 gi|15214851|gb|BC012566.1|BC012566 Homo sapiens, nucleophosmin (... 46 0.31 gi|27801664|emb|AL928586.10| Mouse DNA sequence from clone RP23-... 46 0.31 gi|14250151|gb|BC008495.1|BC008495 Homo sapiens, nucleophosmin (... 46 0.31 gi|13277531|gb|BC003670.1|BC003670 Homo sapiens, nucleophosmin (... 46 0.31 gi|12803184|gb|BC002398.1|BC002398 Homo sapiens, nucleophosmin (... 46 0.31 gi|14550288|gb|AC092186.1|AC092186 Drosophila melanogaster, chro... 46 0.31 gi|24394996|emb|AL732466.7| Mouse DNA sequence from clone RP23-1... 46 0.31 gi|24366485|emb|AL683804.15| Mouse DNA sequence from clone RP23-... 46 0.31 gi|11072070|gb|AC074110.5|AC074110 Arabidopsis thaliana chromoso... 46 0.31 gi|12323591|gb|AC079674.4|AC079674 Arabidopsis thaliana chromoso... 46 0.31 gi|5738375|emb|AL021889.2|ATT6K21 Arabidopsis thaliana DNA chrom... 46 0.31 gi|7268521|emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chr... 46 0.31 gi|9558608|gb|AC018643.3|AC018643 Human Chromosome 7 clone RP11-... 46 0.31 gi|4753231|gb|AC006380.2|AC006380 Homo sapiens BAC clone RP11-46... 46 0.31 gi|32029|emb|X16934.1|HSHB23 Human hB23 gene for B23 nucleophosmin 46 0.31 gi|17065932|emb|AL121875.10|HSBA51C14 Human DNA sequence from cl... 46 0.31 gi|15962708|emb|AL162831.6|CNS01RI2 Human chromosome 14 DNA sequ... 46 0.31 gi|13992189|emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequ... 46 0.31 gi|14270149|emb|AL390834.24| Human DNA sequence from clone RP11-... 46 0.31 gi|14575338|emb|AL583838.7| Human DNA sequence from clone RP11-5... 46 0.31 gi|7533189|gb|AF245277.1|AF245277 Dictyostelium discoideum kines... 46 0.31 gi|23557857|emb|AL928640.3| Mouse DNA sequence from clone RP23-3... 46 0.31 gi|22202638|dbj|AB079663.1| Dictyostelium discoideum mhkC mRNA f... 46 0.31 gi|3687282|gb|AC004807.1|AC004807 Mus musculus chromosome 11, cl... 46 0.31 gi|3513297|gb|AC005597.1|AC005597 Homo sapiens chromosome 19, co... 46 0.31 gi|3420748|gb|AF079447.1|AF079447 Dictyostelium discoideum myosi... 46 0.31 gi|3168606|gb|AC004369.1|AC004369 Drosophila melanogaster DNA se... 46 0.31 gi|3004881|gb|AF030304.1|AF030304 Arabidopsis thaliana zinc fing... 46 0.31 gi|4777|emb|X54378.1|SCUSO1 S.cerevisiae gene for Uso1 protein, ... 46 0.31 ALIGNMENTS >gi|486002|emb|Z28015.1|SCYKL015W S.cerevisiae chromosome XI reading frame ORF YKL015w Length = 3629 Score = 5697 bits (2874), Expect = 0.0 Identities = 2918/2940 (99%) Strand = Plus / Plus Query: 1 atggtgaccgaccaaggcagtaggcattcgatacaatctaagcaaccagcctacgttaat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 atggtgaccgaccaaggcagtaggcattcgatacaatctaagcaaccagcctacgttaat 614 Query: 61 aaacaaccgcaaaaaaggcagcagagatcttctgtcgcatgcctttcttgtaggaaacgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 615 aaacaaccgcaaaaaaggcagcagagatcttctgtcgcatgcctttcttgtaggaaacgt 674 Query: 121 catataaaatgtcctggtggtaacccttgccaaaaatgtgttacgagcaatgccatatgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 catataaaatgtcctggtggtaacccttgccaaaaatgtgttacgagcaatgccatatgt 734 Query: 181 gagtacttggagccgtcnnnnnnnnttgttgtgtcgacaaagtatctgcaacaactgcaa 240 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 735 gagtacttggagccgtcaaaaaaaattgttgtgtcgacaaagtatctgcaacaactgcaa 794 Query: 241 aaagacttgaatgataaaactgaagagaataaccgcctgaaagctttgctcttggagaga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 aaagacttgaatgataaaactgaagagaataaccgcctgaaagctttgctcttggagaga 854 Query: 301 ccagtgagtgtacgtggtaaggataacagcgatgatgacgagaggcatataaacaatgca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 ccagtgagtgtacgtggtaaggataacagcgatgatgacgagaggcatataaacaatgca 914 Query: 361 ccctcaagtgacacattggaagtatccagcgctccggcggctcctatatttgacctcatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 915 ccctcaagtgacacattggaagtatccagcgctccggcggctcctatatttgacctcatg 974 Query: 421 tccaatagtaacactgcgtccgataacgataacgacgatgacaacagcaacagaatcaca 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 tccaatagtaacactgcgtccgataacgataacgacgatgacaacagcaacagaatcaca 1034 Query: 481 aataataggagctatgatcatagtttggaaaaatactacaaaaaggccatcagcatcttt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1035 aataataggagctatgatcatagtttggaaaaatactacaaaaaggccatcagcatcttt 1094 Query: 541 aaacaaccagctaatgctaatggcgaaaatggcaacggtgccaatggtcatgaggatgat 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1095 aaacaaccagctaatgctaatggcgaaaatggcaacggtgccaatggtcatgaggatgat 1154 Query: 601 gatgaagatgatgaagaaatatcaacaaattttgctcaaagaagtggtaggctcatagaa 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1155 gatgaagatgatgaagaaatatcaacaaattttgctcaaagaagtggtaggctcatagaa 1214 Query: 661 tctcacaatggattccattattttgttggatcttcttcaatgacattatttgggttagaa 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1215 tctcacaatggattccattattttgttggatcttcttcaatgacattatttgggttagaa 1274 Query: 721 attcaatctttggttacaaagtatatttcggtcaagaattttcgacctttgccaataaac 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1275 attcaatctttggttacaaagtatatttcggtcaagaattttcgacctttgccaataaac 1334 Query: 781 accaaaaacaagattttaaattcaaacctgaacccggctataagttcttttatcaattca 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1335 accaaaaacaagattttaaattcaaacctgaacccggctataagttcttttatcaattca 1394 Query: 841 aacaactatcttttctcgtcctataattttttgaaccctatatcgactattgtcaactta 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1395 aacaactatcttttctcgtcctataattttttgaaccctatatcgactattgtcaactta 1454 Query: 901 aactcaatcaacgataatttatctccattgatgtttaagataattttgaaaagcgatacg 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1455 aactcaatcaacgataatttatctccattgatgtttaagataattttgaaaagcgatacg 1514 Query: 961 gatggtagtagtggccaggaagaggtaatacagtttcagttgccttcgtataattacaca 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1515 gatggtagtagtggccaggaagaggtaatacagtttcagttgccttcgtataattacaca 1574 Query: 1021 aaactattaattgactgctttataaattataacgatggttgtttttactttttcaacgaa 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1575 aaactattaattgactgctttataaattataacgatggttgtttttactttttcaacgaa 1634 Query: 1081 ggcctggttaaatgtggcattaacaaattgtacttggaaaataaatggctatactatgat 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1635 ggcctggttaaatgtggcattaacaaattgtacttggaaaataaatggctatactatgat 1694 Query: 1141 aataccaaaaaagctttggacaatgagaatgatccaattttacaagctgtttggttttgc 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1695 aataccaaaaaagctttggacaatgagaatgatccaattttacaagctgtttggttttgc 1754 Query: 1201 aaaattttgttaattttagcagtaggtgaaatgtatctgggttccatcaataatgaaatg 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1755 aaaattttgttaattttagcagtaggtgaaatgtatctgggttccatcaataatgaaatg 1814 Query: 1261 ttgaagaattattctaatcagccaaaattgcccggttcaaaattttttcaaatgggttct 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1815 ttgaagaattattctaatcagccaaaattgcccggttcaaaattttttcaaatgggttct 1874 Query: 1321 aaaatttttaattgtttgttctcaagtgaaagattagaaaatgtgactaagaaaggcggt 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1875 aaaatttttaattgtttgttctcaagtgaaagattagaaaatgtgactaagaaaggcggt 1934 Query: 1381 attgaagtcctgttgttatacgcgttcttcttacaggtggctgattacactttagcctct 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1935 attgaagtcctgttgttatacgcgttcttcttacaggtggctgattacactttagcctct 1994 Query: 1441 tatttttacttcggtcaagccctaaggacgtgcttaattctaggcttacatgttgattct 1500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1995 tatttttacttcggtcaagccctaaggacgtgcttaattctaggcttacatgttgattct 2054 Query: 1501 caaagcgacactctatccaggtatgaaatcgagcatcataggagactttggtggacagtt 1560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2055 caaagcgacactctatccaggtatgaaatcgagcatcataggagactttggtggacagtt 2114 Query: 1561 tacatgtttgaacgaatgcttagctcaaaagctgggttaccattaagtttcactgattat 1620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2115 tacatgtttgaacgaatgcttagctcaaaagctgggttaccattaagtttcactgattat 2174 Query: 1621 acaatctctacagcactgccagcggatattgatgatgaaactatcgaagagaaaaatagt 1680 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2175 acaatctctacagcactgccagcggatattgatgatgaaactatcgaagagaaaaatagt 2234 Query: 1681 cactatgttttcagaaaggcagaattgatttctaactgcgttactattgtgaaaatcaat 1740 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2235 cactatgttttcagaaaggcagaattgatttctaactgcgttactattgtgaaaatcaat 2294 Query: 1741 gcacaaattttgagcaaattatatcaaaggcaacctgagacaaacatcataattactttg 1800 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2295 gcacaaattttgagcaaattatatcaaaggcaacctgagacaaacatcataattactttg 2354 Query: 1801 aaagttgtcatcaagcagttgttggaatggaggaacaatttgtccgattccttacaggtg 1860 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2355 aaagttgtcatcaagcagttgttggaatggaggaacaatttgtccgattccttacaggtg 2414 Query: 1861 gattttacgcaaaaggatgaagatttcaaaatatcgagattgtcaaccaatatgtttacg 1920 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2415 gattttacgcaaaaggatgaagatttcaaaatatcgagattgtcaaccaatatgtttacg 2474 Query: 1921 gaatattttcaaggaataaacttggccgtgagacctttattatttcattttgcatccatt 1980 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2475 gaatattttcaaggaataaacttggccgtgagacctttattatttcattttgcatccatt 2534 Query: 1981 caattgaaaaggttcaaaacgagcaatactttcgtcaacttacaaaactattctgccaca 2040 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2535 caattgaaaaggttcaaaacgagcaatactttcgtcaacttacaaaactattctgccaca 2594 Query: 2041 atatcttccttattaacatgttctttgcatgcttctgtgaatactattaggtctctgtgg 2100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2595 atatcttccttattaacatgttctttgcatgcttctgtgaatactattaggtctctgtgg 2654 Query: 2101 agtttattacagaatagtatgcttgctatgtttagttatatggacagagagtatcttttt 2160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2655 agtttattacagaatagtatgcttgctatgtttagttatatggacagagagtatcttttt 2714 Query: 2161 acttcttcttgtactttattactattcaacactgcttttggtattcatgaacaaacacta 2220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2715 acttcttcttgtactttattactattcaacactgcttttggtattcatgaacaaacacta 2774 Query: 2221 tatcatttggatcattctctggaaattttcacacaaatgagaaacttaggcaacattcca 2280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2775 tatcatttggatcattctctggaaattttcacacaaatgagaaacttaggcaacattcca 2834 Query: 2281 gcaggcttaagaagagcacaattattaacattaatggcaaatttggatttccacggcata 2340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2835 gcaggcttaagaagagcacaattattaacattaatggcaaatttggatttccacggcata 2894 Query: 2341 atgaatgacttgattactaaatataacgatattttgaaatttgattctatgaattgtgaa 2400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2895 atgaatgacttgattactaaatataacgatattttgaaatttgattctatgaattgtgaa 2954 Query: 2401 aacgataacatagtagaagatagcaatgaacccaaaagagaaaccgaaaagtgtaaacct 2460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2955 aacgataacatagtagaagatagcaatgaacccaaaagagaaaccgaaaagtgtaaacct 3014 Query: 2461 cacaaagatggcgatcgcattgacccttcaattatagactgtgataaatcaaacaccaat 2520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3015 cacaaagatggcgatcgcattgacccttcaattatagactgtgataaatcaaacaccaat 3074 Query: 2521 acaaatatgatcaagaacgaatctatatcgaacattgttagcatacttccggaaggcgcg 2580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3075 acaaatatgatcaagaacgaatctatatcgaacattgttagcatacttccggaaggcgcg 3134 Query: 2581 aaaccaacgctgactgattatagtaatggtaataatgatgttaatgatattaacgtcaat 2640 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3135 aaaccaacgctgactgattatagtaatggtaataatgatgttaatgatattaacgtcaat 3194 Query: 2641 aactcggaaccttctacnnnnnnngatatcataactgcgagcttggaaaattcataccaa 2700 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3195 aactcggaaccttctactttttttgatatcataactgcgagcttggaaaattcataccaa 3254 Query: 2701 accacgctaactgaaaagggctctcaggtgatggnnnnnnncatggatcagttggattcc 2760 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 3255 accacgctaactgaaaagggctctcaggtgatggaaaaaaacatggatcagttggattcc 3314 Query: 2761 gttcataatctaaatgatgacgatttacaacaattgttggaggatttaggcaatattgat 2820 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3315 gttcataatctaaatgatgacgatttacaacaattgttggaggatttaggcaatattgat 3374 Query: 2821 cattccgatgaaaaactttggaaggaaatcactgatcaagcaatgtggctgggaaatact 2880 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3375 cattccgatgaaaaactttggaaggaaatcactgatcaagcaatgtggctgggaaatact 3434 Query: 2881 atggatccaactgcagctgctggtagtgaaattgactttactgattatttaggaccataa 2940 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3435 atggatccaactgcagctgctggtagtgaaattgactttactgattatttaggaccataa 3494 >gi|450363|emb|X74152.1|SCPUKGA S.cerevisiae sequence for orfs homologous to ATP synthase D subunit, putative GTP-binding protein and PTU3 gene Length = 13194 Score = 5697 bits (2874), Expect = 0.0 Identities = 2918/2940 (99%) Strand = Plus / Minus Query: 1 atggtgaccgaccaaggcagtaggcattcgatacaatctaagcaaccagcctacgttaat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9069 atggtgaccgaccaaggcagtaggcattcgatacaatctaagcaaccagcctacgttaat 9010 Query: 61 aaacaaccgcaaaaaaggcagcagagatcttctgtcgcatgcctttcttgtaggaaacgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9009 aaacaaccgcaaaaaaggcagcagagatcttctgtcgcatgcctttcttgtaggaaacgt 8950 Query: 121 catataaaatgtcctggtggtaacccttgccaaaaatgtgttacgagcaatgccatatgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8949 catataaaatgtcctggtggtaacccttgccaaaaatgtgttacgagcaatgccatatgt 8890 Query: 181 gagtacttggagccgtcnnnnnnnnttgttgtgtcgacaaagtatctgcaacaactgcaa 240 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 8889 gagtacttggagccgtcaaaaaaaattgttgtgtcgacaaagtatctgcaacaactgcaa 8830 Query: 241 aaagacttgaatgataaaactgaagagaataaccgcctgaaagctttgctcttggagaga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8829 aaagacttgaatgataaaactgaagagaataaccgcctgaaagctttgctcttggagaga 8770 Query: 301 ccagtgagtgtacgtggtaaggataacagcgatgatgacgagaggcatataaacaatgca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8769 ccagtgagtgtacgtggtaaggataacagcgatgatgacgagaggcatataaacaatgca 8710 Query: 361 ccctcaagtgacacattggaagtatccagcgctccggcggctcctatatttgacctcatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8709 ccctcaagtgacacattggaagtatccagcgctccggcggctcctatatttgacctcatg 8650 Query: 421 tccaatagtaacactgcgtccgataacgataacgacgatgacaacagcaacagaatcaca 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8649 tccaatagtaacactgcgtccgataacgataacgacgatgacaacagcaacagaatcaca 8590 Query: 481 aataataggagctatgatcatagtttggaaaaatactacaaaaaggccatcagcatcttt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8589 aataataggagctatgatcatagtttggaaaaatactacaaaaaggccatcagcatcttt 8530 Query: 541 aaacaaccagctaatgctaatggcgaaaatggcaacggtgccaatggtcatgaggatgat 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8529 aaacaaccagctaatgctaatggcgaaaatggcaacggtgccaatggtcatgaggatgat 8470 Query: 601 gatgaagatgatgaagaaatatcaacaaattttgctcaaagaagtggtaggctcatagaa 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8469 gatgaagatgatgaagaaatatcaacaaattttgctcaaagaagtggtaggctcatagaa 8410 Query: 661 tctcacaatggattccattattttgttggatcttcttcaatgacattatttgggttagaa 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8409 tctcacaatggattccattattttgttggatcttcttcaatgacattatttgggttagaa 8350 Query: 721 attcaatctttggttacaaagtatatttcggtcaagaattttcgacctttgccaataaac 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8349 attcaatctttggttacaaagtatatttcggtcaagaattttcgacctttgccaataaac 8290 Query: 781 accaaaaacaagattttaaattcaaacctgaacccggctataagttcttttatcaattca 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8289 accaaaaacaagattttaaattcaaacctgaacccggctataagttcttttatcaattca 8230 Query: 841 aacaactatcttttctcgtcctataattttttgaaccctatatcgactattgtcaactta 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8229 aacaactatcttttctcgtcctataattttttgaaccctatatcgactattgtcaactta 8170 Query: 901 aactcaatcaacgataatttatctccattgatgtttaagataattttgaaaagcgatacg 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8169 aactcaatcaacgataatttatctccattgatgtttaagataattttgaaaagcgatacg 8110 Query: 961 gatggtagtagtggccaggaagaggtaatacagtttcagttgccttcgtataattacaca 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8109 gatggtagtagtggccaggaagaggtaatacagtttcagttgccttcgtataattacaca 8050 Query: 1021 aaactattaattgactgctttataaattataacgatggttgtttttactttttcaacgaa 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8049 aaactattaattgactgctttataaattataacgatggttgtttttactttttcaacgaa 7990 Query: 1081 ggcctggttaaatgtggcattaacaaattgtacttggaaaataaatggctatactatgat 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7989 ggcctggttaaatgtggcattaacaaattgtacttggaaaataaatggctatactatgat 7930 Query: 1141 aataccaaaaaagctttggacaatgagaatgatccaattttacaagctgtttggttttgc 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7929 aataccaaaaaagctttggacaatgagaatgatccaattttacaagctgtttggttttgc 7870 Query: 1201 aaaattttgttaattttagcagtaggtgaaatgtatctgggttccatcaataatgaaatg 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7869 aaaattttgttaattttagcagtaggtgaaatgtatctgggttccatcaataatgaaatg 7810 Query: 1261 ttgaagaattattctaatcagccaaaattgcccggttcaaaattttttcaaatgggttct 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7809 ttgaagaattattctaatcagccaaaattgcccggttcaaaattttttcaaatgggttct 7750 Query: 1321 aaaatttttaattgtttgttctcaagtgaaagattagaaaatgtgactaagaaaggcggt 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7749 aaaatttttaattgtttgttctcaagtgaaagattagaaaatgtgactaagaaaggcggt 7690 Query: 1381 attgaagtcctgttgttatacgcgttcttcttacaggtggctgattacactttagcctct 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7689 attgaagtcctgttgttatacgcgttcttcttacaggtggctgattacactttagcctct 7630 Query: 1441 tatttttacttcggtcaagccctaaggacgtgcttaattctaggcttacatgttgattct 1500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7629 tatttttacttcggtcaagccctaaggacgtgcttaattctaggcttacatgttgattct 7570 Query: 1501 caaagcgacactctatccaggtatgaaatcgagcatcataggagactttggtggacagtt 1560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7569 caaagcgacactctatccaggtatgaaatcgagcatcataggagactttggtggacagtt 7510 Query: 1561 tacatgtttgaacgaatgcttagctcaaaagctgggttaccattaagtttcactgattat 1620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7509 tacatgtttgaacgaatgcttagctcaaaagctgggttaccattaagtttcactgattat 7450 Query: 1621 acaatctctacagcactgccagcggatattgatgatgaaactatcgaagagaaaaatagt 1680 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7449 acaatctctacagcactgccagcggatattgatgatgaaactatcgaagagaaaaatagt 7390 Query: 1681 cactatgttttcagaaaggcagaattgatttctaactgcgttactattgtgaaaatcaat 1740 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7389 cactatgttttcagaaaggcagaattgatttctaactgcgttactattgtgaaaatcaat 7330 Query: 1741 gcacaaattttgagcaaattatatcaaaggcaacctgagacaaacatcataattactttg 1800 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7329 gcacaaattttgagcaaattatatcaaaggcaacctgagacaaacatcataattactttg 7270 Query: 1801 aaagttgtcatcaagcagttgttggaatggaggaacaatttgtccgattccttacaggtg 1860 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7269 aaagttgtcatcaagcagttgttggaatggaggaacaatttgtccgattccttacaggtg 7210 Query: 1861 gattttacgcaaaaggatgaagatttcaaaatatcgagattgtcaaccaatatgtttacg 1920 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7209 gattttacgcaaaaggatgaagatttcaaaatatcgagattgtcaaccaatatgtttacg 7150 Query: 1921 gaatattttcaaggaataaacttggccgtgagacctttattatttcattttgcatccatt 1980 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7149 gaatattttcaaggaataaacttggccgtgagacctttattatttcattttgcatccatt 7090 Query: 1981 caattgaaaaggttcaaaacgagcaatactttcgtcaacttacaaaactattctgccaca 2040 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7089 caattgaaaaggttcaaaacgagcaatactttcgtcaacttacaaaactattctgccaca 7030 Query: 2041 atatcttccttattaacatgttctttgcatgcttctgtgaatactattaggtctctgtgg 2100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7029 atatcttccttattaacatgttctttgcatgcttctgtgaatactattaggtctctgtgg 6970 Query: 2101 agtttattacagaatagtatgcttgctatgtttagttatatggacagagagtatcttttt 2160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6969 agtttattacagaatagtatgcttgctatgtttagttatatggacagagagtatcttttt 6910 Query: 2161 acttcttcttgtactttattactattcaacactgcttttggtattcatgaacaaacacta 2220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6909 acttcttcttgtactttattactattcaacactgcttttggtattcatgaacaaacacta 6850 Query: 2221 tatcatttggatcattctctggaaattttcacacaaatgagaaacttaggcaacattcca 2280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6849 tatcatttggatcattctctggaaattttcacacaaatgagaaacttaggcaacattcca 6790 Query: 2281 gcaggcttaagaagagcacaattattaacattaatggcaaatttggatttccacggcata 2340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6789 gcaggcttaagaagagcacaattattaacattaatggcaaatttggatttccacggcata 6730 Query: 2341 atgaatgacttgattactaaatataacgatattttgaaatttgattctatgaattgtgaa 2400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6729 atgaatgacttgattactaaatataacgatattttgaaatttgattctatgaattgtgaa 6670 Query: 2401 aacgataacatagtagaagatagcaatgaacccaaaagagaaaccgaaaagtgtaaacct 2460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6669 aacgataacatagtagaagatagcaatgaacccaaaagagaaaccgaaaagtgtaaacct 6610 Query: 2461 cacaaagatggcgatcgcattgacccttcaattatagactgtgataaatcaaacaccaat 2520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6609 cacaaagatggcgatcgcattgacccttcaattatagactgtgataaatcaaacaccaat 6550 Query: 2521 acaaatatgatcaagaacgaatctatatcgaacattgttagcatacttccggaaggcgcg 2580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6549 acaaatatgatcaagaacgaatctatatcgaacattgttagcatacttccggaaggcgcg 6490 Query: 2581 aaaccaacgctgactgattatagtaatggtaataatgatgttaatgatattaacgtcaat 2640 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6489 aaaccaacgctgactgattatagtaatggtaataatgatgttaatgatattaacgtcaat 6430 Query: 2641 aactcggaaccttctacnnnnnnngatatcataactgcgagcttggaaaattcataccaa 2700 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 6429 aactcggaaccttctactttttttgatatcataactgcgagcttggaaaattcataccaa 6370 Query: 2701 accacgctaactgaaaagggctctcaggtgatggnnnnnnncatggatcagttggattcc 2760 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 6369 accacgctaactgaaaagggctctcaggtgatggaaaaaaacatggatcagttggattcc 6310 Query: 2761 gttcataatctaaatgatgacgatttacaacaattgttggaggatttaggcaatattgat 2820 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6309 gttcataatctaaatgatgacgatttacaacaattgttggaggatttaggcaatattgat 6250 Query: 2821 cattccgatgaaaaactttggaaggaaatcactgatcaagcaatgtggctgggaaatact 2880 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6249 cattccgatgaaaaactttggaaggaaatcactgatcaagcaatgtggctgggaaatact 6190 Query: 2881 atggatccaactgcagctgctggtagtgaaattgactttactgattatttaggaccataa 2940 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6189 atggatccaactgcagctgctggtagtgaaattgactttactgattatttaggaccataa 6130 >gi|4251|emb|X55384.1|SCPUT3 S.cerevisiae PUT3 gene for proline utilization trans-activator Length = 4039 Score = 5689 bits (2870), Expect = 0.0 Identities = 2917/2940 (99%) Strand = Plus / Plus Query: 1 atggtgaccgaccaaggcagtaggcattcgatacaatctaagcaaccagcctacgttaat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 atggtgaccgaccaaggcagtaggcattcgatacaatctaagcaaccagcctacgttaat 960 Query: 61 aaacaaccgcaaaaaaggcagcagagatcttctgtcgcatgcctttcttgtaggaaacgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 aaacaaccgcaaaaaaggcagcagagatcttctgtcgcatgcctttcttgtaggaaacgt 1020 Query: 121 catataaaatgtcctggtggtaacccttgccaaaaatgtgttacgagcaatgccatatgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 catataaaatgtcctggtggtaacccttgccaaaaatgtgttacgagcaatgccatatgt 1080 Query: 181 gagtacttggagccgtcnnnnnnnnttgttgtgtcgacaaagtatctgcaacaactgcaa 240 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1081 gagtacttggagccgtcaaaaaaaattgttgtgtcgacaaagtatctgcaacaactgcaa 1140 Query: 241 aaagacttgaatgataaaactgaagagaataaccgcctgaaagctttgctcttggagaga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 aaagacttgaatgataaaactgaagagaataaccgcctgaaagctttgctcttggagaga 1200 Query: 301 ccagtgagtgtacgtggtaaggataacagcgatgatgacgagaggcatataaacaatgca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ccagtgagtgtacgtggtaaggataacagcgatgatgacgagaggcatataaacaatgca 1260 Query: 361 ccctcaagtgacacattggaagtatccagcgctccggcggctcctatatttgacctcatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 ccctcaagtgacacattggaagtatccagcgctccggcggctcctatatttgacctcatg 1320 Query: 421 tccaatagtaacactgcgtccgataacgataacgacgatgacaacagcaacagaatcaca 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1321 tccaatagtaacactgcgtccgataacgataacgacgatgacaacagcaacagaatcaca 1380 Query: 481 aataataggagctatgatcatagtttggaaaaatactacaaaaaggccatcagcatcttt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1381 aataataggagctatgatcatagtttggaaaaatactacaaaaaggccatcagcatcttt 1440 Query: 541 aaacaaccagctaatgctaatggcgaaaatggcaacggtgccaatggtcatgaggatgat 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1441 aaacaaccagctaatgctaatggcgaaaatggcaacggtgccaatggtcatgaggatgat 1500 Query: 601 gatgaagatgatgaagaaatatcaacaaattttgctcaaagaagtggtaggctcatagaa 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1501 gatgaagatgatgaagaaatatcaacaaattttgctcaaagaagtggtaggctcatagaa 1560 Query: 661 tctcacaatggattccattattttgttggatcttcttcaatgacattatttgggttagaa 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1561 tctcacaatggattccattattttgttggatcttcttcaatgacattatttgggttagaa 1620 Query: 721 attcaatctttggttacaaagtatatttcggtcaagaattttcgacctttgccaataaac 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1621 attcaatctttggttacaaagtatatttcggtcaagaattttcgacctttgccaataaac 1680 Query: 781 accaaaaacaagattttaaattcaaacctgaacccggctataagttcttttatcaattca 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1681 accaaaaacaagattttaaattcaaacctgaacccggctataagttcttttatcaattca 1740 Query: 841 aacaactatcttttctcgtcctataattttttgaaccctatatcgactattgtcaactta 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1741 aacaactatcttttctcgtcctataattttttgaaccctatatcgactattgtcaactta 1800 Query: 901 aactcaatcaacgataatttatctccattgatgtttaagataattttgaaaagcgatacg 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1801 aactcaatcaacgataatttatctccattgatgtttaagataattttgaaaagcgatacg 1860 Query: 961 gatggtagtagtggccaggaagaggtaatacagtttcagttgccttcgtataattacaca 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1861 gatggtagtagtggccaggaagaggtaatacagtttcagttgccttcgtataattacaca 1920 Query: 1021 aaactattaattgactgctttataaattataacgatggttgtttttactttttcaacgaa 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1921 aaactattaattgactgctttataaattataacgatggttgtttttactttttcaacgaa 1980 Query: 1081 ggcctggttaaatgtggcattaacaaattgtacttggaaaataaatggctatactatgat 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1981 ggcctggttaaatgtggcattaacaaattgtacttggaaaataaatggctatactatgat 2040 Query: 1141 aataccaaaaaagctttggacaatgagaatgatccaattttacaagctgtttggttttgc 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2041 aataccaaaaaagctttggacaatgagaatgatccaattttacaagctgtttggttttgc 2100 Query: 1201 aaaattttgttaattttagcagtaggtgaaatgtatctgggttccatcaataatgaaatg 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2101 aaaattttgttaattttagcagtaggtgaaatgtatctgggttccatcaataatgaaatg 2160 Query: 1261 ttgaagaattattctaatcagccaaaattgcccggttcaaaattttttcaaatgggttct 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2161 ttgaagaattattctaatcagccaaaattgcccggttcaaaattttttcaaatgggttct 2220 Query: 1321 aaaatttttaattgtttgttctcaagtgaaagattagaaaatgtgactaagaaaggcggt 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2221 aaaatttttaattgtttgttctcaagtgaaagattagaaaatgtgactaagaaaggcggt 2280 Query: 1381 attgaagtcctgttgttatacgcgttcttcttacaggtggctgattacactttagcctct 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2281 attgaagtcctgttgttatacgcgttcttcttacaggtggctgattacactttagcctct 2340 Query: 1441 tatttttacttcggtcaagccctaaggacgtgcttaattctaggcttacatgttgattct 1500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2341 tatttttacttcggtcaagccctaaggacgtgcttaattctaggcttacatgttgattct 2400 Query: 1501 caaagcgacactctatccaggtatgaaatcgagcatcataggagactttggtggacagtt 1560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2401 caaagcgacactctatccaggtatgaaatcgagcatcataggagactttggtggacagtt 2460 Query: 1561 tacatgtttgaacgaatgcttagctcaaaagctgggttaccattaagtttcactgattat 1620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2461 tacatgtttgaacgaatgcttagctcaaaagctgggttaccattaagtttcactgattat 2520 Query: 1621 acaatctctacagcactgccagcggatattgatgatgaaactatcgaagagaaaaatagt 1680 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2521 acaatctctacagcactgccagcggatattgatgatgaaactatcgaagagaaaaatagt 2580 Query: 1681 cactatgttttcagaaaggcagaattgatttctaactgcgttactattgtgaaaatcaat 1740 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2581 cactatgttttcagaaaggcagaattgatttctaactgcgttactattgtgaaaatcaat 2640 Query: 1741 gcacaaattttgagcaaattatatcaaaggcaacctgagacaaacatcataattactttg 1800 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2641 gcacaaattttgagcaaattatatcaaaggcaacctgagacaaacatcataattactttg 2700 Query: 1801 aaagttgtcatcaagcagttgttggaatggaggaacaatttgtccgattccttacaggtg 1860 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2701 aaagttgtcatcaagcagttgttggaatggaggaacaatttgtccgattccttacaggtg 2760 Query: 1861 gattttacgcaaaaggatgaagatttcaaaatatcgagattgtcaaccaatatgtttacg 1920 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2761 gattttacgcaaaaggatgaagatttcaaaatatcgagattgtcaaccaatatgtttacg 2820 Query: 1921 gaatattttcaaggaataaacttggccgtgagacctttattatttcattttgcatccatt 1980 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2821 gaatattttcaaggaataaacttggccgtgagacctttattatttcattttgcatccatt 2880 Query: 1981 caattgaaaaggttcaaaacgagcaatactttcgtcaacttacaaaactattctgccaca 2040 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2881 caattgaaaaggttcaaaacgagcaatactttcgtcaacttacaaaactattctgccaca 2940 Query: 2041 atatcttccttattaacatgttctttgcatgcttctgtgaatactattaggtctctgtgg 2100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2941 atatcttccttattaacatgttctttgcatgcttctgtgaatactattaggtctctgtgg 3000 Query: 2101 agtttattacagaatagtatgcttgctatgtttagttatatggacagagagtatcttttt 2160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3001 agtttattacagaatagtatgcttgctatgtttagttatatggacagagagtatcttttt 3060 Query: 2161 acttcttcttgtactttattactattcaacactgcttttggtattcatgaacaaacacta 2220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 3061 acttcttcttgtactttattactattcaacactgcttttggtattcatgaacaaacgcta 3120 Query: 2221 tatcatttggatcattctctggaaattttcacacaaatgagaaacttaggcaacattcca 2280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3121 tatcatttggatcattctctggaaattttcacacaaatgagaaacttaggcaacattcca 3180 Query: 2281 gcaggcttaagaagagcacaattattaacattaatggcaaatttggatttccacggcata 2340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3181 gcaggcttaagaagagcacaattattaacattaatggcaaatttggatttccacggcata 3240 Query: 2341 atgaatgacttgattactaaatataacgatattttgaaatttgattctatgaattgtgaa 2400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3241 atgaatgacttgattactaaatataacgatattttgaaatttgattctatgaattgtgaa 3300 Query: 2401 aacgataacatagtagaagatagcaatgaacccaaaagagaaaccgaaaagtgtaaacct 2460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3301 aacgataacatagtagaagatagcaatgaacccaaaagagaaaccgaaaagtgtaaacct 3360 Query: 2461 cacaaagatggcgatcgcattgacccttcaattatagactgtgataaatcaaacaccaat 2520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3361 cacaaagatggcgatcgcattgacccttcaattatagactgtgataaatcaaacaccaat 3420 Query: 2521 acaaatatgatcaagaacgaatctatatcgaacattgttagcatacttccggaaggcgcg 2580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3421 acaaatatgatcaagaacgaatctatatcgaacattgttagcatacttccggaaggcgcg 3480 Query: 2581 aaaccaacgctgactgattatagtaatggtaataatgatgttaatgatattaacgtcaat 2640 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3481 aaaccaacgctgactgattatagtaatggtaataatgatgttaatgatattaacgtcaat 3540 Query: 2641 aactcggaaccttctacnnnnnnngatatcataactgcgagcttggaaaattcataccaa 2700 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3541 aactcggaaccttctactttttttgatatcataactgcgagcttggaaaattcataccaa 3600 Query: 2701 accacgctaactgaaaagggctctcaggtgatggnnnnnnncatggatcagttggattcc 2760 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 3601 accacgctaactgaaaagggctctcaggtgatggaaaaaaacatggatcagttggattcc 3660 Query: 2761 gttcataatctaaatgatgacgatttacaacaattgttggaggatttaggcaatattgat 2820 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3661 gttcataatctaaatgatgacgatttacaacaattgttggaggatttaggcaatattgat 3720 Query: 2821 cattccgatgaaaaactttggaaggaaatcactgatcaagcaatgtggctgggaaatact 2880 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3721 cattccgatgaaaaactttggaaggaaatcactgatcaagcaatgtggctgggaaatact 3780 Query: 2881 atggatccaactgcagctgctggtagtgaaattgactttactgattatttaggaccataa 2940 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3781 atggatccaactgcagctgctggtagtgaaattgactttactgattatttaggaccataa 3840 >gi|23497662|gb|AE014826.1| Plasmodium falciparum 3D7 chromosome 14 section 11 of 13 of the complete sequence Length = 250663 Score = 50.1 bits (25), Expect = 0.020 Identities = 28/29 (96%) Strand = Plus / Minus Query: 590 atgaggatgatgatgaagatgatgaagaa 618 ||||||||||||| ||||||||||||||| Sbjct: 19195 atgaggatgatgaggaagatgatgaagaa 19167 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 596 atgatgatgaagatgatgaag 616 ||||||||||||||||||||| Sbjct: 234857 atgatgatgaagatgatgaag 234837 >gi|10334498|emb|AJ299062.1|CAR299062 Cicer arietinum partial mRNA for hypothetical protein (ORF1), clone Can183 Length = 1041 Score = 50.1 bits (25), Expect = 0.020 Identities = 25/25 (100%) Strand = Plus / Plus Query: 590 atgaggatgatgatgaagatgatga 614 ||||||||||||||||||||||||| Sbjct: 99 atgaggatgatgatgaagatgatga 123 >gi|500825|gb|U10556.1|YSCH9205 Saccharomyces cerevisiae chromosome VIII cosmid 9205 Length = 39203 Score = 50.1 bits (25), Expect = 0.020 Identities = 25/25 (100%) Strand = Plus / Minus Query: 590 atgaggatgatgatgaagatgatga 614 ||||||||||||||||||||||||| Sbjct: 14036 atgaggatgatgatgaagatgatga 14012 >gi|967212|gb|U28158.1|SCU28158 Saccharomyces cerevisiae Ifs1p (IFS1) gene, complete cds Length = 4883 Score = 50.1 bits (25), Expect = 0.020 Identities = 25/25 (100%) Strand = Plus / Plus Query: 590 atgaggatgatgatgaagatgatga 614 ||||||||||||||||||||||||| Sbjct: 2754 atgaggatgatgatgaagatgatga 2778 >gi|555938|gb|U14974.1|SCU14974 Saccharomyces cerevisiae Nmd2p (NMD2) gene, complete cds Length = 4080 Score = 50.1 bits (25), Expect = 0.020 Identities = 25/25 (100%) Strand = Plus / Plus Query: 590 atgaggatgatgatgaagatgatga 614 ||||||||||||||||||||||||| Sbjct: 3212 atgaggatgatgatgaagatgatga 3236 >gi|806703|gb|U12137.1|SCU12137 Saccharomyces cerevisiae Upf2p (UPF2) gene, complete cds Length = 5015 Score = 50.1 bits (25), Expect = 0.020 Identities = 25/25 (100%) Strand = Plus / Plus Query: 590 atgaggatgatgatgaagatgatga 614 ||||||||||||||||||||||||| Sbjct: 4031 atgaggatgatgatgaagatgatga 4055 >gi|28829247|gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence Length = 333321 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Plus Query: 590 atgaggatgatgatgaagatgatgaaga 617 |||| ||||||||||||||||||||||| Sbjct: 264743 atgatgatgatgatgaagatgatgaaga 264770 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 590 atgaggatgatgatgaagatgatgaagaa 618 |||| ||||||||||| |||||||||||| Sbjct: 268293 atgatgatgatgatgatgatgatgaagaa 268321 >gi|28829751|gb|AC116305.2| Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence Length = 413138 Score = 48.1 bits (24), Expect = 0.078 Identities = 24/24 (100%) Strand = Plus / Plus Query: 597 tgatgatgaagatgatgaagaaat 620 |||||||||||||||||||||||| Sbjct: 382617 tgatgatgaagatgatgaagaaat 382640 >gi|28570302|gb|AC091869.4| Homo sapiens chromosome 5 clone CTD-2381F15, complete sequence Length = 156441 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Plus Query: 590 atgaggatgatgatgaagatgatgaaga 617 |||| ||||||||||||||||||||||| Sbjct: 108382 atgatgatgatgatgaagatgatgaaga 108409 >gi|23496588|gb|AE014845.1| Plasmodium falciparum 3D7 chromosome 12, section 2 of 9 of the complete sequence Length = 250531 Score = 48.1 bits (24), Expect = 0.078 Identities = 24/24 (100%) Strand = Plus / Minus Query: 594 ggatgatgatgaagatgatgaaga 617 |||||||||||||||||||||||| Sbjct: 26953 ggatgatgatgaagatgatgaaga 26930 >gi|23496531|gb|AE014844.1| Plasmodium falciparum 3D7 chromosome 12, section 1 of 9 of the complete sequence Length = 251551 Score = 48.1 bits (24), Expect = 0.078 Identities = 24/24 (100%) Strand = Plus / Minus Query: 595 gatgatgatgaagatgatgaagaa 618 |||||||||||||||||||||||| Sbjct: 77469 gatgatgatgaagatgatgaagaa 77446 >gi|24497617|ref|NM_014109.2| Homo sapiens PRO2000 protein (PRO2000), mRNA Length = 4916 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Plus Query: 590 atgaggatgatgatgaagatgatgaaga 617 |||| ||||||||||||||||||||||| Sbjct: 908 atgatgatgatgatgaagatgatgaaga 935 >gi|25167092|gb|AF267168.3| Homo sapiens chromosome 8 clone RP11-134N2, complete sequence Length = 180957 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Minus Query: 590 atgaggatgatgatgaagatgatgaaga 617 |||| ||||||||||||||||||||||| Sbjct: 81248 atgatgatgatgatgaagatgatgaaga 81221 >gi|25167091|gb|AF254981.4| Homo sapiens chromosome 8 clone RP11-429D14 map 8q24.2, complete sequence Length = 202142 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Minus Query: 590 atgaggatgatgatgaagatgatgaaga 617 |||| ||||||||||||||||||||||| Sbjct: 19412 atgatgatgatgatgaagatgatgaaga 19385 >gi|25167090|gb|AC133330.2| Homo sapiens chromosome 8 clone RP11-139A3 map 8q24.2, complete sequence Length = 164957 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Minus Query: 590 atgaggatgatgatgaagatgatgaaga 617 |||| ||||||||||||||||||||||| Sbjct: 65248 atgatgatgatgatgaagatgatgaaga 65221 >gi|12408709|gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromosome III BAC T4P13 genomic sequence, complete sequence Length = 93735 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Minus Query: 590 atgaggatgatgatgaagatgatgaaga 617 |||| ||||||||||||||||||||||| Sbjct: 70412 atgatgatgatgatgaagatgatgaaga 70385 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 588 tcatgaggatgatgatgaagatgatgaaga 617 |||||| ||||||||||| ||||||||||| Sbjct: 70423 tcatgatgatgatgatgatgatgatgaaga 70394 >gi|23495098|gb|AE014833.1| Plasmodium falciparum 3D7 chromosome 10 section 5 of 7 of the complete sequence Length = 252394 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Minus Query: 590 atgaggatgatgatgaagatgatgaaga 617 |||| ||||||||||||||||||||||| Sbjct: 127804 atgaagatgatgatgaagatgatgaaga 127777 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 596 atgatgatgaagatgatgaaga 617 |||||||||||||||||||||| Sbjct: 127717 atgatgatgaagatgatgaaga 127696 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 590 atgaggatgatgatgaagatgatga 614 |||| |||||||||||||||||||| Sbjct: 28201 atgaagatgatgatgaagatgatga 28225 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 590 atgaggatgatgatgaagatgatga 614 |||| |||||||||||||||||||| Sbjct: 28189 atgatgatgatgatgaagatgatga 28213 >gi|22330781|ref|NM_110973.2| Arabidopsis thaliana chromosome 3 CHR3v07142002 genomic sequence Length = 1272 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Plus Query: 590 atgaggatgatgatgaagatgatgaaga 617 |||| ||||||||||||||||||||||| Sbjct: 782 atgatgatgatgatgaagatgatgaaga 809 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 588 tcatgaggatgatgatgaagatgatgaaga 617 |||||| ||||||||||| ||||||||||| Sbjct: 771 tcatgatgatgatgatgatgatgatgaaga 800 >gi|19482348|gb|AC021305.9| Homo sapiens chromosome 8, clone RP11-140B16, complete sequence Length = 164916 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Minus Query: 590 atgaggatgatgatgaagatgatgaaga 617 |||| ||||||||||||||||||||||| Sbjct: 65294 atgatgatgatgatgaagatgatgaaga 65267 >gi|18854958|gb|AC091873.2| Homo sapiens chromosome 5 clone CTD-2577N22, complete sequence Length = 166885 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Minus Query: 590 atgaggatgatgatgaagatgatgaaga 617 |||| ||||||||||||||||||||||| Sbjct: 114217 atgatgatgatgatgaagatgatgaaga 114190 >gi|16798365|gb|AF426254.1|AF426254 Arabidopsis thaliana WRKY transcription factor 58 (WRKY58) mRNA, complete cds Length = 1272 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Plus Query: 590 atgaggatgatgatgaagatgatgaaga 617 |||| ||||||||||||||||||||||| Sbjct: 782 atgatgatgatgatgaagatgatgaaga 809 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 588 tcatgaggatgatgatgaagatgatgaaga 617 |||||| ||||||||||| ||||||||||| Sbjct: 771 tcatgatgatgatgatgatgatgatgaaga 800 >gi|13938012|gb|BC007123.1|BC007123 Homo sapiens, Similar to RIKEN cDNA 2610509G12 gene, clone MGC:5254 IMAGE:3454033, mRNA, complete cds Length = 3140 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Plus Query: 590 atgaggatgatgatgaagatgatgaaga 617 |||| ||||||||||||||||||||||| Sbjct: 862 atgatgatgatgatgaagatgatgaaga 889 >gi|63704|emb|X17200.1|GGNPNO38 Chicken mRNA for nucleolar protein No38 (B23) Length = 1137 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Plus Query: 590 atgaggatgatgatgaagatgatgaaga 617 |||||||||||||||| ||||||||||| Sbjct: 566 atgaggatgatgatgaggatgatgaaga 593 >gi|7705211|gb|AC011890.4|AC011890 Homo sapiens PAC clone RP4-655L22 from Xq23, complete sequence Length = 158907 Score = 48.1 bits (24), Expect = 0.078 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1308 tcaaatgggttctaaaatttttaa 1331 |||||||||||||||||||||||| Sbjct: 12044 tcaaatgggttctaaaatttttaa 12021 >gi|21734301|emb|AL833653.1|HSM804966 Homo sapiens mRNA; cDNA DKFZp667N1320 (from clone DKFZp667N1320) Length = 4687 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Plus Query: 590 atgaggatgatgatgaagatgatgaaga 617 |||| ||||||||||||||||||||||| Sbjct: 680 atgatgatgatgatgaagatgatgaaga 707 >gi|20196613|emb|AL645547.14| Mouse DNA sequence from clone RP23-158M12 on chromosome X, complete sequence Length = 173477 Score = 48.1 bits (24), Expect = 0.078 Identities = 30/32 (93%) Strand = Plus / Minus Query: 584 atggtcatgaggatgatgatgaagatgatgaa 615 ||||| ||||||| |||||||||||||||||| Sbjct: 110891 atggttatgaggaagatgatgaagatgatgaa 110860 >gi|21907955|dbj|AP004939.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17M09, TM0105, complete sequence Length = 127990 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Minus Query: 590 atgaggatgatgatgaagatgatgaaga 617 ||||||| |||||||||||||||||||| Sbjct: 102673 atgaggaagatgatgaagatgatgaaga 102646 >gi|21756798|dbj|AK097133.1| Homo sapiens cDNA FLJ39814 fis, clone SPLEN2009970, weakly similar to TAT-BINDING HOMOLOG 7 Length = 3025 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Plus Query: 590 atgaggatgatgatgaagatgatgaaga 617 |||| ||||||||||||||||||||||| Sbjct: 908 atgatgatgatgatgaagatgatgaaga 935 >gi|28973838|gb|AC009364.9| Homo sapiens chromosome 7 clone RP11-348A15, complete sequence Length = 151153 Score = 46.1 bits (23), Expect = 0.31 Identities = 29/31 (93%) Strand = Plus / Minus Query: 584 atggtcatgaggatgatgatgaagatgatga 614 ||||| |||||||||||||||| |||||||| Sbjct: 14126 atggtgatgaggatgatgatgaggatgatga 14096 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 590 atgaggatgatgatgaagatgatga 614 |||||||||||||||| |||||||| Sbjct: 14108 atgaggatgatgatgatgatgatga 14084 >gi|28828986|gb|AC116982.2| Dictyostelium discoideum chromosome 2 map 3622643-3879522 strain AX4, complete sequence Length = 256879 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 595 gatgatgatgaagatgatgaaga 617 ||||||||||||||||||||||| Sbjct: 186151 gatgatgatgaagatgatgaaga 186173 >gi|28828496|gb|AC116956.2| Dictyostelium discoideum chromosome 2 map 1418423-1684967 strain AX4, complete sequence Length = 266544 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 595 gatgatgatgaagatgatgaaga 617 ||||||||||||||||||||||| Sbjct: 67090 gatgatgatgaagatgatgaaga 67112 >gi|28828407|gb|AC116330.2| Dictyostelium discoideum chromosome 2 map 3191214-3323468 strain AX4, complete sequence Length = 132254 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 595 gatgatgatgaagatgatgaaga 617 ||||||||||||||||||||||| Sbjct: 74806 gatgatgatgaagatgatgaaga 74784 >gi|25025070|ref|XM_206987.1| Mus musculus suppressor of Ty 6 homolog (S. cerevisiae) (Supt6h), mRNA Length = 5925 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 595 gatgatgatgaagatgatgaaga 617 ||||||||||||||||||||||| Sbjct: 561 gatgatgatgaagatgatgaaga 583 >gi|25025823|ref|XM_203127.1| Mus musculus suppressor of Ty 6 homolog (S. cerevisiae) (Supt6h), mRNA Length = 5925 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 595 gatgatgatgaagatgatgaaga 617 ||||||||||||||||||||||| Sbjct: 561 gatgatgatgaagatgatgaaga 583 >gi|22945392|gb|AE003583.3| Drosophila melanogaster chromosome 2L section 8 of 83 of the complete sequence Length = 303641 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Minus Query: 588 tcatgaggatgatgatgaagatgatga 614 |||||| |||||||||||||||||||| Sbjct: 192759 tcatgatgatgatgatgaagatgatga 192733 >gi|27673592|ref|XM_239258.1| Rattus norvegicus LOC303281 (LOC303281), mRNA Length = 4977 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 595 gatgatgatgaagatgatgaaga 617 ||||||||||||||||||||||| Sbjct: 373 gatgatgatgaagatgatgaaga 395 >gi|27476109|gb|AC130454.2| Homo sapiens chromosome 16 clone CTA-345G4, complete sequence Length = 260160 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Plus Query: 590 atgaggatgatgatgaagatgatgaag 616 |||||||||||||||| |||||||||| Sbjct: 105576 atgaggatgatgatgatgatgatgaag 105602 >gi|24418074|gb|AC106818.2| Homo sapiens chromosome 5 clone RP11-65F13, complete sequence Length = 180056 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 592 gaggatgatgatgaagatgatga 614 ||||||||||||||||||||||| Sbjct: 150586 gaggatgatgatgaagatgatga 150564 >gi|23953894|gb|AY159040.1| Dictyostelium discoideum LvsD (lvsD) gene, partial cds Length = 8980 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 595 gatgatgatgaagatgatgaaga 617 ||||||||||||||||||||||| Sbjct: 717 gatgatgatgaagatgatgaaga 695 >gi|23497422|gb|AE014822.1| Plasmodium falciparum 3D7 chromosome 14 section 7 of 13 of the complete sequence Length = 253924 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 595 gatgatgatgaagatgatgaaga 617 ||||||||||||||||||||||| Sbjct: 163581 gatgatgatgaagatgatgaaga 163559 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 590 atgaggatgatgatgaagatgatga 614 |||| |||||||||||||||||||| Sbjct: 163556 atgatgatgatgatgaagatgatga 163532 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 590 atgaggatgatgatgaagatgatga 614 |||| |||||||||||||||||||| Sbjct: 163409 atgaagatgatgatgaagatgatga 163385 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 590 atgaggatgatgatgaagatgatga 614 |||| |||||||||||||||||||| Sbjct: 163493 atgatgatgatgatgaagatgatga 163469 >gi|23496321|gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete sequence Length = 253151 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 595 gatgatgatgaagatgatgaaga 617 ||||||||||||||||||||||| Sbjct: 175940 gatgatgatgaagatgatgaaga 175918 >gi|23494991|gb|AE014831.1| Plasmodium falciparum 3D7 chromosome 10 section 3 of 7 of the complete sequence Length = 250195 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 595 gatgatgatgaagatgatgaaga 617 ||||||||||||||||||||||| Sbjct: 68817 gatgatgatgaagatgatgaaga 68839 >gi|22330141|ref|NM_103877.2| Arabidopsis thaliana chromosome 1 CHR1v07142002 genomic sequence Length = 2754 Score = 46.1 bits (23), Expect = 0.31 Identities = 29/31 (93%) Strand = Plus / Plus Query: 584 atggtcatgaggatgatgatgaagatgatga 614 ||||| |||||||||||||||| |||||||| Sbjct: 1949 atggtgatgaggatgatgatgatgatgatga 1979 >gi|18414993|ref|NM_117904.1| Arabidopsis thaliana chromosome 4 CHR4v07142002 genomic sequence Length = 1058 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Plus Query: 592 gaggatgatgatgaagatgatgaagaa 618 |||||||||||||| |||||||||||| Sbjct: 790 gaggatgatgatgatgatgatgaagaa 816 >gi|22138633|gb|AC121808.2| Mus musculus chromosome 13 clone RP23-449M23, complete sequence Length = 194020 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 595 gatgatgatgaagatgatgaaga 617 ||||||||||||||||||||||| Sbjct: 60243 gatgatgatgaagatgatgaaga 60221 >gi|21844674|gb|AC121783.2| Mus musculus clone RP23-370I9, complete sequence Length = 184366 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 596 atgatgatgaagatgatgaagaa 618 ||||||||||||||||||||||| Sbjct: 128215 atgatgatgaagatgatgaagaa 128237 >gi|21405987|gb|AY087263.1| Arabidopsis thaliana clone 33385 mRNA, complete sequence Length = 1065 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Plus Query: 592 gaggatgatgatgaagatgatgaagaa 618 |||||||||||||| |||||||||||| Sbjct: 790 gaggatgatgatgatgatgatgaagaa 816 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS, or phase 0, 1 or 2 HTGS sequences) Posted date: Mar 20, 2003 10:39 PM Number of letters in database: -658,021,059 Number of sequences in database: 1,707,549 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 16,042,196 Number of Sequences: 1707549 Number of extensions: 16042196 Number of successful extensions: 127839 Number of sequences better than 10.0: 400 Number of HSP's better than 10.0 without gapping: 400 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 124546 Number of HSP's gapped (non-prelim): 3098 length of query: 2940 length of database: 7,931,913,529 effective HSP length: 22 effective length of query: 2918 effective length of database: 7,894,347,451 effective search space: 23035705862018 effective search space used: 23035705862018 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)
BLASTX 2.2.5 [Nov-16-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1048254514-04244-28672 Query= ORFN:YKL015W PUT3 SGDID:S0001498, Chr XI from 408182-411121 (2940 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,376,251 sequences; 442,128,549 total letters Score E Sequences producing significant alignments: (bits) Value gi|6322837|ref|NP_012910.1| Positive regulator of PUT (proline u... 1753 0.0 gi|2554806|pdb|1AJY|A Chain A, Structure And Mobility Of The Put... 147 7e-34 gi|3660288|pdb|1ZME|C Chain C, Crystal Structure Of Put3DNA COMP... 147 7e-34 gi|19114517|ref|NP_593605.1| putative regulatory protein; zinc f... 104 9e-21 gi|6322061|ref|NP_012136.1| Gcn5 INdependent; Gin1p [Saccharomyc... 86 4e-15 gi|21913144|gb|AAK84946.1| transcriptional activator Mut3p [Pich... 77 2e-12 gi|19075786|ref|NP_588286.1| putative zinc-finger protein [Schiz... 76 3e-12 gi|2808662|emb|CAA11374.1| PrnA protein [Aspergillus nidulans] 75 8e-12 gi|730941|sp|P36598|THI1_SCHPO Thiamine repressible genes regula... 74 2e-11 gi|499202|gb|AAA19010.1| transcription factor 73 3e-11 gi|19112113|ref|NP_595321.1| putative transcriptional activator ... 67 2e-09 gi|6322255|ref|NP_012329.1| Hypothetical ORF; Yjl206cp [Saccharo... 64 1e-08 gi|28975427|gb|AAO64247.1| unknown [Fusarium sporotrichioides] 61 9e-08 gi|2501737|sp|P87000|AC15_NEUCR TRANSCRIPTIONAL ACTIVATOR PROTEI... 57 1e-06 gi|18307443|emb|CAD21506.1| transcription activator protein acu-... 57 1e-06 gi|28917831|gb|EAA27519.1| hypothetical protein [Neurospora crassa] 56 3e-06 gi|2262189|gb|AAB63564.1| FacB [Aspergillus oryzae] 55 6e-06 gi|6325008|ref|NP_015076.1| Positive regulator of GAL genes; Gal... 55 8e-06 gi|2262191|gb|AAB63565.1| acetate regulatory DNA binding protein... 55 8e-06 gi|19113557|ref|NP_596765.1| fungal Zn(2)-Cys(6) binuclear clust... 54 1e-05 gi|19115010|ref|NP_594098.1| thiamine repressible genes regulato... 54 1e-05 gi|28923914|gb|EAA33075.1| hypothetical protein [Neurospora crassa] 54 2e-05 gi|28917002|gb|EAA26729.1| hypothetical protein [Neurospora crassa] 52 4e-05 gi|19113329|ref|NP_596537.1| putative transcriptional regulator ... 52 4e-05 gi|28950356|emb|CAD70980.1| hypothetical protein [Neurospora cra... 52 4e-05 gi|28922218|gb|EAA31465.1| hypothetical protein [Neurospora crassa] 52 4e-05 gi|19115409|ref|NP_594497.1| putative transcriptional regulatory... 52 7e-05 gi|11359441|pir||T49482 hypothetical protein B14D6.340 [imported... 52 7e-05 gi|28916821|gb|EAA26569.1| predicted protein [Neurospora crassa] 50 2e-04 gi|2262187|gb|AAB63563.1| FacB [Aspergillus niger] 50 2e-04 gi|6323042|ref|NP_013114.1| Positive regulator of URA1 and URA3;... 50 2e-04 gi|19114082|ref|NP_593170.1| putative transcriptional activator ... 50 2e-04 gi|28927389|gb|EAA36342.1| hypothetical protein [Neurospora crassa] 49 4e-04 gi|27311709|gb|AAO00820.1| Unknown protein [Arabidopsis thaliana] 49 6e-04 gi|28920188|gb|EAA29566.1| hypothetical protein [Neurospora crassa] 48 8e-04 gi|11359660|pir||T51029 related to pathway-specific nitrogen reg... 48 0.001 gi|7021392|gb|AAF35321.1|AF222908_1 Cat8 [Candida albicans] 48 0.001 gi|19111861|ref|NP_595069.1| putative transcriptional activator,... 48 0.001 gi|11359280|pir||T37601 probable trancription factor - fission y... 47 0.001 gi|4165298|emb|CAA22853.1| putative transcriptional regulator [S... 47 0.001 gi|28916984|gb|EAA26713.1| hypothetical protein [Neurospora crassa] 47 0.001 gi|1351343|sp|P49413|UAY_EMENI Positive regulator of purine util... 47 0.002 gi|28917489|gb|EAA27189.1| hypothetical protein [Neurospora crassa] 47 0.002 gi|28950054|emb|CAD70808.1| hypothetical protein [Neurospora cra... 47 0.002 gi|28920608|gb|EAA29970.1| predicted protein [Neurospora crassa] 47 0.002 gi|28920849|gb|EAA30193.1| hypothetical protein [Neurospora crassa] 47 0.002 gi|6321727|ref|NP_011804.1| Part of complex locus MAL1; nonfunct... 46 0.003 gi|21542089|sp|Q9C469|GRT1_SCHPO Zinc finger protein grt1 >gi|12... 46 0.003 gi|171895|gb|AAA34760.1| sequence similarity to yeast MALR prote... 46 0.003 gi|28921990|gb|EAA31262.1| predicted protein [Neurospora crassa] 46 0.003 gi|28919188|gb|EAA28676.1| predicted protein [Neurospora crassa] 46 0.003 gi|28921809|gb|EAA31086.1| hypothetical protein [Neurospora crassa] 46 0.004 gi|6324956|ref|NP_015025.1| Repressor of drug resistance; Rdr1p ... 45 0.007 gi|3881|emb|CAA33319.1| MALp (MALR) protein (AA 1 - 470) [Saccha... 45 0.007 gi|28920224|gb|EAA29601.1| hypothetical protein [Neurospora cras... 45 0.007 gi|6319466|ref|NP_009548.1| Zinc-finger transcription factor rel... 45 0.007 gi|7580487|gb|AAB23986.2| multidrug resistance PDR1 protein homo... 45 0.007 gi|23503476|dbj|BAC20339.1| transcriptional regulator [Aspergill... 45 0.009 gi|4071315|gb|AAC98670.1| zinc cluster transcription factor Fcr1... 45 0.009 gi|7493819|pir||T14913 CAT8 protein - yeast (Kluyveromyces marxi... 45 0.009 gi|28926942|gb|EAA35902.1| predicted protein [Neurospora crassa] 44 0.011 gi|6319774|ref|NP_009856.1| Part of complex locus MAL3; nonfunct... 44 0.011 gi|2197061|gb|AAB67709.1| Mal63-13p [Saccharomyces cerevisiae] 44 0.015 gi|28924323|gb|EAA33476.1| hypothetical protein [Neurospora crassa] 44 0.015 gi|171885|gb|AAA34755.1| maltose activator protein (MAL63) 44 0.015 gi|126712|sp|P10508|MA6R_YEAST MALTOSE FERMENTATION REGULATORY P... 44 0.015 gi|19113913|ref|NP_593001.1| putative transcriptional regulatory... 44 0.015 gi|1706177|sp|P52959|CT1B_FUSSO CUTINASE TRANSCRIPTION FACTOR 1 ... 44 0.015 gi|28918559|gb|EAA28231.1| hypothetical protein [Neurospora crassa] 44 0.019 gi|2330865|emb|CAB11287.1| thiamine repressible genes regulatory... 44 0.019 gi|19112110|ref|NP_595318.1| putative transcriptional activator ... 44 0.019 gi|6319716|ref|NP_009798.1| Hypothetical ORF; Ybr239cp [Saccharo... 44 0.019 gi|28918855|gb|EAA28524.1| predicted protein [Neurospora crassa] 44 0.019 gi|28923333|gb|EAA32527.1| predicted protein [Neurospora crassa] 44 0.019 gi|6321425|ref|NP_011502.1| general positive regulator of permea... 44 0.019 gi|129733|sp|P12383|PDR1_YEAST Pleiotropic drug resistance regul... 44 0.019 gi|6715097|gb|AAF26277.1|AF168613_4 sugar regulator [Aspergillus... 43 0.025 gi|166488|gb|AAA32686.1| regulatory protein 43 0.033 gi|6478882|gb|AAF14015.1|M81157_1 putative [Saccharomyces pastor... 43 0.033 gi|2199537|gb|AAB67707.1| MAL-activator 23 [Saccharomyces cerevi... 43 0.033 gi|2199539|gb|AAB67708.1| MAL-activator 23-C [Saccharomyces cere... 43 0.033 gi|1122901|emb|CAA63906.1| MSP8 [Saccharomyces cerevisiae] 43 0.033 gi|6323936|ref|NP_014007.1| CAT8 controls the key enzymes of glu... 43 0.033 gi|559524|emb|CAA55139.1| CAT8 [Saccharomyces cerevisiae] 43 0.033 gi|11595549|emb|CAC18265.1| conserved hypothetical protein [Neur... 42 0.043 gi|7706833|gb|AAD13897.2|S58126_111111 Unknown [Saccharomyces ce... 42 0.043 gi|19113716|ref|NP_592804.1| putative transcriptional regulator,... 42 0.056 gi|27261461|gb|AAN86010.1| unknown [Nectria haematococca] 42 0.056 gi|3929345|sp|O13360|FLUF_NEUCR Conidial development protein flu... 42 0.074 gi|28921193|gb|EAA30506.1| hypothetical protein [Neurospora crassa] 42 0.074 gi|28926130|gb|EAA35115.1| predicted protein [Neurospora crassa] 42 0.074 gi|6324391|ref|NP_014461.1| Hypothetical ORF; Ynr063wp [Saccharo... 42 0.074 gi|21627825|emb|CAD37157.1| hypothetical protein [Aspergillus fu... 42 0.074 gi|28917943|gb|EAA27628.1| hypothetical protein [Neurospora crassa] 42 0.074 gi|18376352|emb|CAD21130.1| conserved hypothetical protein [Neur... 42 0.074 gi|19112335|ref|NP_595543.1| fungal Zn(2)-Cys(6) binuclear clust... 41 0.096 gi|131767|sp|P10563|QUTA_EMENI QUINIC ACID UTILIZATION ACTIVATOR... 41 0.096 gi|28923540|gb|EAA32716.1| hypothetical protein [Neurospora crassa] 41 0.096 gi|7959169|dbj|BAA95967.1| transcription activator [Aspergillus ... 41 0.096 gi|28923893|gb|EAA33055.1| predicted protein [Neurospora crassa] 41 0.13 ALIGNMENTS >gi|6322837|ref|NP_012910.1| Positive regulator of PUT (proline utilization) genes; Put3p [Saccharomyces cerevisiae] gi|131653|sp|P25502|PUT3_YEAST Proline utilization trans-activator gi|101671|pir||A39792 transcription activator PUT3 - yeast (Saccharomyces cerevisiae) gi|4252|emb|CAA39055.1| proline utilization trans-activator [Saccharomyces cerevisiae] gi|395257|emb|CAA52267.1| orf5~homologous to S.cerevisiae PUT3 gene [Saccharomyces cerevisiae] gi|486003|emb|CAA81850.1| ORF YKL015w [Saccharomyces cerevisiae] Length = 979 Score = 1753 bits (4539), Expect = 0.0 Identities = 886/979 (90%), Positives = 886/979 (90%) Frame = +1 Query: 1 MVTDQGSRHSIQSKQPAYVNKQPQKRQQRSSVACLSCRKRHIKCPGGNPCQKCVTSNAIC 180 MVTDQGSRHSIQSKQPAYVNKQPQKRQQRSSVACLSCRKRHIKCPGGNPCQKCVTSNAIC Sbjct: 1 MVTDQGSRHSIQSKQPAYVNKQPQKRQQRSSVACLSCRKRHIKCPGGNPCQKCVTSNAIC 60 Query: 181 EYLEPSKKIVVSTKYLQQLQKDLNDKTEENNRLKALLLERPVSVRGKDNSDDDERHINNA 360 EYLEPSKKIVVSTKYLQQLQKDLNDKTEENNRLKALLLERPVSVRGKDNSDDDERHINNA Sbjct: 61 EYLEPSKKIVVSTKYLQQLQKDLNDKTEENNRLKALLLERPVSVRGKDNSDDDERHINNA 120 Query: 361 PSSDTLEVSSAPAAPIFDLMXXXXXXXXXXXXXXXXXXXXXXXXYDHSLEKYYKKAISIF 540 PSSDTLEVSSAPAAPIFDLM YDHSLEKYYKKAISIF Sbjct: 121 PSSDTLEVSSAPAAPIFDLMSNSNTASDNDNDDDNSNRITNNRSYDHSLEKYYKKAISIF 180 Query: 541 KQPXXXXXXXXXXXXXXXXXXXXXXXISTNFAQRSGRLIESHNGFHYFVGSSSMTLFGLE 720 KQP ISTNFAQRSGRLIESHNGFHYFVGSSSMTLFGLE Sbjct: 181 KQPANANGENGNGANGHEDDDEDDEEISTNFAQRSGRLIESHNGFHYFVGSSSMTLFGLE 240 Query: 721 IQSLVTKYISVKNFRPLPINTKNKILNSNLNPAXXXXXXXXXXXXXXXXXXXPISTIVNL 900 IQSLVTKYISVKNFRPLPINTKNKILNSNLNPA PISTIVNL Sbjct: 241 IQSLVTKYISVKNFRPLPINTKNKILNSNLNPAISSFINSNNYLFSSYNFLNPISTIVNL 300 Query: 901 NSINDNLSPLMFKIILKSDTDGSSGQEEVIQFQLPSYNYTKLLIDCFINYNDGCFYFFNE 1080 NSINDNLSPLMFKIILKSDTDGSSGQEEVIQFQLPSYNYTKLLIDCFINYNDGCFYFFNE Sbjct: 301 NSINDNLSPLMFKIILKSDTDGSSGQEEVIQFQLPSYNYTKLLIDCFINYNDGCFYFFNE 360 Query: 1081 GLVKCGINKLYLENKWLYYDNTKKALDNENDPILQAVWFCKILLILAVGEMYLGSINNEM 1260 GLVKCGINKLYLENKWLYYDNTKKALDNENDPILQAVWFCKILLILAVGEMYLGSINNEM Sbjct: 361 GLVKCGINKLYLENKWLYYDNTKKALDNENDPILQAVWFCKILLILAVGEMYLGSINNEM 420 Query: 1261 LKNYSNQPKLPGSKFFQMGSKIFNCLFSSERLENVTKKGGIEVLLLYAFFLQVADYTLAS 1440 LKNYSNQPKLPGSKFFQMGSKIFNCLFSSERLENVTKKGGIEVLLLYAFFLQVADYTLAS Sbjct: 421 LKNYSNQPKLPGSKFFQMGSKIFNCLFSSERLENVTKKGGIEVLLLYAFFLQVADYTLAS 480 Query: 1441 YFYFGQALRTCLILGLHVDSQSDTLSRYEIEHHRRLWWTVYMFERMLSSKAGLPLSFTDY 1620 YFYFGQALRTCLILGLHVDSQSDTLSRYEIEHHRRLWWTVYMFERMLSSKAGLPLSFTDY Sbjct: 481 YFYFGQALRTCLILGLHVDSQSDTLSRYEIEHHRRLWWTVYMFERMLSSKAGLPLSFTDY 540 Query: 1621 TISTALPADIDDETIEEKNSHYVFRKAELISNCVTIVKINAQILSKLYQRQPETNIIITL 1800 TISTALPADIDDETIEEKNSHYVFRKAELISNCVTIVKINAQILSKLYQRQPETNIIITL Sbjct: 541 TISTALPADIDDETIEEKNSHYVFRKAELISNCVTIVKINAQILSKLYQRQPETNIIITL 600 Query: 1801 KVVIKQLLEWRNNLSDSLQVDFTQKDEDFKISRLSTNMFTEYFQGINLAVRPLLFHFASI 1980 KVVIKQLLEWRNNLSDSLQVDFTQKDEDFKISRLSTNMFTEYFQGINLAVRPLLFHFASI Sbjct: 601 KVVIKQLLEWRNNLSDSLQVDFTQKDEDFKISRLSTNMFTEYFQGINLAVRPLLFHFASI 660 Query: 1981 QLKRFKTSNTFVNLQNYSATISSLLTCSLHASVNTIRSLWSLLQNSMLAMFSYMDREYLF 2160 QLKRFKTSNTFVNLQNYSATISSLLTCSLHASVNTIRSLWSLLQNSMLAMFSYMDREYLF Sbjct: 661 QLKRFKTSNTFVNLQNYSATISSLLTCSLHASVNTIRSLWSLLQNSMLAMFSYMDREYLF 720 Query: 2161 TSSCTLLLFNTAFGIHEQTLYHLDHSLEIFTQMRNLGNIPAGLRRAQLLTLMANLDFHGI 2340 TSSCTLLLFNTAFGIHEQTLYHLDHSLEIFTQMRNLGNIPAGLRRAQLLTLMANLDFHGI Sbjct: 721 TSSCTLLLFNTAFGIHEQTLYHLDHSLEIFTQMRNLGNIPAGLRRAQLLTLMANLDFHGI 780 Query: 2341 MNDLITKYNDILKFDSMNCENDNIVEDSNEPKRETEKCKPHKDGDRIDPSIIDCDKSNTN 2520 MNDLITKYNDILKFDSMNCENDNIVEDSNEPKRETEKCKPHKDGDRIDPSIIDCDKSNTN Sbjct: 781 MNDLITKYNDILKFDSMNCENDNIVEDSNEPKRETEKCKPHKDGDRIDPSIIDCDKSNTN 840 Query: 2521 TNMIKNESISNIVSILPEGAKPTLTDYSXXXXXXXXXXXXXSEPSTFFDIITASLENSYQ 2700 TNMIKNESISNIVSILPEGAKPTLTDYS SEPSTFFDIITASLENSYQ Sbjct: 841 TNMIKNESISNIVSILPEGAKPTLTDYSNGNNDVNDINVNNSEPSTFFDIITASLENSYQ 900 Query: 2701 TTLTEKGSQVMEKNMDQLDSVHXXXXXXXXXXXXXXGNIDHSDEKLWKEITDQAMWLGNT 2880 TTLTEKGSQVMEKNMDQLDSVH GNIDHSDEKLWKEITDQAMWLGNT Sbjct: 901 TTLTEKGSQVMEKNMDQLDSVHNLNDDDLQQLLEDLGNIDHSDEKLWKEITDQAMWLGNT 960 Query: 2881 MDPTAAAGSEIDFTDYLGP 2937 MDPTAAAGSEIDFTDYLGP Sbjct: 961 MDPTAAAGSEIDFTDYLGP 979 >gi|2554806|pdb|1AJY|A Chain A, Structure And Mobility Of The Put3 Dimer: A Dna Pincer, Nmr, 13 Structures gi|2554807|pdb|1AJY|B Chain B, Structure And Mobility Of The Put3 Dimer: A Dna Pincer, Nmr, 13 Structures Length = 71 Score = 147 bits (372), Expect = 7e-34 Identities = 70/70 (100%), Positives = 70/70 (100%) Frame = +1 Query: 91 SVACLSCRKRHIKCPGGNPCQKCVTSNAICEYLEPSKKIVVSTKYLQQLQKDLNDKTEEN 270 SVACLSCRKRHIKCPGGNPCQKCVTSNAICEYLEPSKKIVVSTKYLQQLQKDLNDKTEEN Sbjct: 2 SVACLSCRKRHIKCPGGNPCQKCVTSNAICEYLEPSKKIVVSTKYLQQLQKDLNDKTEEN 61 Query: 271 NRLKALLLER 300 NRLKALLLER Sbjct: 62 NRLKALLLER 71 >gi|3660288|pdb|1ZME|C Chain C, Crystal Structure Of Put3DNA COMPLEX gi|3660289|pdb|1ZME|D Chain D, Crystal Structure Of Put3DNA COMPLEX Length = 70 Score = 147 bits (372), Expect = 7e-34 Identities = 70/70 (100%), Positives = 70/70 (100%) Frame = +1 Query: 91 SVACLSCRKRHIKCPGGNPCQKCVTSNAICEYLEPSKKIVVSTKYLQQLQKDLNDKTEEN 270 SVACLSCRKRHIKCPGGNPCQKCVTSNAICEYLEPSKKIVVSTKYLQQLQKDLNDKTEEN Sbjct: 1 SVACLSCRKRHIKCPGGNPCQKCVTSNAICEYLEPSKKIVVSTKYLQQLQKDLNDKTEEN 60 Query: 271 NRLKALLLER 300 NRLKALLLER Sbjct: 61 NRLKALLLER 70 >gi|19114517|ref|NP_593605.1| putative regulatory protein; zinc finger [Schizosaccharomyces pombe] gi|7492894|pir||T38690 probable regulatory protein - fission yeast (Schizosaccharomyces pombe) gi|2462679|emb|CAB16735.1| putative regulatory protein; zinc finger [Schizosaccharomyces pombe] Length = 783 Score = 104 bits (259), Expect = 9e-21 Identities = 101/400 (25%), Positives = 170/400 (42%), Gaps = 5/400 (1%) Frame = +1 Query: 1000 LPSYNYTKLLIDCFINYNDGCFYFFNEGLVKCGINKLYLENKWLYYDNTKKALDNENDPI 1179 LP + LI F + F+FF+E L++ +N + + +P Sbjct: 255 LPPPEVSDFLIKSFYGHVQANFFFFHETLLRYRLNLIM----------------SFQNPS 298 Query: 1180 LQAVWFCKILLILAVGEMYLGSINNEMLKNYSNQPKLPGSKFFQMGSKIFNCLFSSERLE 1359 + + C +++I A+G M+ + +++ SN PG +FF + + Sbjct: 299 VDPGFLCLLMMIFALGSMFA----HMEIRSASNPFDNPGKQFFDTARLLLPQVIQQ---- 350 Query: 1360 NVTKKGGIEVLLLYAFFLQVADYTLASYFYFGQALRTCLILGLHVDSQSDTLSRYEIEHH 1539 K ++ +L +LQ +SY YFG +L + GLH ++ + E Sbjct: 351 --CKPSLVQASILMGLYLQSTLSQKSSYTYFGLSLSAAVANGLHRSCENPNIDPKTKELR 408 Query: 1540 RRLWWTVYMFERMLSSKAGLPLSFTDYTISTALPADIDDETIEEKNSHYVFRKAELISNC 1719 RLWW+VY +R++S G PLS D ALP + + IE S+ I + Sbjct: 409 NRLWWSVYTMDRLISIATGRPLSIADSECDAALPTVVPELEIEGSASN-----VHNIISM 463 Query: 1720 VTIVKINAQILSKLY----QRQPETNIIITLKVVIKQLLEWRNNLSDSLQVDFTQKDEDF 1887 I KI + + +LY ++ NII +L+ L EW+ +L Q+ D + Sbjct: 464 SKIAKIMGKTMEQLYGTVNYKKNPINIIESLRA---DLEEWKRSL-PPFQI-LENLDAED 518 Query: 1888 KISRLSTNMFTEYFQGINLAVRPLLFHFASIQLKRFKTSNTFVNLQNYSATISSLLTCSL 2067 + R + ++ Y Q I + RP+L H ++K K S + C L Sbjct: 519 PLFRANVHLHMTYDQAIIIMSRPVLLH----KMKNAKNSPRVDRINE---------DCIL 565 Query: 2068 HASVNTIRSLWSLLQN-SMLAMFSYMDREYLFTSSCTLLL 2184 A + SL LLQN S L+ +S+ D Y F+S+ +LL Sbjct: 566 AA--RHLISLVHLLQNHSQLSCYSFFDYNYTFSSALVVLL 603 Score = 51.2 bits (121), Expect = 9e-05 Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%) Frame = +1 Query: 67 PQKRQQRSSVACLSCRKRHIKCPGGNPCQKCVTSNAICEY-LEPSKKIVVSTKYLQQLQK 243 P +R++R +AC +C+ R ++C G NPC+ C ++N C Y ++ K++ S Y L K Sbjct: 29 PMERRRRVVLACFNCKARKVRCDGANPCKACASNNLECTYPVKDEKEMDYSKDYFIDLSK 88 >gi|6322061|ref|NP_012136.1| Gcn5 INdependent; Gin1p [Saccharomyces cerevisiae] gi|731872|sp|P40467|YIN0_YEAST Putative 108.8 kDa transcriptional regulatory protein in FKH1-STH1 intergenic region gi|626324|pir||S48404 probable membrane protein YIL130w - yeast (Saccharomyces cerevisiae) gi|557793|emb|CAA86148.1| orf, len: 964, CAI: 0.15, possible regulatory protein [Saccharomyces cerevisiae] Length = 964 Score = 85.5 bits (210), Expect = 4e-15 Identities = 106/463 (22%), Positives = 194/463 (41%), Gaps = 17/463 (3%) Frame = +1 Query: 1216 LAVGEMYLGSINNEMLKNYSNQPKL---PGSKFFQMGSKIFNCLFSSERLENVTKKGGIE 1386 +AVG ++ SI + N S++ K G K+F K+ + + N I+ Sbjct: 299 IAVGALFSKSI----VSNDSSREKFLQDEGYKYFIAARKLID-------ITNARDLNSIQ 347 Query: 1387 VLLLYAFFLQVADYTLASYFYFGQALRTCLILGLHVD-SQSDTLSRYEIEHHRRLWWTVY 1563 +L+ FLQ + Y Y G A+R+ L G H S + S EIE +RL++T+Y Sbjct: 348 AILMLIIFLQCSARLSTCYTYIGVAMRSALRAGFHRKLSPNSGFSPIEIEMRKRLFYTIY 407 Query: 1564 MFERMLSSKAGLPLSFTDYTISTALPADIDDETIEE-----KNSHYVFRKAELISNCVTI 1728 + +++ GLP S + LP D+ DE I E +N H V + + + Sbjct: 408 KLDVYINAMLGLPRSISPDDFDQTLPLDLSDENITEVAYLPENQHSVLSSTGISNEHTKL 467 Query: 1729 VKINAQILSKLYQRQPETNIII--TLKVVIKQLLEWRNNLSDSLQVDFTQKDEDFKISRL 1902 I +I+S+LY + +NII T+ + +L W ++L L + D +++ R Sbjct: 468 FLILNEIISELYPIKKTSNIISHETVTSLELKLRNWLDSLPKELIPNAENIDPEYE--RA 525 Query: 1903 STNMFTEYFQGINLAVRPLLFHFASIQLKRFKTSNTFVNLQNYSATISSLLTCSLHASVN 2082 + + + + RP + H+ S + N +N S+ + Sbjct: 526 NRLLHLSFLHVQIILYRPFI-HYLSRNM----------NAENVDPLCYRRARNSIAVART 574 Query: 2083 TIRSLWSLLQNSMLAMFSYMDREYLFTSSCTLLLFNTAFGIHEQTLYHLDHSLEIFTQMR 2262 I+ ++ N++L + +F S LL F IHE L D + E + ++ Sbjct: 575 VIKLAKEMVSNNLLTGSYWYACYTIFYSVAGLL-----FYIHEAQLPDKDSAREYYDILK 629 Query: 2263 NLGNIPAGLRRAQLLTL----MANLDFHGIMNDLITKYND-ILKFDSMNCENDNIVEDSN 2427 + A R+ L+ L MA + ++N + K N ++ +++ N E + Sbjct: 630 D-----AETGRSVLIQLKDSSMAASRTYNLLNQIFEKLNSKTIQLTALHSSPSN--ESAF 682 Query: 2428 EPKRETEKCKPHKDGDRIDPSIIDCDKSNTNT-NMIKNESISN 2553 + KPH GD + P + + N+ ++ K+E +N Sbjct: 683 LVTNNSSALKPHL-GDSLQPPVFFSSQDTKNSFSLAKSEESTN 724 Score = 42.4 bits (98), Expect = 0.043 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +1 Query: 76 RQQRSSVACLSCRKRHIKCPGGNPCQKCVTSNAICEYLEPSKK 204 +++R + AC CRK+ +KC G PC C + C Y +P+K+ Sbjct: 13 KRRRVTRACDECRKKKVKCDGQQPCIHCTVYSYECTYKKPTKR 55 >gi|21913144|gb|AAK84946.1| transcriptional activator Mut3p [Pichia angusta] Length = 929 Score = 76.6 bits (187), Expect = 2e-12 Identities = 74/319 (23%), Positives = 140/319 (43%), Gaps = 20/319 (6%) Frame = +1 Query: 1111 YLENKWLYYDNTKKALDNENDPILQAVWFCKILLILAVGEMYLGSINNEMLKNYSNQPKL 1290 ++E+ YD N+ L V+ ++A G ++L S +E N Sbjct: 296 FIEDLNELYDTDPSQYTNKQQRFLPLVYS-----VMACGALFLKS--DEQTNGSKNGEPT 348 Query: 1291 PGSKFFQMGSKIFNCLFSSERLENVTKKG---GIEVLLLYAFFLQVADYTLASYFYFGQA 1461 P ++ F+ + + ++ +L ++T GI+ +++ FLQ + Y Y G A Sbjct: 349 PENEVFE--DEGYRYFIAARKLIDITDTRDTYGIQTIVMLIIFLQCSARLSTCYAYIGIA 406 Query: 1462 LRTCLILGLHVDSQSDTLSRYEIEHHRRLWWTVYMFERMLSSKAGLPLSFTDYTISTALP 1641 LR L GLH + E+E +RL+WT+Y + +++ GLP + ++ +P Sbjct: 407 LRAALREGLH-RKLDYPFNPIELEIRKRLFWTIYKMDIYVNTMLGLPRTISEDDFDQDMP 465 Query: 1642 ADIDDETIEEKNSHYVFRKAELISNCVT-----IVKINAQILSKLYQ---------RQPE 1779 ++DDE I + + L S+ + ++ I +I++KLY R+PE Sbjct: 466 IELDDENITVDGYRFEKQGDRLSSSGIANAHTRLIFIMKKIVTKLYPIKPRKIENGRRPE 525 Query: 1780 T---NIIITLKVVIKQLLEWRNNLSDSLQVDFTQKDEDFKISRLSTNMFTEYFQGINLAV 1950 +I+ L++ L +W N+L L+ + K +RL + Y + Sbjct: 526 LMTHDIVYQLEI---DLQDWMNSLPLELKPGVEPSSQYLKANRL---LHISYLHVKIILY 579 Query: 1951 RPLLFHFASIQLKRFKTSN 2007 RP + + +S + R K+SN Sbjct: 580 RPFIHYLSSDHVNRPKSSN 598 Score = 38.1 bits (87), Expect = 0.81 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = +1 Query: 73 KRQQRSSVACLSCRKRHIKCPGGNPCQKCVTSNAICEYLEPSK 201 ++++R AC CRK IKC G PC C + C Y +PS+ Sbjct: 64 QKKRRVVRACDRCRKLKIKCSGDLPCIHCTVYSYECTYDQPSR 106 >gi|19075786|ref|NP_588286.1| putative zinc-finger protein [Schizosaccharomyces pombe] gi|7493181|pir||T41344 probable zinc-finger protein - fission yeast (Schizosaccharomyces pombe) gi|4107286|emb|CAA22655.1| putative zinc-finger protein [Schizosaccharomyces pombe] Length = 767 Score = 76.3 bits (186), Expect = 3e-12 Identities = 80/353 (22%), Positives = 146/353 (41%), Gaps = 3/353 (0%) Frame = +1 Query: 1198 CKILLILAVGEMYLGSINNEMLKNYSNQP-KLPGSKFFQMGSKIFNCLFSSERLENVTKK 1374 C +LL +A+G ++ + E L + ++ PGS+F+Q +F + S LE V Sbjct: 333 CMLLLSMAMGSLFSYIRHPEFLSDENHDRWTYPGSQFYQNAKLLFPKVISESSLETV--- 389 Query: 1375 GGIEVLLLYAFFLQVADYTLASYFYFGQALRTCLILGLHVDSQSDTLSRYEIEHHRRLWW 1554 + L +L Y YFG A+R + G+H S + S E +RL+W Sbjct: 390 ---QSFFLAGMYLSPTLAHEVVYMYFGIAMRAAVANGMHKKSANAQFSGDVAELRKRLFW 446 Query: 1555 TVYMFERMLSSKAGLPLSFTDYTISTALPADIDDETIEEKNSHYVFRKAELISNCVTIVK 1734 +VY ER + G P S I P E+++ +N FR L + I Sbjct: 447 SVYCMERKIGISLGRPESLVRSEIDIHFPE--YRESLDSQNFIASFRTFTL---AIKISL 501 Query: 1735 INAQILSKLYQR-QPETNI-IITLKVVIKQLLEWRNNLSDSLQVDFTQKDEDFKISRLST 1908 + ++ Y + N+ T+K ++ ++ WR LS L++ D + R Sbjct: 502 LTNKVYDMWYSSLHGKANLKAATIKEIVNEIEAWRQQLSPDLEIQ--NIGPDSRSYRGIV 559 Query: 1909 NMFTEYFQGINLAVRPLLFHFASIQLKRFKTSNTFVNLQNYSATISSLLTCSLHASVNTI 2088 ++ Y RP L H + KT + L++ ++++ + Sbjct: 560 HLHLAYHIVRIAMGRPFLLHRLRERTMNSKTD------EGARLLTDKLISYCYSSALHIV 613 Query: 2089 RSLWSLLQNSMLAMFSYMDREYLFTSSCTLLLFNTAFGIHEQTLYHLDHSLEI 2247 L L + L+++S+MD +S ++L + EQT+ L+ +++I Sbjct: 614 DLLVLLRMHKFLSVYSFMDYHSCHAAS-FIILVHLLINPSEQTIEQLNTAIDI 665 Score = 36.6 bits (83), Expect = 2.4 Identities = 17/68 (25%), Positives = 33/68 (48%) Frame = +1 Query: 100 CLSCRKRHIKCPGGNPCQKCVTSNAICEYLEPSKKIVVSTKYLQQLQKDLNDKTEENNRL 279 C+ C+K IKC G PC +C+ C P + ++ + LQ+ + +T + + Sbjct: 117 CVECKKHKIKCVGNFPCGRCLKKGLECVIETPPRLLMNKDEISLNLQRLSHMETILSKLM 176 Query: 280 KALLLERP 303 ++ L+ P Sbjct: 177 PSMSLDLP 184 >gi|2808662|emb|CAA11374.1| PrnA protein [Aspergillus nidulans] Length = 818 Score = 74.7 bits (182), Expect = 8e-12 Identities = 86/392 (21%), Positives = 164/392 (41%), Gaps = 20/392 (5%) Frame = +1 Query: 1102 NKLYLENKWLYYDNTKKALDNENDPILQAVWFCKILLILAVGEMYLGSINNEMLKNYSNQ 1281 N Y+E WL ++ + A C IL++LA+G + + + + +++ Sbjct: 242 NNFYVEEDWLKDKLNTCYVNPGSLGCNDAGAVCSILMVLAIGTQFAHMESATPVNHLTSE 301 Query: 1282 PKL-----PGSKFFQMGSKIFNCLFSSERLENVTKKGGIEVLLLYAFFLQVADYTLASYF 1446 G F+Q SK+ + +S + +V + LL +L D + Y Sbjct: 302 ADHFSEDEVGLTFYQFASKLLPDIIASASIRSV------QACLLIGTYLLPLDTSGLCYT 355 Query: 1447 YFGQALRTCLILGLHVDSQSDTLSRYEIEHHRRLWWTVYMFERMLSSKAGLPLSFTDYTI 1626 YFG AL+ + G+H + L + IE R++WT Y E+ +S G P+S +D + Sbjct: 356 YFGLALKMAIQNGMHRKYSGEGLPPHVIEIRNRVFWTAYTIEKRVSILHGRPVSLSDTDV 415 Query: 1627 STALPADIDDETIEEKNSHYVFRKAELISNCVTIVKINAQI---------LSKLYQRQPE 1779 A+P D + S++ +N VT++K+ ++ L K + Q + Sbjct: 416 DAAMPVDFPGLMPHGQVSNH--------TNMVTLIKLTLKLGEVSNEICALRKCRKNQ-Q 466 Query: 1780 TNIIITLKVVIKQLLEWRNNLSDSLQVDFTQKDEDFKISRLSTNMFTEYFQGINLAVRPL 1959 + + L + K L++W N L + + D + + + R + ++ +Y RP Sbjct: 467 QDCLERLLTLRKHLVDWWNTLPE--ETDCRDLNPNGPLFRANVHLKLDYCLTRIFLGRPF 524 Query: 1960 LFHFASIQLKRFKTSNTFVN------LQNYSATISSLLTCSLHASVNTIRSLWSLLQNSM 2121 LF +K F ++ ++ S S+L+T + A++ I L + Sbjct: 525 LFS----SMKGFSSATFQISPVKAPMSSGVSKNRSTLVTDCVEAALEIIDLCRLLRDETG 580 Query: 2122 LAMFSYMDREYLFTSSCTLLLFNTAFGIHEQT 2217 LA S+ + F+S LL A + ++T Sbjct: 581 LARASFTE----FSSCRAALLVILAQSLTKRT 608 Score = 37.0 bits (84), Expect = 1.8 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +1 Query: 70 QKRQQRSSVACLSCRKRHIKCPGGNPCQKCVTSNAICEYLEPSK 201 ++ ++R+ AC CR+ KC GG PC++C C + P + Sbjct: 20 EENRKRAVRACDGCRRVKEKCEGGVPCRRCTRYRRQCVFTHPDQ 63 >gi|730941|sp|P36598|THI1_SCHPO Thiamine repressible genes regulatory protein thi1 (Transcription factor ntf1) gi|542217|pir||S41962 thiamin repressible genes regulatory protein thi1 [imported] - fission yeast (Schizosaccharomyces pombe) gi|453452|emb|CAA54648.1| thi1 [Schizosaccharomyces pombe] Length = 775 Score = 73.6 bits (179), Expect = 2e-11 Identities = 85/397 (21%), Positives = 160/397 (40%), Gaps = 2/397 (0%) Frame = +1 Query: 1000 LPSYNYTKLLIDCFINYNDGCFYFFNEGLVKCGINKLYLENKWLYYDNTKKALDNENDPI 1179 +PS + LI+ F + ++ KC + +++L A++N+ D Sbjct: 240 IPSKAVVEFLINSFFINVQTNLFVYHPHFFKCRL-EIFL------------AMENQID-- 284 Query: 1180 LQAVWFCKILLILAVGEMYLGSINNEMLKNYSNQPKLPGSKFFQMGSKIFNCLFSSERLE 1359 A + C +L++LA G Y ++ K+ + + G++ F IF + + Sbjct: 285 --AGFLCILLMVLAFGNQYTAEQQEDVSKSNFHASNI-GNRLFSAALSIFPLVLLQSDVS 341 Query: 1360 NVTKKGGIEVLLLYAFFLQVADYTLASYFYFGQALRTCLILGLHVDSQSDTLSRYEIEHH 1539 V LL +LQ Y +S+ YFG A++ + LGLH +S +L++ E Sbjct: 342 AVQSS------LLIGLYLQSTIYEKSSFAYFGLAIKFAVALGLHKNSDDPSLTQNSKELR 395 Query: 1540 RRLWWTVYMFERMLSSKAGLPLSFTDYTISTALPADIDDETIEEKNSHYVFRKAELISNC 1719 RL W+V+ +R +S G S IS P + D +E S + + N Sbjct: 396 NRLLWSVFCIDRFVSMTTGRRPSIPLECISIPYPVILPD--LEIPGSQSIVENMRAVIN- 452 Query: 1720 VTIVKINAQILSKLYQRQPET--NIIITLKVVIKQLLEWRNNLSDSLQVDFTQKDEDFKI 1893 + K+ +I LY + + + +++ + +L W+++L S V F + + Sbjct: 453 --LAKLTNEICDSLYWNPSPSFESQVNSVRRIYARLELWKSDLHSS--VVFDESAVQHPL 508 Query: 1894 SRLSTNMFTEYFQGINLAVRPLLFHFASIQLKRFKTSNTFVNLQNYSATISSLLTCSLHA 2073 R + ++ Y I L R I +K+ K + + Y + + + Sbjct: 509 FRSNAHVQMIYDNAIMLTTR-------VIMVKKLKDKDLTAENRRY-------IQLCVES 554 Query: 2074 SVNTIRSLWSLLQNSMLAMFSYMDREYLFTSSCTLLL 2184 + I LL + L+ S+ F S+ LLL Sbjct: 555 ATRVINIAHLLLTHKCLSSLSFFGLHVPFASAPILLL 591 Score = 53.9 bits (128), Expect = 1e-05 Identities = 23/59 (38%), Positives = 36/59 (61%) Frame = +1 Query: 67 PQKRQQRSSVACLSCRKRHIKCPGGNPCQKCVTSNAICEYLEPSKKIVVSTKYLQQLQK 243 P ++++R AC CR++ IKC GG PC C T N C Y + S+ +S +YL++L + Sbjct: 28 PPEQRRRVFRACKHCRQKKIKCNGGQPCISCKTLNIECVYAQKSQNKTLSREYLEELSE 86 >gi|499202|gb|AAA19010.1| transcription factor Length = 728 Score = 72.8 bits (177), Expect = 3e-11 Identities = 85/397 (21%), Positives = 160/397 (40%), Gaps = 2/397 (0%) Frame = +1 Query: 1000 LPSYNYTKLLIDCFINYNDGCFYFFNEGLVKCGINKLYLENKWLYYDNTKKALDNENDPI 1179 +PS + LI+ F + ++ KC + +++L A++N+ D Sbjct: 240 IPSKAVVEFLINSFFINVQTNLFVYHPHFFKCRL-EIFL------------AMENQID-- 284 Query: 1180 LQAVWFCKILLILAVGEMYLGSINNEMLKNYSNQPKLPGSKFFQMGSKIFNCLFSSERLE 1359 A + C +L++LA G Y ++ K+ + + G++ F IF + + Sbjct: 285 --AGFLCILLMVLAFGNQYTAEQQEDVSKSNFHASNI-GNRLFLRALSIFPLVLLQSDVS 341 Query: 1360 NVTKKGGIEVLLLYAFFLQVADYTLASYFYFGQALRTCLILGLHVDSQSDTLSRYEIEHH 1539 V LL +LQ Y +S+ YFG A++ + LGLH +S +L++ E Sbjct: 342 AVQSS------LLIGLYLQSTIYEKSSFAYFGLAIKFAVALGLHKNSDDPSLTQNSKELR 395 Query: 1540 RRLWWTVYMFERMLSSKAGLPLSFTDYTISTALPADIDDETIEEKNSHYVFRKAELISNC 1719 RL W+V+ +R +S G S IS P + D +E S + + N Sbjct: 396 NRLLWSVFCIDRFVSMTTGRRPSIPLECISIPYPVILPD--LEIPGSQSIVENMRAVIN- 452 Query: 1720 VTIVKINAQILSKLYQRQPET--NIIITLKVVIKQLLEWRNNLSDSLQVDFTQKDEDFKI 1893 + K+ +I LY + + + +++ + +L W+++L S V F + + Sbjct: 453 --LAKLTNEICDSLYWNPSPSFESQVNSVRRIYARLELWKSDLHSS--VVFDESAVQHPL 508 Query: 1894 SRLSTNMFTEYFQGINLAVRPLLFHFASIQLKRFKTSNTFVNLQNYSATISSLLTCSLHA 2073 R + ++ Y I L R I +K+ K + + Y + + + Sbjct: 509 FRSNAHVQMIYDNAIMLTTR-------VIMVKKLKDKDLTAENRRY-------IQLCVES 554 Query: 2074 SVNTIRSLWSLLQNSMLAMFSYMDREYLFTSSCTLLL 2184 + I LL + L+ S+ F S+ LLL Sbjct: 555 ATRVINIAHLLLTHKCLSSLSFFGLHVPFASAPILLL 591 Score = 53.9 bits (128), Expect = 1e-05 Identities = 23/59 (38%), Positives = 36/59 (61%) Frame = +1 Query: 67 PQKRQQRSSVACLSCRKRHIKCPGGNPCQKCVTSNAICEYLEPSKKIVVSTKYLQQLQK 243 P ++++R AC CR++ IKC GG PC C T N C Y + S+ +S +YL++L + Sbjct: 28 PPEQRRRVFRACKHCRQKKIKCNGGQPCISCKTLNIECVYAQKSQNKTLSREYLEELSE 86 >gi|19112113|ref|NP_595321.1| putative transcriptional activator with fungal binuclear cluster domain [Schizosaccharomyces pombe] gi|7491695|pir||T40524 hypothetical protein SPBC530.08 - fission yeast (Schizosaccharomyces pombe) gi|3150255|emb|CAA19174.1| putative transcriptional activator with fungal binuclear cluster domain [Schizosaccharomyces pombe] Length = 815 Score = 67.0 bits (162), Expect = 2e-09 Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 11/273 (4%) Frame = +1 Query: 1183 QAVWFCKILLILAVGEMYLGSINNEMLKNYSNQPKLPGSKFFQMGSKIFNCLFSSERL-- 1356 Q +F L IL VG + +L N SN ++ S I F SERL Sbjct: 262 QGNFFPLFLSILCVGYYH------HLLNNPSNT---------ELQSLIKKYSFYSERLVK 306 Query: 1357 --ENVTKKGGIEVLLLYAFFLQVADYTLASYFYFGQALRTCLILGLHVDSQSDTLSRYEI 1530 +N T + I+ LL+ + + A+++Y L CL LGLH + ++ + +I Sbjct: 307 SADNFTIES-IQCLLILSIYRYCRTEISAAWYYMKLGLNCCLRLGLHRNI-TEGFTEEQI 364 Query: 1531 EHHRRLWWTVYMFERMLSSKAGLPLSFTDYTISTALPA--DIDDETIEEKNSHYVFRKAE 1704 + RR++W +Y ++R L + G PL D I LP T E N+ F Sbjct: 365 DSRRRIFWAIYCYDRQLCTLFGFPLGVRDEDIDQCLPVTPKFPSVTEIEANARLFF---- 420 Query: 1705 LISNCVTIVKINAQILSKLYQRQPETNIIITLK----VVIKQLLEWRNNLSDSL-QVDFT 1869 + V + KI+++IL+KLY +T K VI+ L + + +SL +V Sbjct: 421 --FHGVKLYKISSRILTKLYSPNSRN---VTKKHISYAVIQDLEQLLDGFYNSLPRVFRA 475 Query: 1870 QKDEDFKISRLSTNMFTEYFQGINLAVRPLLFH 1968 ++ +F+ + N+ Y+ L RPLL + Sbjct: 476 EQPGEFQANHFFYNLQLVYYSFRMLIYRPLLHY 508 Score = 45.8 bits (107), Expect = 0.004 Identities = 23/73 (31%), Positives